Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001540-TA|BGIBMGA001540-PA|IPR006935|Type III
restriction enzyme, res subunit
(1032 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55538| Best HMM Match : zf-BED (HMM E-Value=1.4) 599 e-171
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 167 4e-41
SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064) 128 2e-29
SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 3e-24
SB_5916| Best HMM Match : R3H (HMM E-Value=2.9e-10) 110 6e-24
SB_36660| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 6e-23
SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 5e-20
SB_3481| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1) 85 4e-16
SB_56273| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 6e-14
SB_47951| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 2e-13
SB_6010| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 1e-12
SB_44103| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 2e-12
SB_56108| Best HMM Match : Kelch_2 (HMM E-Value=3.7) 64 4e-10
SB_13949| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-09
SB_35262| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 3e-07
SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09) 54 8e-07
SB_25920| Best HMM Match : DUF1193 (HMM E-Value=2.2) 52 2e-06
SB_41548| Best HMM Match : ResIII (HMM E-Value=0.27) 49 2e-05
SB_19368| Best HMM Match : DEAD (HMM E-Value=4) 48 4e-05
SB_47275| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.073
SB_10193| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.39
SB_31309| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.39
SB_57422| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.90
SB_3314| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.90
SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2) 31 3.6
SB_5452| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.6
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.4
>SB_55538| Best HMM Match : zf-BED (HMM E-Value=1.4)
Length = 1108
Score = 599 bits (1478), Expect = e-171
Identities = 268/348 (77%), Positives = 310/348 (89%)
Query: 593 VICTTCVGAGDPRVARMRFQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVM 652
VICTTCVGAGDPR+++ RF+++LIDE Q+TEPECMVPVVLG +QLILVGDHCQLGPVVM
Sbjct: 529 VICTTCVGAGDPRLSKFRFRTVLIDESTQATEPECMVPVVLGCKQLILVGDHCQLGPVVM 588
Query: 653 CKKAAKAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERR 712
CKKAA AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPS+ FY+G+LQNGV+ ER+
Sbjct: 589 CKKAANAGLSQSLFERLVVLGIRPIRLQVQYRMHPVLSEFPSNLFYDGTLQNGVTLAERQ 648
Query: 713 LHKIDFPWPRPDRPMFFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQIG 772
+DFPWP PD+PMFFY T GQEEIA SGTSYLNRTEAANVEK+ TRFL+AG++PEQIG
Sbjct: 649 QPGVDFPWPIPDKPMFFYTTMGQEEIASSGTSYLNRTEAANVEKIVTRFLRAGIKPEQIG 708
Query: 773 IITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIG 832
+ITPYEGQR+Y+VQ+MQ+ GSLHA LY E+EVASVDAFQGREKD II+SCVRSNEHQGIG
Sbjct: 709 VITPYEGQRAYIVQYMQFSGSLHANLYMEVEVASVDAFQGREKDYIILSCVRSNEHQGIG 768
Query: 833 FLSDPRRLNVALTRAKYGLIVVGNPKVLSKQPLWNHLLAFYKERRVLTEGPLSNLKESAI 892
FL+DPRRLNVALTRAKYG+IV+GNPK+LS+QPLWNHLL +YKE + L EGPL+NLKES I
Sbjct: 769 FLNDPRRLNVALTRAKYGIIVIGNPKILSRQPLWNHLLNYYKENKALVEGPLNNLKESMI 828
Query: 893 QFAKPKKLVNSQNPGSHFMSTSMFDAREAMVPGSIYDRARPPRDPLAY 940
QF+KP+KLVN NPG FMST+MFDAREA++PG +YDR P DP A+
Sbjct: 829 QFSKPRKLVNRTNPGGRFMSTTMFDAREALIPGGVYDRQIPRMDPAAF 876
Score = 548 bits (1352), Expect = e-155
Identities = 272/460 (59%), Positives = 332/460 (72%), Gaps = 52/460 (11%)
Query: 2 SVEAFDPSSQSLTFLETEEGDFIGADTQGSEFEFTDFTLPSQSQTQ--ASQHDHG----- 54
+VE++ P+SQ+LTFL+TEE DF GADTQGSE+EF DFT+PSQ+QTQ ASQ +
Sbjct: 3 TVESYGPASQTLTFLDTEEADF-GADTQGSEYEFHDFTVPSQTQTQSQASQPEPNQPIVL 61
Query: 55 ----LSSSNQV--NGIGRIELSSKISNVTNTIPELQFEEEDEALYSNKELPDHACKYCGI 108
+ V NG E +S V N++ EL FEEE++ + K+LP HAC+YCGI
Sbjct: 62 NGTVIEKKENVLANGPANSEAKDGVSKVANSLGELNFEEEEDETFYQKDLPAHACRYCGI 121
Query: 109 HDPATVVMCNICNKWFCNGRGNTSGSHIINHLVRAKHKEAALHRDGPLGETLLECYSCGA 168
HDPA+VVMC C KWFCNGRGNTSGSHIINHLVRAKHKE LH+DGPLGET+LECY+C
Sbjct: 122 HDPASVVMCIQCKKWFCNGRGNTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYNCTC 181
Query: 169 RNVFVLGFIPAKADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLISDRAFLSWLVKVPSE 228
RNVF+LGFIPAKADSVVVLLCR DQ QW+PLI+DR FLSWLVKVP +
Sbjct: 182 RNVFLLGFIPAKADSVVVLLCR--------------DQTQWQPLINDRCFLSWLVKVPPD 227
Query: 229 TEQMRARQVTPQQIGRLEELWRDNVDATFQDLEKPGVDEEPHQVLLRYEDGYQYQNIFGP 288
+Q+RARQ++ QQI +LEELW+D+ DA +DL+KPGVD+EP VLLRYED YQYQNIFGP
Sbjct: 228 EDQLRARQISAQQINKLEELWKDSPDAKLEDLDKPGVDDEPQLVLLRYEDAYQYQNIFGP 287
Query: 289 LVKLEADYDKRLKESQTQEGIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVG 348
LVKLEADYDKRLKESQTQ I VRWD+GLNKK IA+FT KT+ +M+LM GDELRLRY+G
Sbjct: 288 LVKLEADYDKRLKESQTQGDIVVRWDIGLNKKRIAFFTFPKTNDEMRLMQGDELRLRYLG 347
Query: 349 EMHKAWSGVGHVIKVPDNYGDDVGLELKSGAGAPLDCTSNFVVDFIWKSTSFDRMQLALR 408
E+HK W GVGHVIK+P++ + + +W RMQ ++
Sbjct: 348 ELHKPWQGVGHVIKIPNSIHYN-------------------ITKRVW-----CRMQAGMK 383
Query: 409 KFALDDSSVSGYIYRRLLGHEVEEVLFRVHLPKHFSAPNL 448
FA+D++SVSGY+Y +LLGHEVEE + + LPK + NL
Sbjct: 384 TFAVDETSVSGYVYHKLLGHEVEEQMVKCQLPKRYRTMNL 423
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 167 bits (406), Expect = 4e-41
Identities = 145/455 (31%), Positives = 220/455 (48%), Gaps = 54/455 (11%)
Query: 448 LPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVRQN----GGPVLVCAPS 503
+P L+ Q +AV+ AL PL+++ G PGTGK+ T+ I V QN G VL+CAP+
Sbjct: 2148 VPGLDDDQAHAVRTALTHPLTMVYGQPGTGKSWTAVAIACHFVNQNRADAAGHVLLCAPT 2207
Query: 504 NTAVDQLTEKIHRT-GLKVVRLCAKSREAME---SSVSFLALHEQAR--------ALGSA 551
A+D ++E + + G++ VR+ +K E S S LALH + R AL S
Sbjct: 2208 ERALDVVSELLLQVPGIRAVRIYSKQAETTVIDGSGHSNLALHMRVRHASNPHSKALLSC 2267
Query: 552 DSELRKLTR--------LKEEAGEL---SXXXXXXXXXXXXXXXXXXXXXXXVICTTCVG 600
++E+ +LT+ K+E + S +I TC
Sbjct: 2268 EAEISRLTQELTSCTDPTKQERTQHKLDSKRQKYNTILATAEGFELGETPVDIIICTCAE 2327
Query: 601 AGDPRV-ARMRFQSILIDEGMQSTEPECMVPVVL-GAR--QLILVGDHCQLGPVVMCKKA 656
AG R+ ++DE EPE +VP V G R + +LVGDH QL PV+ K+A
Sbjct: 2328 AGSQRMRTHANIAQCIVDESNYCLEPEVLVPAVTAGPRCSRFVLVGDHKQLVPVLQSKEA 2387
Query: 657 AKAGLSQSLFERLVVL----GIRPFRLEVQYRMHPELSRFPSDFFY--EGSLQNGVSAEE 710
K GL +SLFE L L Q+RMHP L +F S FFY + S +N +A
Sbjct: 2388 WKLGLGRSLFEDLWEAHREGSSACCTLNTQHRMHPSLGKFSSSFFYNVQQSRENVSNACA 2447
Query: 711 RRLHKIDFPWPRPDRPMFFYVTQGQE---EIAGSGTSYLNRTEAANVEKLTTRFLKAGVR 767
R L +P R +F +V E + G S N E V ++ + GV+
Sbjct: 2448 RELEGF-WPAGRDLYHVFCHVEDEPESDCDYIEGGMS--NDAEVQKVVEVVESLMSRGVQ 2504
Query: 768 PEQIGIITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVR--- 824
P +I I++P+ QR ++ + +L ++L +I + S + QG + D++++S VR
Sbjct: 2505 PFKIWIVSPFLRQRHSILHAL--DSTLGSQL--DIRLTSPEECQGAQCDVLVLSTVRGRP 2560
Query: 825 ----SNEHQGIGFLSDPRRLNVALTRAKYGLIVVG 855
+ H G G L D ++NV LTRA+ GL++VG
Sbjct: 2561 RDQLTGPHGGFGCLGDKHQMNVVLTRARKGLVIVG 2595
Score = 124 bits (300), Expect = 3e-28
Identities = 154/540 (28%), Positives = 222/540 (41%), Gaps = 85/540 (15%)
Query: 445 APNLPDLNRSQVYAVKHALQ---RPLSLIQGPPGTGKTVTSATIVYQLVRQNGGP----- 496
AP+ P LN+ Q A+ H L RP LI GP GTGKT T A V +L R + G
Sbjct: 352 APH-PILNKPQATALSHILDPRPRPPLLIFGPFGTGKTRTIAEAVKELCRLHAGNTAANL 410
Query: 497 -VLVCAPSNTAVDQ-LTEKIHRTGLKVVRLCAKSREAMESSVSFLALHEQARALGSADSE 554
+L+C SN+A D + + +H S E L + + R L S
Sbjct: 411 RILICTHSNSAADHYIVDYLHPF--------VTSSEIGPFLCRPLRICWEHRFLSSVSHT 462
Query: 555 LRKLTRLKEEAGELSXXXXXXXXXXXXXXXXXXXXXXXVICTTCVGAGDPRVARMRFQSI 614
+ K + E G + V V G P F +
Sbjct: 463 VLKYCLIDRETGRFAIPSRQDIDCVSVIVTTL------VTADVLVKMGLPSGY---FSHV 513
Query: 615 LIDEGMQSTEPECMVPVVLGAR--QLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 672
IDE Q+ E E ++P+ L + +++L GDH Q+G V A + L +SL RL L
Sbjct: 514 FIDEAAQAMEAETLIPLCLTQQSTRIVLAGDHLQMGAHVFSPVARRLCLDRSLLVRLYEL 573
Query: 673 GIRP----FRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRPMF 728
R L YR + ++ PS FYEG+L A + R ++P +
Sbjct: 574 YPRESDSKLLLLENYRAYNDIVEIPSKLFYEGTL----IAHKHRPEGSEYP-------IR 622
Query: 729 FYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKA-------GVRPEQIGIITPYEGQR 781
F+ G+EE A SY N EAA V + +K V +I ++TPY Q
Sbjct: 623 FHGVLGREERAVDRASYYNMAEAAEVSERVEELVKQWRGEDAEDVELRRICVLTPYTAQV 682
Query: 782 SYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSN--------EHQGIGF 833
+ Q L E+ V SV+ QG E D + +S V + ++ +GF
Sbjct: 683 REIRQ------LLRRSQLGEVRVESVNNVQGLEFDALFISTVHTAFGLTPEMLDNHHLGF 736
Query: 834 LSDPRRLNVALTRAKYGLIVVGNPKVL-----------------SKQPLWNHLLAFYKER 876
LSDPR LN A+TRAKY L +VG+P L S+ +N+ L F K
Sbjct: 737 LSDPRLLNTAVTRAKYHLTIVGDPNALCGAGKCKACWKIIFSKCSEHGTFNYRLPFDKVM 796
Query: 877 RVLTEGPLSNLKESAIQFAKPKKLVNSQNPGSHFMSTSMFDAREAMVPGSIYDRARPPRD 936
+ LT + + S I + K L N + S +T + DA + S DR+ R+
Sbjct: 797 KSLTFPRVDDTSTSGISIKQQKPLTNGAD--SEPRATQLLDATWPSLSSSESDRSGTSRN 854
>SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064)
Length = 1064
Score = 128 bits (310), Expect = 2e-29
Identities = 141/471 (29%), Positives = 199/471 (42%), Gaps = 58/471 (12%)
Query: 453 RSQVYAVKHALQRPLS-LIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPSNTAVDQLT 511
R V ++ RP LI GPPGTGKT+T + Q++ + V V
Sbjct: 538 RQAVVSIVKGTSRPHPYLIFGPPGTGKTITVVESIKQVMINHESGNKVTRKDEGRVVTSK 597
Query: 512 EKI---HRTGL-KVVRLCAKSRE---AMESSVSFLALHEQARALGSADSELRKLTRLKEE 564
EK+ H + + +V+ + S+ A +S + L L + ++ +L
Sbjct: 598 EKLRILHESDVFQVLHVFPNSKVLACAPSNSAADLILERVMKHNVIPKMKMLRLNAFGRS 657
Query: 565 AGELSXXXXXXXXXXXXXXXX----XXXXXXXVICTTCVGAG---DPRVARMRFQSILID 617
LS V+CT V AG + F + ID
Sbjct: 658 YASLSDSIKVVSCIHDGDFFFPGKEEIMNKRLVVCTL-VTAGRLVSADIPDTHFTHVFID 716
Query: 618 EGMQSTEPECMVPVV-------LGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLV 670
E Q+ EPECMVP+ G QL+L GD QLGPV+ A K GL SL ERL+
Sbjct: 717 ESGQALEPECMVPLAGLLNPENPGGGQLVLAGDPQQLGPVLRSPLAIKYGLRMSLLERLM 776
Query: 671 V---------------LG-IRPF---RLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEER 711
LG P +L YR HP + P+ FY+ L+ +R
Sbjct: 777 TRVAAYGRITEDEEDELGEYEPAMLTKLLKNYRSHPAILELPNGMFYDDELETCADKLKR 836
Query: 712 RLHKIDFPWPRPDRPMFFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKA-GVRP-- 768
P P+ F G++ G S+ N EAA V K + GVR
Sbjct: 837 ESLCNWSKLPTKGFPILFDGVLGKDLREGKSPSFFNPEEAATVVKHIKDLRDSRGVRVLM 896
Query: 769 EQIGIITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEH 828
+IG+I+PY Q S + Q LH I+V SV+ FQG E+ +II+S VRS++
Sbjct: 897 AEIGVISPYRQQVSKIRQ------LLHKNNITGIKVGSVEEFQGDERRVIIISTVRSSQE 950
Query: 829 Q-------GIGFLSDPRRLNVALTRAKYGLIVVGNPKVLSKQPLWNHLLAF 872
+GFL++ +R NVA+TRA+ LIVVGNP VL K W + +
Sbjct: 951 FLKMDAQFKLGFLNNRKRFNVAITRAQALLIVVGNPHVLCKDSHWGRFIHY 1001
>SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2077
Score = 111 bits (267), Expect = 3e-24
Identities = 91/289 (31%), Positives = 142/289 (49%), Gaps = 18/289 (6%)
Query: 593 VICTTCVGAGDPR--VARMRFQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPV 650
VI T GA R + ++ + I+++E + E + + G + LIL+GDH QL P
Sbjct: 1446 VIGMTTTGAAKYREVLQEIKPRIIIVEEAAEVLEAHIVTALSPGCQHLILIGDHEQLRPN 1505
Query: 651 VMCKKAAK-AGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAE 709
K AK L SLFER+V + L Q+RM PE+S+ + + L+N
Sbjct: 1506 PTVYKLAKDYHLDISLFERVVNNKMHLECLRKQHRMRPEISQMLQHIYPD--LEN----H 1559
Query: 710 ERRLHKIDFPWPRPDRPMFFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPE 769
E L+ + + +FF Q +EE G S N EA V L + G
Sbjct: 1560 ESVLNFDNIKGVSTN--IFFIDHQEREEFIEEGRSRSNIHEAKFVAALCRYLILQGYERS 1617
Query: 770 QIGIITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQ 829
+I ++T Y GQ +Q + + + + V++VD FQG E DII++S VRSN+
Sbjct: 1618 KITVLTMYTGQL------LQLKKEMPKDFFNGVRVSAVDNFQGEENDIILLSLVRSNDDG 1671
Query: 830 GIGFLSDPRRLNVALTRAKYGLIVVGNPKVL-SKQPLWNHLLAFYKERR 877
IGFL R+ VAL+RA+ G +GN ++ K+ LW +L ++++
Sbjct: 1672 NIGFLRISNRVCVALSRARKGFYCIGNMGLMEEKEELWKKILDDLRQKK 1720
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 396 KSTSFDRMQLALRKFALDDSSVSGYIYRRLLGHEVEEVLFRVHLPKHFSAPNLPDLNRSQ 455
K T F R++L +R + + +YR L H V R+ + + +L++SQ
Sbjct: 808 KYTIFVRVRLIVRLYTNHEEYFDVSLYRFAL-HTV-----RILDTNSWPNAHALNLDKSQ 861
Query: 456 VYAVKHALQRPLSLIQGPPGTGKT 479
+ AV+ AL + ++IQGPPGTGKT
Sbjct: 862 LRAVQTALTKEFAVIQGPPGTGKT 885
>SB_5916| Best HMM Match : R3H (HMM E-Value=2.9e-10)
Length = 798
Score = 110 bits (264), Expect = 6e-24
Identities = 84/225 (37%), Positives = 111/225 (49%), Gaps = 19/225 (8%)
Query: 611 FQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLV 670
F ++IDE Q+ E C +P+ L A + IL GDH QL P ++ KAAK GL +L ER+V
Sbjct: 73 FDLVVIDEAAQALEASCWIPL-LRAPRCILAGDHHQLPPTIISPKAAKDGLEVTLMERVV 131
Query: 671 -VLGIRPFR-LEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPR-PDR-- 725
LG + L QYRMH + ++ SD Y G L VS L D P R D
Sbjct: 132 HQLGEKVVHMLTTQYRMHEAIMKWSSDQLYNGRLDAHVSVATHLL--CDLPNIRNTDETR 189
Query: 726 -PMFFYVTQGQEEIAGSGTSYL---NRTEAANVEKLTTRFLKAGVRPEQIGIITPYEGQR 781
P+ T G + + L N EA V T + AG+ P I +I PY Q
Sbjct: 190 LPLLMIDTAGCDVLEMEVEDELSKGNEGEADIVTAHVTALIDAGLNPRDIAVIAPYNLQV 249
Query: 782 SYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSN 826
L Q + + + +EV SVD FQGREK+ +I+S VRSN
Sbjct: 250 ELLRQRL-------SPSHPAVEVKSVDGFQGREKEAVILSLVRSN 287
Score = 40.7 bits (91), Expect = 0.006
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 826 NEHQGIGFLSDPRRLNVALTRAKYGLIVVGNPKVLSKQPLWNHLLAFYKER 876
N + +GFL++ RR+NVA+TRA+ L ++ + + +S P L+ + E+
Sbjct: 376 NMQREVGFLAEDRRINVAITRARRHLAIICDSETVSHHPFLRSLVDYMSEK 426
>SB_36660| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1021
Score = 107 bits (256), Expect = 6e-23
Identities = 74/208 (35%), Positives = 104/208 (50%), Gaps = 22/208 (10%)
Query: 678 RLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPW---PRPDRPMFFYVTQG 734
+L YR HP L R PS FY L+ V AE ++ W P P+ F+ +G
Sbjct: 69 KLVNNYRSHPSLLRLPSALFYHSELR--VCAERTMREQLS-QWEMLPTQGTPLVFHGLKG 125
Query: 735 QEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRP---EQIGIITPYEGQRSYLVQHMQYQ 791
++ G+ S+ N EA V + + P +GIITPY+ Q + +
Sbjct: 126 EDMREGNRPSWFNPVEAVQVVRYVQALKNSATCPIKLADLGIITPYKKQVEKIRLLLSRV 185
Query: 792 GSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQ-------GIGFLSDPRRLNVAL 844
G E++V SV+ FQG+E+ II+S VRS E IGFL +P+R NVA+
Sbjct: 186 G------IDEVKVGSVEEFQGQERPAIIISTVRSTEAMVGFDVAHTIGFLDNPKRFNVAV 239
Query: 845 TRAKYGLIVVGNPKVLSKQPLWNHLLAF 872
TRA+ L+VVGNP VL + P W LL +
Sbjct: 240 TRAQSLLVVVGNPHVLCRDPYWCSLLQY 267
>SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2578
Score = 97.5 bits (232), Expect = 5e-20
Identities = 79/273 (28%), Positives = 122/273 (44%), Gaps = 17/273 (6%)
Query: 614 ILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKA-GLSQSLFERLVVL 672
++++E + EP + + + LIL+GDH QL P V + K SL ERLV
Sbjct: 939 VIVEEAAEILEPSLLAALTPQLQHLILIGDHKQLRPNVDTYELTKDFDFDVSLMERLVKS 998
Query: 673 GIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRPMFFYVT 732
L Q RM PE S D Y N + + P D+ MFF+
Sbjct: 999 NFPYKTLAKQNRMRPEFSALLKDI-YPNLKDNLPRVSQNK------PLECLDKSMFFWTH 1051
Query: 733 QGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQIGIITPYEGQRSYLVQHMQYQG 792
E+ + T N EA V L L +G +P ++ ++ Y GQ L M+
Sbjct: 1052 NHPEKKERTIT---NEEEADMVASLVLYLLSSGCKPNEVTVLAAYSGQVKILRGKMKKHR 1108
Query: 793 SLHAKLY---QEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTRAKY 849
+ +L+ +++ V ++D +QG E +++S VR NE +GFLS R VA +RA+
Sbjct: 1109 IDYPELHPNDEQVTVQTIDMYQGDENKYVVVSLVRCNEIGNVGFLSKINRRCVAQSRAQC 1168
Query: 850 GLIVVGNPKVL---SKQPLWNHLLAFYKERRVL 879
G+ VG+ L + W LL +E+ L
Sbjct: 1169 GMYFVGSADTLRHNQGRTCWGKLLTGMEEQECL 1201
Score = 50.4 bits (115), Expect = 7e-06
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 451 LNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVR---QNGGPVLVCAPSNTAV 507
L SQ A+ HAL L+++QGPPG GKT IV L+ Q GPVL+ N A+
Sbjct: 517 LESSQSEALLHALNNRLAIVQGPPGCGKTFLGVKIVQLLLSLQPQLTGPVLLLTYKNHAL 576
Query: 508 DQLTEKIHRTGLK--VVRLCAKSRE 530
D+ + + + K +VR+ +S+E
Sbjct: 577 DEFLKAMFQFCEKENIVRIGGRSKE 601
>SB_3481| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1)
Length = 1347
Score = 84.6 bits (200), Expect = 4e-16
Identities = 68/213 (31%), Positives = 95/213 (44%), Gaps = 28/213 (13%)
Query: 593 VICTTCVGAGDPRVARMRFQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVM 652
V+ TTC+G + F ++DE Q T+P C+ P+ AR +LVGDH QL P+V
Sbjct: 1023 VVATTCLGVNHALFTQRSFDYCIVDEASQITQPVCLGPL-RHARVFVLVGDHYQLPPLVQ 1081
Query: 653 CKKAAKAGLSQSLFERLVVLGIRP-FRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEER 711
+A + G+ SLF+RL + LE QYRMH ++ + Y L+ G
Sbjct: 1082 SLQAREGGMDVSLFKRLSERHPQAVVSLEHQYRMHKDIMTLSNTLIYGDRLKCGTPQVAN 1141
Query: 712 RLHKIDFP-------WPR----------------PDRPMFFYVTQGQEEI-AGSGTSYLN 747
L +D P W R P P+ F T + SG+ N
Sbjct: 1142 AL--LDIPHWDELCVWLRTHASQADDNWLIQALDPCYPVVFLNTDKVPALETHSGSLVSN 1199
Query: 748 RTEAANVEKLTTRFLKAGVRPEQIGIITPYEGQ 780
EA V++LT + GV P IGII+PY Q
Sbjct: 1200 EREAILVQQLTCALRRGGVEPGSIGIISPYRHQ 1232
>SB_56273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 77.4 bits (182), Expect = 6e-14
Identities = 66/201 (32%), Positives = 99/201 (49%), Gaps = 33/201 (16%)
Query: 679 LEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWP-----RPDRPMFFYVTQ 733
L+ QYRMH E+ FPS+ FY+ L + R +DF WP R D P F +
Sbjct: 346 LKEQYRMHAEICHFPSEQFYDKLLLTSATVALRTPSPVDF-WPAQVLYRKDVPRVFCHVE 404
Query: 734 GQEEIAGSGTSYLNRTEAANVEKLT-----TRFL--KAGVRPEQIGIITPYEGQRSYLVQ 786
G E+ + T Y N +N ++ + L K V + I+TPY Q+ L++
Sbjct: 405 GCEKSSVIKTQYSNHGSKSNEKEANKAVHVAKVLVNKYAVNHGDVVILTPYR-QQQVLIK 463
Query: 787 HMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRS---NEHQG----------IGF 833
LHA Y +I+V+++ QG E D +I+S VRS +E + +GF
Sbjct: 464 E-----GLHAP-YDDIQVSTIIKSQGSEWDYVILSLVRSLPKDEIEAEPSSKWLGDNLGF 517
Query: 834 LSDPRRLNVALTRAKYGLIVV 854
L D ++NVALTRA+ GL ++
Sbjct: 518 LRDEHQINVALTRARRGLCII 538
Score = 58.8 bits (136), Expect = 2e-08
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Query: 612 QSILIDEGMQSTEPECMVPVVLG-ARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLV 670
Q +++DE EPE +VP+ A+Q++L+GDH QL P++ A + GL S+FER
Sbjct: 240 QQVIVDECGMCFEPETLVPITCARAKQVVLIGDHKQLQPIIKDNDAKRLGLEISMFERYA 299
Query: 671 VLGIRPFRLEVQYRM---HPELSRF 692
I L+ QYRM H E+S F
Sbjct: 300 KKAI---MLKEQYRMRFYHLEISMF 321
>SB_47951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 75.8 bits (178), Expect = 2e-13
Identities = 65/201 (32%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 451 LNRSQVYAVKHALQRP-LSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPSNTAVDQ 509
L+ SQ AV AL++P +++I GPPGTGKT T I+ Q ++ G VL CAPSN AVD
Sbjct: 235 LDLSQREAVGFALRQPEVAVIHGPPGTGKTTTVVEIILQATKKCGMKVLACAPSNIAVDN 294
Query: 510 LTEKIHRTGLKVVRLCAKSR----------EAMESSVSFLALHEQARALGSADSELRKLT 559
L EK+ R+ KVVRL +R +A+ SS S A+ + R D ++K
Sbjct: 295 LVEKLARSKAKVVRLGHPARLLKDIQQHSLDAILSSSSSTAIVQDVRR--DIDLTMKKSC 352
Query: 560 RLK-EEAGELS---XXXXXXXXXXXXXXXXXXXXXXXVICTTCVGAGDP----RVARMRF 611
+ K E +L V+ T AGD + F
Sbjct: 353 KSKPAERRQLRQEIKVLRKELRDREEKAMREILTGVEVVLATNTSAGDTGPLGLLKEDHF 412
Query: 612 QSILIDEGMQSTEPECMVPVV 632
++IDE Q+ E C +P++
Sbjct: 413 DLVVIDEAAQALEASCWIPLL 433
>SB_6010| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 72.9 bits (171), Expect = 1e-12
Identities = 92/330 (27%), Positives = 136/330 (41%), Gaps = 64/330 (19%)
Query: 611 FQSILIDEGMQSTEPECMVPVVLGA--RQLILVGDHCQLGPVVMCKK------------- 655
F IL+DE Q+ EPE ++P+ L Q++ GDH Q+ P V K
Sbjct: 447 FSHILVDEAAQAWEPEALIPLGLAGPNTQVVFTGDHMQMSPEVYSKSLFNEALRNAQSSG 506
Query: 656 -AAKAGLSQSLFERLV----------VLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQN 704
+ + GL +SL ERL L L YR + + +F SD FY L
Sbjct: 507 GSQEWGLQKSLPERLFDQYNMLTNEHFLKSHVMFLTENYRSNEVILQFSSDCFYGKKLAA 566
Query: 705 GVSAEERRLHKIDFPWPRPDR-PMFFYVTQGQEEIAGSGTSYLNRTEA----ANVEKLTT 759
G + + P PD P+ FY +G+EEI S+LN +E VE+L
Sbjct: 567 GGAGDNL---------PHPDLGPLMFYSARGREEIQHDN-SFLNASEVDEVVKRVEELAE 616
Query: 760 RFLKAGVRPEQIGIITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIII 819
++ +Q+ I +Y Q + L K + + V ++ QGRE +
Sbjct: 617 KWPNLQWGEKQLSEIAVLS---AYHYQVRAIRDRLKRKGLRRVTVDTIHNVQGREFRAVF 673
Query: 820 MSCVRSN--------EHQG--------IGFLSDPRRLNVALTRAKYGLIVVGNPKVLSK- 862
+S VR++ +H FLSDP+ LN A+TRAK + VVG+P L
Sbjct: 674 ISTVRTSHTVKPLIDQHTAECSKDELYFEFLSDPKLLNTAITRAKSLVAVVGDPVSLCTV 733
Query: 863 ---QPLWNHLLAFYKERRVLTEGPLSNLKE 889
+ LW + E R + L E
Sbjct: 734 GDCRRLWKDFIKRCNELRAFYGYTMEQLNE 763
Score = 37.1 bits (82), Expect = 0.073
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 451 LNRSQVYAVKHALQR----PLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPSNTA 506
LN SQ ++ +R P ++ GP GTGK+ T V QL+ +L+C +N+A
Sbjct: 301 LNDSQKAVIRAIAKREPPSPPVVVFGPFGTGKSFTLNQGVRQLLTSGKNRILLCTKTNSA 360
Query: 507 VDQLTEKIHR 516
D E +H+
Sbjct: 361 ADIHVELLHQ 370
Score = 32.7 bits (71), Expect = 1.6
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 451 LNRSQVYAVKHALQRPLSLIQGPP 474
LN+ Q A+K AL +P +LIQGPP
Sbjct: 1990 LNKYQEDAIKEALTQPFTLIQGPP 2013
>SB_44103| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 72.1 bits (169), Expect = 2e-12
Identities = 30/69 (43%), Positives = 52/69 (75%), Gaps = 3/69 (4%)
Query: 802 IEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTRAKYGLIVVGNPKVLS 861
+++++VDAFQG EKD++++SCVR+ +GF+ RR NVALTRAK L+++G+ ++LS
Sbjct: 127 LQISTVDAFQGGEKDVVLLSCVRTKR---VGFIDCDRRTNVALTRAKRHLLIIGSLRMLS 183
Query: 862 KQPLWNHLL 870
+W +++
Sbjct: 184 SNAVWGNVI 192
Score = 48.0 bits (109), Expect = 4e-05
Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 644 HCQLGPVVMCKKAAK-AGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSL 702
H QL P + + GL Q+LF+RL+ L YR HP +S + FY+ L
Sbjct: 16 HKQLSPTIQGSEPEHDKGLEQTLFDRLIKL----------YRCHPVISAIANKLFYDSQL 65
Query: 703 QNGVSAEERRLHKIDFPWPRPDRPMFFYVTQGQEEIAGSGTSYLNRTE 750
++GV++EER +DF F+ V++GQE+ G SY N E
Sbjct: 66 KDGVTSEERS-PIVDF----AATLCFYNVSRGQEK-HGQDGSYYNEEE 107
>SB_56108| Best HMM Match : Kelch_2 (HMM E-Value=3.7)
Length = 170
Score = 64.5 bits (150), Expect = 4e-10
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 734 GQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQIGIITPY-EGQRSYLVQHMQYQG 792
G++E S Y E N + T + +R + ++ + E + MQ
Sbjct: 2 GEDEHFESEFYYPEEIEEENFD--TKKNKGFAIRKDIFVVVQSFKEWTLCFEAMEMQLLN 59
Query: 793 SLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIG-FLSDPRRLNVALTRAKYGL 851
+ + +EIE+ +VD +QGR+K I++S VRSN+ +G L D RR+NVA++RAK L
Sbjct: 60 DVPRESLEEIEINTVDKYQGRDKGCILVSLVRSNDAANVGELLKDWRRVNVAVSRAKRKL 119
Query: 852 IVVGNPKVLSKQPLWNHLL 870
I++G+ L L LL
Sbjct: 120 ILIGSLSTLKASLLLRELL 138
>SB_13949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 62.1 bits (144), Expect = 2e-09
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 614 ILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVV-MCKKAAKAGLSQSLFERLVVL 672
++++E + EP+ + + + LI++GDH QL P V K K L S+FERL+
Sbjct: 485 MIVEEAAEILEPQLVSVIPSCTQHLIMIGDHQQLRPQVHFIKLRLKHNLDVSMFERLIKG 544
Query: 673 GIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRPMFFYVT 732
I +L+ Q RM E + D E + + K P ++ MF
Sbjct: 545 EIPYTQLKYQGRMRDEFA----DLLRELGIYEDLRTRTELGDKTS-PVDCMEKTMFLINH 599
Query: 733 QGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQIGIITPYEGQR 781
+E + SY N EA + + ++ GV+PE+I I+ Y GQ+
Sbjct: 600 TRKESTRKTSHSYKNDFEAEQIVETAKFLIQNGVKPEEITILCSYRGQK 648
>SB_35262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 54.8 bits (126), Expect = 3e-07
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 7/91 (7%)
Query: 621 QSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLV----VLGI-- 674
Q E + ++P+ +LILVGD QL V+ KA + +S+F+RL VL
Sbjct: 3 QCCEMDILIPLQYRPSKLILVGDPEQLPATVISTKARELLYGRSMFDRLYKFFKVLPRHE 62
Query: 675 RPFRL-EVQYRMHPELSRFPSDFFYEGSLQN 704
RP L E+QYRMHPE++ FP++ Y +++N
Sbjct: 63 RPVHLLELQYRMHPEIALFPAEHVYNKAIRN 93
>SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09)
Length = 1084
Score = 53.6 bits (123), Expect = 8e-07
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 811 QGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTRAKYGLIVVGNPKVLSK-QPLWNHL 869
+G E DII++S VRSN+ IGFLS R+ VAL+RA+ G +GN + + LW ++
Sbjct: 176 RGEENDIILLSLVRSNDEGKIGFLSISNRVCVALSRARKGFYCIGNMSQMGEVDDLWRNI 235
Query: 870 LAFYKER 876
+ + ++
Sbjct: 236 VGEFHDK 242
Score = 33.9 bits (74), Expect = 0.68
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 614 ILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAK-AGLSQSLFERL 669
++++E + E + + + LIL+GDH QL P K A+ L SLFER+
Sbjct: 17 VIVEEAAEVLEAHIVTALSPACQHLILIGDHKQLRPNTNVYKLARDFKLDVSLFERM 73
>SB_25920| Best HMM Match : DUF1193 (HMM E-Value=2.2)
Length = 263
Score = 52.4 bits (120), Expect = 2e-06
Identities = 53/173 (30%), Positives = 74/173 (42%), Gaps = 37/173 (21%)
Query: 611 FQSILIDEGMQSTEPECMVPVVLGA--RQLILVGDHCQLGPVVMCKK------------- 655
F IL+DE Q+ EPE ++P+ L Q++ GDH Q+ P V K
Sbjct: 44 FSHILVDEAAQAWEPEALIPLGLAGPNTQVVFTGDHMQMSPEVYSKSLFNEALRNAQSSG 103
Query: 656 -AAKAGLSQSLFERLV----------VLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQN 704
+ + GL +SL ERL L L YR + + +F SD FY L
Sbjct: 104 GSQEWGLQKSLPERLFDQYNMLTNEHFLKSHVMFLTENYRSNEVILQFSSDCFYGKKLVA 163
Query: 705 GVSAEERRLHKIDFPWPRPD-RPMFFYVTQGQEEIAGSGTSYLNRTEAANVEK 756
G + + P PD P+ FY +G+EEI S+LN +E V K
Sbjct: 164 GGAGDN---------LPHPDLGPLMFYSARGKEEIQ-HDNSFLNASEVDEVVK 206
>SB_41548| Best HMM Match : ResIII (HMM E-Value=0.27)
Length = 514
Score = 48.8 bits (111), Expect = 2e-05
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 435 FRVHLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVR--- 491
F + LP++F+ L SQ A+ HAL L+++QGPPG GKT IV L+
Sbjct: 364 FLLLLPRNFNTL----LESSQSEALVHALSNRLAIVQGPPGCGKTFLGVKIVQLLLSLQP 419
Query: 492 QNGGPVLVCAPSNTAVDQLTEKIHRTGLK--VVRLCAKSRE 530
Q GPVL+ N A+D+ + + + K +VR+ + +E
Sbjct: 420 QLTGPVLLLTYKNHALDEFLKAMLQFCEKENIVRIGGRCKE 460
>SB_19368| Best HMM Match : DEAD (HMM E-Value=4)
Length = 217
Score = 48.0 bits (109), Expect = 4e-05
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 448 LPDLNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPSNTA 506
+ +LN Q AV AL +LI G PGTGKT T A +V L+ +G VL+ + ++TA
Sbjct: 106 IQELNAGQKRAVCKALTAEDYALILGMPGTGKTTTIACLVKVLI-ASGKSVLLTSYTHTA 164
Query: 507 VDQLTEKIHRTGLKVVRL 524
VD + K+ G+ +RL
Sbjct: 165 VDNILLKLKEAGVDFLRL 182
>SB_47275| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 37.1 bits (82), Expect = 0.073
Identities = 16/25 (64%), Positives = 20/25 (80%)
Query: 827 EHQGIGFLSDPRRLNVALTRAKYGL 851
++ +GFLSDPR LN A+TRAKY L
Sbjct: 70 DNHHLGFLSDPRLLNTAVTRAKYHL 94
>SB_10193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 34.7 bits (76), Expect = 0.39
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 831 IGFLSDPRRLNVALTRAKYGLIVVGNPKVL 860
+GFL D ++NVALTRA+ GL ++ K +
Sbjct: 33 LGFLRDEHQINVALTRARRGLCIIDTSKAV 62
>SB_31309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 34.7 bits (76), Expect = 0.39
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 456 VYAVKHALQR--PLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPSNTAVDQLTEK 513
++ + H ++ P ++ Q GTG+ T A+++ +L + G V V APS DQ E+
Sbjct: 233 IHVINHVIKPSLPATVTQYLHGTGQFTTFASLMRKLGTELTGHVTVFAPS----DQAFER 288
Query: 514 IHRTGLKVV 522
IHR L++V
Sbjct: 289 IHRRFLQMV 297
>SB_57422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 59
Score = 33.5 bits (73), Expect = 0.90
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 794 LHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNE 827
LH I+V SV+ FQG E+ +II+S VRS++
Sbjct: 8 LHKNNITGIKVGSVEEFQGDERRVIIISTVRSSQ 41
>SB_3314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 663
Score = 33.5 bits (73), Expect = 0.90
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 470 IQGPPGTGKTVTSATIVYQLVRQ-NGGPVLVCAPSNTAVDQLTEKI 514
+ GPPGTGKT + I+ + L+ SN A++QL+EKI
Sbjct: 590 VVGPPGTGKTDVAVQIISNIYHNFPEQRTLLVTHSNQALNQLSEKI 635
>SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2)
Length = 628
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 448 LPDLNRSQVYAVKHALQRPLS-LIQGPPGTGKTVTSATIVYQLVR 491
L + R+ V + RP L+ GPPGTGKTVT + Q+ R
Sbjct: 573 LNERQRAAVARILSGQSRPTPYLLFGPPGTGKTVTLVEAMLQVHR 617
>SB_5452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 31.5 bits (68), Expect = 3.6
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 469 LIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPSNTAVDQLTEKIHRTGLKVVRLCAKS 528
+I PP TG V+ +T+ QL+ + G P + P V + + L V R C
Sbjct: 18 IICKPPNTGGLVSPSTVAEQLIYEIGDPCMYILPD--VVCDFSNVTVQGVLVVCRTCV-- 73
Query: 529 REAMESSVSFL 539
E +ES V +L
Sbjct: 74 YEKLESKVEYL 84
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 30.3 bits (65), Expect = 8.4
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 475 GTGKTVTSATIVYQLVRQ--NGGPVLVCAPSNTAVD 508
G GKT+ + + +Y L+++ + GP LV AP +T V+
Sbjct: 666 GLGKTIQTISFLYSLMKEGHSQGPFLVSAPLSTLVN 701
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.135 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,009,608
Number of Sequences: 59808
Number of extensions: 1363863
Number of successful extensions: 3379
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3293
Number of HSP's gapped (non-prelim): 56
length of query: 1032
length of database: 16,821,457
effective HSP length: 89
effective length of query: 943
effective length of database: 11,498,545
effective search space: 10843127935
effective search space used: 10843127935
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)
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