Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001541-TA|BGIBMGA001541-PA|IPR013026|Tetratricopeptide
region, IPR001440|Tetratricopeptide TPR_1
(154 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical ... 61 3e-10
AC084153-4|AAK84598.2| 836|Caenorhabditis elegans Hypothetical ... 47 5e-06
U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small glutamine... 47 7e-06
Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical pr... 45 2e-05
Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical pr... 45 2e-05
AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical ... 42 1e-04
U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of hsp70... 38 0.003
AF303269-1|AAG50227.1| 266|Caenorhabditis elegans Hsp70-interac... 38 0.003
U29096-3|AAA68407.1| 961|Caenorhabditis elegans Uncoordinated p... 35 0.022
AF034085-1|AAD01976.1| 961|Caenorhabditis elegans UNC-45 protein. 35 0.022
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 33 0.12
AF043693-3|AAB97537.1| 207|Caenorhabditis elegans Hypothetical ... 33 0.12
AF016427-4|AAB65353.1| 774|Caenorhabditis elegans Hypothetical ... 32 0.16
U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc... 32 0.21
U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac... 32 0.21
U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac... 32 0.21
Z66494-10|CAF31472.1| 500|Caenorhabditis elegans Hypothetical p... 31 0.48
Z66494-9|CAA91260.1| 502|Caenorhabditis elegans Hypothetical pr... 31 0.48
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 31 0.48
Z66512-3|CAA91325.1| 179|Caenorhabditis elegans Hypothetical pr... 30 0.63
U10401-9|AAA19054.3| 787|Caenorhabditis elegans Hypothetical pr... 28 3.4
U97408-3|AAB93343.1| 339|Caenorhabditis elegans Hypothetical pr... 27 4.4
U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical p... 27 5.9
Z92849-5|CAB07430.1| 163|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z81467-4|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z81467-3|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z73098-9|CAA97335.1| 141|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z71266-10|CAA95838.3| 491|Caenorhabditis elegans Hypothetical p... 27 7.8
Z70205-6|CAH60748.1| 421|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z49130-5|CAA88968.1| 395|Caenorhabditis elegans Hypothetical pr... 27 7.8
U64598-8|AAQ82848.1| 396|Caenorhabditis elegans Hypothetical pr... 27 7.8
U29488-9|AAA68778.1| 342|Caenorhabditis elegans Hypothetical pr... 27 7.8
AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein. 27 7.8
AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein. 27 7.8
>AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical
protein R09E12.3 protein.
Length = 320
Score = 61.3 bits (142), Expect = 3e-10
Identities = 31/85 (36%), Positives = 46/85 (54%)
Query: 7 PTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQD 66
P +E K KGNE K G + A+ HY +A+K DP N IL+SNR+ KL + +L D
Sbjct: 137 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDD 196
Query: 67 ANETVRLQPQWAKNPFSMVAFSMAL 91
+ +RL ++ K A +A+
Sbjct: 197 CDTCIRLDSKFIKGYIRKAACLVAM 221
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/92 (21%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 17 GNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQ 76
GN K F +A +HY +AI++DP+N ++N++ + + + +Q + V + +
Sbjct: 12 GNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRE 71
Query: 77 WAKNPFSMVAFSMALSGLGFVVGKTTTMMSSW 108
+ + ++A +M+ +G F ++ W
Sbjct: 72 -TRADYKLIAKAMSRAGNAFQKQNDLSLAVQW 102
>AC084153-4|AAK84598.2| 836|Caenorhabditis elegans Hypothetical
protein Y22D7AL.9 protein.
Length = 836
Score = 47.2 bits (107), Expect = 5e-06
Identities = 25/70 (35%), Positives = 40/70 (57%)
Query: 10 VEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANE 69
+E++ + DG++ EA Y +A++ P N ILH+N S LK+ +L+ A
Sbjct: 5 LEKVVHEAGSAYSDGRYQEARELYEKALRDHPKNGILHANLSAILLKIQLPPEALKHAEI 64
Query: 70 TVRLQPQWAK 79
+V+L PQWAK
Sbjct: 65 SVKLCPQWAK 74
>U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small
glutamine-rich tetratricorepeat protein protein 1
protein.
Length = 337
Score = 46.8 bits (106), Expect = 7e-06
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 12 ELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETV 71
+LK +GN+ +K +F AV Y AIK++ + + NR+ A+ +L+Q+ L++QD +
Sbjct: 107 KLKEEGNDLMKASQFEAAVQKYNAAIKLN-RDPVYFCNRAAAYCRLEQYDLAIQDCRTAL 165
Query: 72 RLQPQWAK 79
L P ++K
Sbjct: 166 ALDPSYSK 173
>Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 45.2 bits (102), Expect = 2e-05
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 2 DEAKKPTTVE-----ELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLK 56
D AK+ T E E + K E +G F A+ H+T AI+ +P + +LH+ R+ LK
Sbjct: 102 DSAKEATEDEIEKASEERGKAQEAFSNGDFDTALTHFTAAIEANPGSAMLHAKRANVLLK 161
Query: 57 LDQHYLSLQDANETVRLQPQWAK 79
L + ++ D ++ + + P A+
Sbjct: 162 LKRPVAAIADCDKAISINPDSAQ 184
>Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 45.2 bits (102), Expect = 2e-05
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 2 DEAKKPTTVE-----ELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLK 56
D AK+ T E E + K E +G F A+ H+T AI+ +P + +LH+ R+ LK
Sbjct: 102 DSAKEATEDEIEKASEERGKAQEAFSNGDFDTALTHFTAAIEANPGSAMLHAKRANVLLK 161
Query: 57 LDQHYLSLQDANETVRLQPQWAK 79
L + ++ D ++ + + P A+
Sbjct: 162 LKRPVAAIADCDKAISINPDSAQ 184
>AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical
protein Y39B6A.2 protein.
Length = 496
Score = 42.3 bits (95), Expect = 1e-04
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 13 LKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVR 72
+K + N+ KD + A Y+ AI++ P +L+ NR+ A+LK + + +L+DA+ +
Sbjct: 32 IKDEANQFFKDQVYDVAADLYSVAIEIHPTA-VLYGNRAQAYLKKELYGSALEDADNAIA 90
Query: 73 LQPQWAKNPFSMVAFSMAL 91
+ P + K + +MAL
Sbjct: 91 IDPSYVKGFYRRATANMAL 109
>U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of
hsp70-interacting protein(chip family) protein 1
protein.
Length = 266
Score = 37.9 bits (84), Expect = 0.003
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 11 EELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANET 70
E+ G +C + ++ +AV HY++AIK++P + NR+ + +L+ ++ +D
Sbjct: 6 EQHNTNGKKCYMNKRYDDAVDHYSKAIKVNPLPK-YYQNRAMCYFQLNNLKMTEEDCKRA 64
Query: 71 VRLQPQWAK 79
+ L P K
Sbjct: 65 LELSPNEVK 73
>AF303269-1|AAG50227.1| 266|Caenorhabditis elegans
Hsp70-interacting protein protein.
Length = 266
Score = 37.9 bits (84), Expect = 0.003
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 11 EELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANET 70
E+ G +C + ++ +AV HY++AIK++P + NR+ + +L+ ++ +D
Sbjct: 6 EQHNTNGKKCYMNKRYDDAVDHYSKAIKVNPLPK-YYQNRAMCYFQLNNLKMTEEDCKRA 64
Query: 71 VRLQPQWAK 79
+ L P K
Sbjct: 65 LELSPNEVK 73
>U29096-3|AAA68407.1| 961|Caenorhabditis elegans Uncoordinated
protein 45 protein.
Length = 961
Score = 35.1 bits (77), Expect = 0.022
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 9 TVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPN-----NYILHSNRSFAFLKLD 58
T EE++ +GN VKD +I+A YT+A+++ + +L+ NR+ A LK D
Sbjct: 7 TAEEIRDEGNAAVKDQDYIKADELYTEALQLTTDEDKALRPVLYRNRAMARLKRD 61
>AF034085-1|AAD01976.1| 961|Caenorhabditis elegans UNC-45
protein.
Length = 961
Score = 35.1 bits (77), Expect = 0.022
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 9 TVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPN-----NYILHSNRSFAFLKLD 58
T EE++ +GN VKD +I+A YT+A+++ + +L+ NR+ A LK D
Sbjct: 7 TAEEIRDEGNAAVKDQDYIKADELYTEALQLTTDEDKALRPVLYRNRAMARLKRD 61
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 32.7 bits (71), Expect = 0.12
Identities = 14/61 (22%), Positives = 32/61 (52%)
Query: 17 GNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQ 76
G++ + +F +A+ Y AI++DP +Y R+ +L + + ++ D + L+P
Sbjct: 33 GSQFLARAQFADALTQYHAAIELDPKSYQAIYRRATTYLAMGRGKAAIVDLERVLELKPD 92
Query: 77 W 77
+
Sbjct: 93 F 93
>AF043693-3|AAB97537.1| 207|Caenorhabditis elegans Hypothetical
protein C34B2.5 protein.
Length = 207
Score = 32.7 bits (71), Expect = 0.12
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 2 DEAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPN-----NYILHSNRSFAFLK 56
DE + T V+ LK +GN +G+F +A Y +AI P IL SN + A +K
Sbjct: 10 DEEDQITKVDSLKKEGNNFFANGEFEKANEKYQEAIASCPPTSTEVQSILLSNSAAALIK 69
Query: 57 LDQHYLSLQDANETVRL 73
L + +++ A++++ +
Sbjct: 70 LRKWESAVEAASKSIEI 86
>AF016427-4|AAB65353.1| 774|Caenorhabditis elegans Hypothetical
protein F32D1.3 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.16
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 7 PTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHY-LSLQ 65
PT ++ L+ N + +E+ Y + ++ PN+Y H+N A L L+Q Y L+L+
Sbjct: 684 PTHLDSLQGIANLLQQTQNHVESETFYRKVMEAQPNSYAAHANYG-AILHLNQKYDLALK 742
Query: 66 DANETVRLQP 75
+ + L P
Sbjct: 743 EYEIALILDP 752
>U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc
transferase protein.
Length = 1151
Score = 31.9 bits (69), Expect = 0.21
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 22 KDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQWA 78
+ GK +A+LHY +AI++ P +SN ++ ++ N +++ P +A
Sbjct: 477 QQGKLNDAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSSAAIACYNRAIQINPAFA 533
Score = 27.1 bits (57), Expect = 5.9
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 17 GNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQ 76
GN + F AV Y +A+ + N+ ++H N + + + L++ + + LQP
Sbjct: 336 GNVLKEARIFDRAVSAYLRALNLSGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIDLQPH 395
Query: 77 WAKNPFSMVAFSMALSGLGFVV 98
+ P + + AL G VV
Sbjct: 396 F---PDAYCNLANALKEKGSVV 414
>U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform b protein.
Length = 973
Score = 31.9 bits (69), Expect = 0.21
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 22 KDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQWA 78
+ GK +A+LHY +AI++ P +SN ++ ++ N +++ P +A
Sbjct: 299 QQGKLNDAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSSAAIACYNRAIQINPAFA 355
Score = 27.1 bits (57), Expect = 5.9
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 17 GNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQ 76
GN + F AV Y +A+ + N+ ++H N + + + L++ + + LQP
Sbjct: 158 GNVLKEARIFDRAVSAYLRALNLSGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIDLQPH 217
Query: 77 WAKNPFSMVAFSMALSGLGFVV 98
+ P + + AL G VV
Sbjct: 218 F---PDAYCNLANALKEKGSVV 236
>U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform a protein.
Length = 1151
Score = 31.9 bits (69), Expect = 0.21
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 22 KDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQWA 78
+ GK +A+LHY +AI++ P +SN ++ ++ N +++ P +A
Sbjct: 477 QQGKLNDAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSSAAIACYNRAIQINPAFA 533
Score = 27.1 bits (57), Expect = 5.9
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 17 GNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQ 76
GN + F AV Y +A+ + N+ ++H N + + + L++ + + LQP
Sbjct: 336 GNVLKEARIFDRAVSAYLRALNLSGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIDLQPH 395
Query: 77 WAKNPFSMVAFSMALSGLGFVV 98
+ P + + AL G VV
Sbjct: 396 F---PDAYCNLANALKEKGSVV 414
>Z66494-10|CAF31472.1| 500|Caenorhabditis elegans Hypothetical
protein C34C6.6b protein.
Length = 500
Score = 30.7 bits (66), Expect = 0.48
Identities = 28/130 (21%), Positives = 60/130 (46%), Gaps = 10/130 (7%)
Query: 3 EAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYL 62
EA TT+ + ++G+ +++G A+L Y A++ DP + A + ++ L
Sbjct: 209 EANPFTTMSDPLMEGDNLMRNGDIGNAMLAYEAAVQKDPQDARAWCKLGLAHAENEKDQL 268
Query: 63 SLQDANETVRLQPQWAKNPFSMVAFSMALSGLGF---VVGKTTTMMSSWSAGRSLQ---- 115
++Q + +++ A N +++ S++ + G + + MSS+ S Q
Sbjct: 269 AMQAFQKCLQID---AGNKEALLGLSVSQANEGMENEALHQLDKWMSSYLGSNSTQVTTT 325
Query: 116 PPVDLGYNDS 125
PP+ + DS
Sbjct: 326 PPLYSSFLDS 335
>Z66494-9|CAA91260.1| 502|Caenorhabditis elegans Hypothetical
protein C34C6.6a protein.
Length = 502
Score = 30.7 bits (66), Expect = 0.48
Identities = 28/130 (21%), Positives = 60/130 (46%), Gaps = 10/130 (7%)
Query: 3 EAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYL 62
EA TT+ + ++G+ +++G A+L Y A++ DP + A + ++ L
Sbjct: 211 EANPFTTMSDPLMEGDNLMRNGDIGNAMLAYEAAVQKDPQDARAWCKLGLAHAENEKDQL 270
Query: 63 SLQDANETVRLQPQWAKNPFSMVAFSMALSGLGF---VVGKTTTMMSSWSAGRSLQ---- 115
++Q + +++ A N +++ S++ + G + + MSS+ S Q
Sbjct: 271 AMQAFQKCLQID---AGNKEALLGLSVSQANEGMENEALHQLDKWMSSYLGSNSTQVTTT 327
Query: 116 PPVDLGYNDS 125
PP+ + DS
Sbjct: 328 PPLYSSFLDS 337
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 30.7 bits (66), Expect = 0.48
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 17 GNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQ 76
GN + ++ +A+ HY +AI+++P Y R+ +L + L D + + +P
Sbjct: 31 GNALFVNRQYSDALTHYHKAIELNPTMYQAIFRRATTYLAFGRSKPGLADLDTVLSQKPD 90
Query: 77 WA 78
+A
Sbjct: 91 FA 92
>Z66512-3|CAA91325.1| 179|Caenorhabditis elegans Hypothetical
protein F52H3.5 protein.
Length = 179
Score = 30.3 bits (65), Expect = 0.63
Identities = 16/62 (25%), Positives = 35/62 (56%)
Query: 12 ELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETV 71
+L+ +G + + EA+ +T+A+++ P N ++NR+ A+ ++ +L D NE +
Sbjct: 45 QLEREGVALAEGVRLDEAIEKFTKALEVCPKNPSAYNNRAQAYRLQNKPEKALDDLNEAL 104
Query: 72 RL 73
L
Sbjct: 105 SL 106
>U10401-9|AAA19054.3| 787|Caenorhabditis elegans Hypothetical
protein T20B12.1 protein.
Length = 787
Score = 27.9 bits (59), Expect = 3.4
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 17 GNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQP 75
G+ + D KF EA H +++++ P N + KL+ S Q + V LQP
Sbjct: 474 GHLLLMDKKFEEAYKHLRRSLELQPIQLGTWFNAGYCAWKLENFKESTQCYHRCVSLQP 532
>U97408-3|AAB93343.1| 339|Caenorhabditis elegans Hypothetical
protein F48A9.1 protein.
Length = 339
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 121 GYNDSSQEKEDVIPERKNKYSKAQARQRY 149
GY D ++ E++ ERK + + Q R+RY
Sbjct: 217 GYEDRRKDTEELRDERKRENEQNQNRERY 245
>U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical
protein C34D4.1 protein.
Length = 512
Score = 27.1 bits (57), Expect = 5.9
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 100 KTTTMMSSWSAGRSLQPPVDLGYNDSSQEKEDVIPERKNKYSKAQARQR 148
K MM G L P D + + Q+KE I E+K K KA A Q+
Sbjct: 244 KDQEMMQMSMFGSKLNKPSDAHHKEWLQKKEREIREKKAK-EKAAAEQK 291
>Z92849-5|CAB07430.1| 163|Caenorhabditis elegans Hypothetical
protein H12D21.6 protein.
Length = 163
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 88 SMALSGLGFVVGKTTTMMSSWSAGRSLQPPVDLGYNDSSQEKEDVIPERKNKYSKAQARQ 147
S L+GL F++ +T + PP ++ + EKE ++P+ K K + +
Sbjct: 3 STKLAGLIFLIALSTAAPQK-KTNVTRPPP-----SEKTVEKEQIVPQNSEKLEKTEKSE 56
Query: 148 RYKQ 151
R +Q
Sbjct: 57 RTRQ 60
>Z81467-4|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical protein
C12C8.3b protein.
Length = 1143
Score = 26.6 bits (56), Expect = 7.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 7 PTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYIL----HSNRSFAFLKLDQHYL 62
P + E+K+ G+E DG F+ Q + +DP +IL +NR F D ++
Sbjct: 1012 PRNMSEMKVYGSEGDGDGMFVR-----PQGVVIDPEGHILVCDSRNNRVQVFASDDMRFI 1066
>Z81467-3|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical protein
C12C8.3a protein.
Length = 1147
Score = 26.6 bits (56), Expect = 7.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 7 PTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYIL----HSNRSFAFLKLDQHYL 62
P + E+K+ G+E DG F+ Q + +DP +IL +NR F D ++
Sbjct: 1016 PRNMSEMKVYGSEGDGDGMFVR-----PQGVVIDPEGHILVCDSRNNRVQVFASDDMRFI 1070
>Z73098-9|CAA97335.1| 141|Caenorhabditis elegans Hypothetical
protein T21C9.8 protein.
Length = 141
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 9 TVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHS 48
T+ + K+ DG F HYT+ MDP I HS
Sbjct: 52 TIYDTKLDSTRTSYDGTF-RVSGHYTKVFDMDPKVNIYHS 90
>Z71266-10|CAA95838.3| 491|Caenorhabditis elegans Hypothetical
protein R06C7.7 protein.
Length = 491
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 13 LKIKGNECVKDGKFIEAVLH 32
L + NECVK+G E V+H
Sbjct: 48 LTVNFNECVKEGVIFETVVH 67
>Z70205-6|CAH60748.1| 421|Caenorhabditis elegans Hypothetical
protein C11H1.9a protein.
Length = 421
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 28 EAVLHYTQAIKMDPNNY 44
+A + +T AIK+DPNNY
Sbjct: 261 DAEITFTGAIKIDPNNY 277
>Z49130-5|CAA88968.1| 395|Caenorhabditis elegans Hypothetical
protein T06D8.5 protein.
Length = 395
Score = 26.6 bits (56), Expect = 7.8
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 62 LSLQDANETVRLQ-PQWAKNPFSMVAFSMALSGLGFVVGKTTTMMSSWSAGRSLQPPVDL 120
+S++D ++ R + W M ++AL G+ + +M++ W R+++PP
Sbjct: 38 ISVKDVDDKSRKRIGWWLMGCAGMCYGAVALGGVTRLTESGLSMVN-WDLFRTMKPPFGQ 96
Query: 121 GYNDSSQEKEDVIPERKNKYSKAQ 144
+ EK PE K K S +
Sbjct: 97 KQWEEEFEKYKAYPEYKYKSSSEE 120
>U64598-8|AAQ82848.1| 396|Caenorhabditis elegans Hypothetical
protein C52B9.2b protein.
Length = 396
Score = 26.6 bits (56), Expect = 7.8
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Query: 55 LKLDQHYLSLQDANETVRLQPQWAKNPFSMVAFSMALSGLGFVVGKTTTMMSSWSAGRSL 114
L DQ L L N + A N + A +GL FV+ T + W G
Sbjct: 264 LLTDQELLKLNGPNRLIAFLADLAMNEKAGRALHWTGNGLEFVIVNTKLVSKLW--GNRK 321
Query: 115 QPPVDLGYNDSSQEKED 131
+ D+ Y+ S+ D
Sbjct: 322 RNTKDMNYSKLSRAMRD 338
>U29488-9|AAA68778.1| 342|Caenorhabditis elegans Hypothetical
protein C56C10.10 protein.
Length = 342
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 1 MDEAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAI 37
+DE K +VE L+ KGNE + EA+ Y A+
Sbjct: 182 LDEDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDAL 218
>AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein.
Length = 1147
Score = 26.6 bits (56), Expect = 7.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 7 PTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYIL----HSNRSFAFLKLDQHYL 62
P + E+K+ G+E DG F+ Q + +DP +IL +NR F D ++
Sbjct: 1016 PRNMSEMKVYGSEGDGDGMFVR-----PQGVVIDPEGHILVCDSRNNRVQVFASDDMRFI 1070
>AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein.
Length = 1143
Score = 26.6 bits (56), Expect = 7.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 7 PTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYIL----HSNRSFAFLKLDQHYL 62
P + E+K+ G+E DG F+ Q + +DP +IL +NR F D ++
Sbjct: 1012 PRNMSEMKVYGSEGDGDGMFVR-----PQGVVIDPEGHILVCDSRNNRVQVFASDDMRFI 1066
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.129 0.370
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,890,270
Number of Sequences: 27539
Number of extensions: 145060
Number of successful extensions: 333
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 292
Number of HSP's gapped (non-prelim): 49
length of query: 154
length of database: 12,573,161
effective HSP length: 76
effective length of query: 78
effective length of database: 10,480,197
effective search space: 817455366
effective search space used: 817455366
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 56 (26.6 bits)
- SilkBase 1999-2023 -