BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001540-TA|BGIBMGA001540-PA|IPR006935|Type III
restriction enzyme, res subunit
(1032 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 1183 0.0
02_05_0444 - 29073740-29073844,29074417-29074725,29077910-290779... 196 8e-50
03_05_0169 + 21474655-21474771,21474879-21474971,21475553-214756... 194 2e-49
09_01_0155 - 2301903-2302151,2302334-2302491,2302651-2302819,230... 183 8e-46
10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,117... 179 9e-45
10_08_0765 - 20421813-20423174,20423591-20423771,20423862-204241... 170 4e-42
06_02_0092 - 11624905-11625123,11625206-11625292,11625767-116258... 162 2e-39
03_01_0417 - 3197956-3198438,3198550-3200001,3200116-3200277,320... 160 5e-39
04_03_0946 + 20975955-20976095,20976189-20976330,20976449-209765... 159 8e-39
04_04_0919 - 29422003-29422267,29422411-29422660,29423163-294234... 159 1e-38
03_04_0201 - 18409088-18409306,18409389-18409475,18409950-184100... 159 1e-38
04_04_0915 - 29385926-29385952,29386069-29386285,29386367-293866... 152 1e-36
02_05_0329 - 27986261-27987372,27988632-27988638,27988999-279891... 133 6e-31
04_04_0959 + 29692740-29693035,29693102-29693267,29693433-296936... 132 1e-30
04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865... 128 2e-29
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 109 9e-24
04_04_0917 - 29404341-29404519,29404610-29404744,29404898-294052... 102 2e-21
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576... 95 3e-19
03_03_0186 + 15243150-15243563,15243685-15243777,15244604-152446... 91 6e-18
04_04_0918 - 29411239-29411373,29412276-29412526,29412772-294130... 81 6e-15
11_06_0562 + 25003246-25003746,25004975-25005214,25005576-250060... 75 4e-13
01_05_0201 - 19225597-19225890,19227832-19228030,19228133-192283... 58 5e-08
02_05_0330 - 27996080-27996757,27996836-27997366,27998124-27998303 49 2e-05
12_01_0489 + 3872495-3872538,3872663-3872741,3872835-3872914,387... 36 0.22
05_03_0045 + 7752571-7752599,7754013-7754078,7754228-7754228,775... 35 0.29
11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367,400... 31 3.6
12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045 31 4.8
09_04_0093 - 14550806-14552452 31 6.3
>07_03_0471 +
18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 1183 bits (2929), Expect = 0.0
Identities = 542/821 (66%), Positives = 652/821 (79%), Gaps = 6/821 (0%)
Query: 88 EDEALYSNKELPDHACKYCGIHDPATVVMCNI--CNKWFCNGRGNTSGSHIINHLVRAKH 145
ED Y + +HAC+YCGIH+PA V CN+ C KWFCN RGNTSGSHI+NHLVRAKH
Sbjct: 149 EDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKH 208
Query: 146 KEAALHRDGPLGETLLECYSCGARNVFVLGFIPAKADSVVVLLCRQPCAAQSSLKDMNWD 205
KE LH+D PLGET+LECY+CG RNVF+LGFI AKA++VVVLLCR+PC + ++LKDMNWD
Sbjct: 209 KEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKAENVVVLLCREPCLSVNALKDMNWD 268
Query: 206 QEQWKPLISDRAFLSWLVKVPSETEQMRARQVTPQQIGRLEELWRDNVDATFQDLEKPGV 265
QW PLI DR FLSWLVKVPSE EQ+RARQ++ QQI ++EELW+ N DA+ +DLEKPGV
Sbjct: 269 LSQWCPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGV 328
Query: 266 DEEPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQEGIEVRWDVGLNKKTIAYF 325
D+EP QV L+YED YQYQN+F PL+KLEADYDK +KESQ+++ + VRWD+GLNKK IAYF
Sbjct: 329 DDEPQQVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDSLTVRWDIGLNKKRIAYF 388
Query: 326 TLAKTDSDMKLMHGDELRLRYVGEM-HKAWSGVGHVIKVPDNYGDDVGLELKSGAGAPLD 384
K D++++L+ GDELRLRY G+ H AW VGHVIK+ ++V LEL++ G P+D
Sbjct: 389 VFPKEDNELRLVPGDELRLRYSGDSSHPAWQSVGHVIKLTAQ--EEVALELRASQGVPVD 446
Query: 385 CTSNFVVDFIWKSTSFDRMQLALRKFALDDSSVSGYIYRRLLGHEVEEVLFRVHLPKHFS 444
F VDF+WKSTSFDRMQ A++ FA+D++SVSGYIY LLGHEVE + R LP+ F
Sbjct: 447 LNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFG 506
Query: 445 APNLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPSN 504
AP LP+LN SQV AVK LQ+P+SLIQGPPGTGKTVTSA IVY + +Q G VLVCAPSN
Sbjct: 507 APGLPELNASQVLAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSN 566
Query: 505 TAVDQLTEKIHRTGLKVVRLCAKSREAMESSVSFLALHEQARALGSAD-SELRKLTRLKE 563
AVDQL EKI TGLKVVRLCAKSREA+ S V L LH Q R L +++ SEL KL +LK+
Sbjct: 567 VAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKD 626
Query: 564 EAGELSXXXXXXXXXXXXXXXXXXXXXXXVICTTCVGAGDPRVARMRFQSILIDEGMQST 623
E GELS VIC TCVGAGDPR+A RF+ +LIDE Q+T
Sbjct: 627 EQGELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLANFRFRQVLIDESTQAT 686
Query: 624 EPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPFRLEVQY 683
EPEC++P+VLG +Q++LVGDHCQLGPV+MCKKAA+AGL+QSLFERLV+LG++PFRL+VQY
Sbjct: 687 EPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQY 746
Query: 684 RMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRPMFFYVTQGQEEIAGSGT 743
RMHP LS FPS+ FYEG+LQNGV+ ER+ IDFPWP P+RPMFFYV GQEEI+ SGT
Sbjct: 747 RMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDFPWPVPNRPMFFYVQMGQEEISASGT 806
Query: 744 SYLNRTEAANVEKLTTRFLKAGVRPEQIGIITPYEGQRSYLVQHMQYQGSLHAKLYQEIE 803
SYLNRTEAANVEK+ T FL++GV P QIG+ITPYEGQR+Y+V +M GSL +LY+EIE
Sbjct: 807 SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIE 866
Query: 804 VASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTRAKYGLIVVGNPKVLSKQ 863
VASVD+FQGREKD II+SCVRSNEHQGIGFL+DPRRLNVALTRA+YG++++GNPKVLSKQ
Sbjct: 867 VASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQ 926
Query: 864 PLWNHLLAFYKERRVLTEGPLSNLKESAIQFAKPKKLVNSQ 904
PLWN LL YKE L EGPL+NLK+S +QF KPKK+ N +
Sbjct: 927 PLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDR 967
>02_05_0444 -
29073740-29073844,29074417-29074725,29077910-29077981,
29078541-29078633,29078825-29078982,29079247-29079415,
29080204-29081241,29081632-29081759,29081926-29081985,
29082033-29083077
Length = 1058
Score = 196 bits (478), Expect = 8e-50
Identities = 153/440 (34%), Positives = 223/440 (50%), Gaps = 38/440 (8%)
Query: 451 LNRSQVYAVKHAL--QRPLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPSNTAVD 508
L+ SQ+ A+ L +RP+ +IQGPPGTGKTV ++ + V+Q G VLV APSN AVD
Sbjct: 472 LDASQLKALSLGLNKKRPVLIIQGPPGTGKTVLLTELIVRAVQQ-GENVLVTAPSNAAVD 530
Query: 509 QLTEKIHRTGLKVVRLCAKSREAMESSVSFLA------LHEQARALGSADSELRK-LTRL 561
+ E++ TGL +VR+ +R + + LA L + + L S+LRK L+
Sbjct: 531 NMVERLSNTGLNIVRVGNPARISPSVASKSLAEIVNGRLEQFRKELERKRSDLRKDLSYC 590
Query: 562 KEE----AG--ELSXXXXXXXXXXXXXXXXXXXXXXXVICTTCVGAGDPRVARMR-FQSI 614
E+ AG +L V+ +T GA DP + R F +
Sbjct: 591 IEDDSLAAGIRQLLKQLGRDLEKKEKEMIREALSEAQVVLSTNTGAADPLIRRTCCFDLV 650
Query: 615 LIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL-- 672
+IDE Q+ EP C +P++ G R IL GDHCQL PV++ +KA GL +SL ER L
Sbjct: 651 IIDEAGQAIEPSCWIPILQGKR-CILAGDHCQLAPVILSRKALDGGLGKSLLERASSLHN 709
Query: 673 GIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHK---IDFPW----P---- 721
G+ RL VQ+RM+ ++ + S Y G L++ S + L + W P
Sbjct: 710 GLLTTRLTVQHRMNDSIASWASKEMYHGLLKSSHSVASQTLADSPVVKATWITRCPLLLL 769
Query: 722 RPDRPMFFYVTQGQEEIAGSGT-SYLNRTEAANVEKLTTRFLKAGVRPEQIGIITPYEGQ 780
P T E+I SGT S+ N EA V + + GV P I + +PY Q
Sbjct: 770 DTRMPYGALDTGCGEQIDLSGTGSFYNDGEADIVTQHVLNLVHCGVSPTAIAVQSPYIAQ 829
Query: 781 RSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRL 840
L + ++ L +EV+++D+FQGRE D +++S VRSN +GFL D RR+
Sbjct: 830 VQLLRERLEEYPGLSG-----VEVSTIDSFQGREADAVVISMVRSNPLGAVGFLGDSRRM 884
Query: 841 NVALTRAKYGLIVVGNPKVL 860
NVA+TRA + VG P ++
Sbjct: 885 NVAITRA-CRHVTVGPPYIV 903
>03_05_0169 +
21474655-21474771,21474879-21474971,21475553-21475642,
21475728-21475811,21476088-21476252,21476995-21477182,
21477363-21477435,21477766-21477819,21478019-21478276,
21478891-21479097,21479293-21479396,21479809-21479953,
21480108-21480242,21480610-21480783
Length = 628
Score = 194 bits (474), Expect = 2e-49
Identities = 142/451 (31%), Positives = 226/451 (50%), Gaps = 27/451 (5%)
Query: 445 APNLPDLNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPS 503
+P +L+ SQ A+ AL+ R + L+ GPPGTGKT T I+ Q V++ G +L CA S
Sbjct: 173 SPFNKNLDESQKDAISKALRSRDVFLLHGPPGTGKTTTIIEIILQEVKR-GSKILACAAS 231
Query: 504 NTAVDQLTEKIHRTGLKVVRLCAKSR---EAMESSVSFLALHEQARAL-GSADSELR--- 556
N AVD + E++ R K+VRL +R + ++S++ L +L G E++
Sbjct: 232 NIAVDNIVERLSRYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEMKVLN 291
Query: 557 -KLTRLKEEAGELSXXXXXXXXXXXXXXXXXXXXX-----XXVICTTCVGAGDPRVARMR 610
KL + K++ + V+ +T GA ++ +
Sbjct: 292 SKLLKAKDKNTKRDIRKELRTLAKEERKRQQLAVADVIKNADVVLSTLTGASSKKLDGIT 351
Query: 611 FQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLV 670
F ++IDE Q+ E C + ++ G R +L GDH QL P + +A K G+ ++LFERL
Sbjct: 352 FDLVIIDEAAQALEMACWIALLKGPR-CVLAGDHLQLPPTIQSAEAEKKGMGKTLFERLT 410
Query: 671 -VLGIR-PFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKID-FPWPRPDRPM 727
G + L +QYRMH + + S Y ++ S + L+ I+ P
Sbjct: 411 EAYGDQITSMLTIQYRMHELIMNWSSKELYNNKIKAHSSVADHMLYDIEEVKRSSSTEPT 470
Query: 728 FFYV-TQG--QEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQIGIITPYEGQRSYL 784
+ T G EE+ S +N EAA +++GVR IGIITPY Q
Sbjct: 471 IILIDTTGCDMEEVKDEEESTMNEGEAAVSIAHAKLLVESGVRASDIGIITPYAAQ---- 526
Query: 785 VQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVAL 844
V ++ + KL +++E+++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+
Sbjct: 527 VTCLKMMRNKDTKL-KDLEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVAV 585
Query: 845 TRAKYGLIVVGNPKVLSKQPLWNHLLAFYKE 875
TRA+ +V + + +S L+ +++E
Sbjct: 586 TRARRQCCLVCDVETVSNDKFLKRLVEYFEE 616
>09_01_0155 -
2301903-2302151,2302334-2302491,2302651-2302819,
2303796-2304839,2305792-2306075,2306318-2307333,
2307937-2308085
Length = 1022
Score = 183 bits (445), Expect = 8e-46
Identities = 149/463 (32%), Positives = 228/463 (49%), Gaps = 45/463 (9%)
Query: 447 NLPDLNRSQVYAVKHAL--QRPLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPSN 504
N D + SQ+ A+ L +RP+ +IQGPPGTGKT + ++ VR+ G VLV APSN
Sbjct: 542 NKYDFDASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSYLIACAVRK-GERVLVTAPSN 600
Query: 505 TAVDQLTEKIHRTGLKVVRLCAKSREAMESSVSFLALHEQA-RALGSADSEL-RKLTRLK 562
AVD + EK+ TGL VR+ +R + SV+ +L E R L E RK + L+
Sbjct: 601 AAVDNMVEKLSDTGLDTVRVGNPAR--ISPSVASRSLGELVNRRLQKFTEEFERKKSDLR 658
Query: 563 EE-----------AG--ELSXXXXXXXXXXXXXXXXXXXXXXXVICTTCVGAGDPRVARM 609
++ AG +L V+ +T +GA DP V R+
Sbjct: 659 KDLKHCIQDDTLAAGIRQLLKQLGKNFKKKEKEIIREVLSNADVVLSTNIGAADPLVRRI 718
Query: 610 R-FQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFER 668
F ++IDE Q+ EP C +P++ G R IL GD QL PVV+ ++A + GL+ SL ER
Sbjct: 719 GCFDLVIIDEAGQAIEPSCWIPILQGKR-CILAGDQRQLAPVVLSREAMQGGLAMSLLER 777
Query: 669 LVVL--GIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRP--- 723
L + +L QYRMH ++ + S+ Y+G L++ S L D+P+ +
Sbjct: 778 ASSLHNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLL--ADYPFIKETWI 835
Query: 724 DRPMFFYV----------TQGQEEIAGSGT-SYLNRTEAANVEKLTTRFLKAGVRPEQIG 772
R F + +E + +GT S+ N EA V + ++ GV P I
Sbjct: 836 TRCAFLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHVLNLVQCGVSPTAIA 895
Query: 773 IITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIG 832
+ +PY Q L ++ +EV+++D+FQGRE D +++S VRSN +G
Sbjct: 896 VQSPYIAQVQLLRDRLEDYPEASG-----VEVSTIDSFQGREADAVVISMVRSNTLGAVG 950
Query: 833 FLSDPRRLNVALTRAKYGLIVVGNPKVLSKQPLWNHLLAFYKE 875
FL D RR+NVA+TRA+ + +V + + LL ++
Sbjct: 951 FLGDNRRMNVAITRARRHVALVCDSSTICNNAFLARLLRHIRQ 993
>10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,
1172998-1173381,1173478-1175253,1175329-1175452,
1176859-1177027,1177131-1177226,1177339-1177527,
1177965-1179303
Length = 1468
Score = 179 bits (436), Expect = 9e-45
Identities = 123/352 (34%), Positives = 184/352 (52%), Gaps = 13/352 (3%)
Query: 533 ESSVSFLALHEQARALGSADSELRKLTRLKEEAGELSXXXXXXXXXXXXXXXXXXXXXXX 592
+ S FL L + A ++ S D L +++RL
Sbjct: 911 DRSRDFL-LQKLAASVESRDKVLVEMSRLLILESRFRVGSNFNMEDARASLEASFANEAE 969
Query: 593 VICTTCVGAGDPRVARMR--FQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPV 650
++ TT +G +R+ F ++IDE Q++E + P+ LGA + +LVGD QL
Sbjct: 970 IVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAVLPPLSLGAARCVLVGDPQQLPAT 1029
Query: 651 VMCKKAAKAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEE 710
V+ K A S+SLFER + G L VQYRMHP++ FPS FY+G L + S
Sbjct: 1030 VISKAAGTLMYSRSLFERFQLSGCPTILLSVQYRMHPQIREFPSRHFYQGRLTDSESVV- 1088
Query: 711 RRLHKIDFPWPRPDRPMFFY-VTQGQEEIAGSGTSYLNRTEAANVEKL---TTRFLKA-G 765
+L + P FY ++ G+E G +SY N EA V +L +FL+A G
Sbjct: 1089 -KLPDEAYYRDALMAPYIFYDISHGRESHRGGSSSYQNVHEAQFVLRLYENLQKFLRANG 1147
Query: 766 VRPEQIGIITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRS 825
+ +GIITPY+ Q L +++ + + ++I + +VDAFQG+E+D+IIMSCVR+
Sbjct: 1148 GKKASVGIITPYKLQLKCL--QREFEEVMSTEDGKDIYINTVDAFQGQERDVIIMSCVRA 1205
Query: 826 NEHQGIGFLSDPRRLNVALTRAKYGLIVVGNPKVLSKQPLWNHLLAFYKERR 877
+ H G+GF++D RR+NVALTRA+ L VVGN L + W L+A K R+
Sbjct: 1206 SNH-GVGFVADIRRMNVALTRARRALWVVGNAGALMQSEDWALLIADAKARK 1256
Score = 35.5 bits (78), Expect = 0.22
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 8/55 (14%)
Query: 435 FRVHLPKHFSAPNLPDLNRSQVY--------AVKHALQRPLSLIQGPPGTGKTVT 481
F HL + F+ P L ++ + ++ AVK P +L+QGPPGTGKT T
Sbjct: 670 FADHLHRTFNGPQLSAIHWAAMHTAAGTSNGAVKKQEPWPFTLVQGPPGTGKTHT 724
>10_08_0765 -
20421813-20423174,20423591-20423771,20423862-20424117,
20424768-20425095,20425218-20426156,20427015-20427761,
20428517-20428789
Length = 1361
Score = 170 bits (414), Expect = 4e-42
Identities = 101/273 (36%), Positives = 147/273 (53%), Gaps = 7/273 (2%)
Query: 609 MRFQSILIDEGMQSTEPECMVPVVL-GARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFE 667
M ++IDE Q E E +VP++L G ++L+GD QL +V K A A +SL+E
Sbjct: 607 MPISILVIDEAAQLKECEALVPLLLPGIEHILLIGDENQLSSLVKSKIAKDADFGRSLYE 666
Query: 668 RLVVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRPM 727
RL +G R LEVQYRMHP +++FP+ FY+ + +G S ++ K P P
Sbjct: 667 RLCTMGYRKHLLEVQYRMHPGINKFPNANFYDNRISDGPSVQQEDYMKSYLPGPIYGAYS 726
Query: 728 FFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQ---IGIITPYEGQRSYL 784
F ++ E + G S N E A + R K Q +G+I+PY Q L
Sbjct: 727 FIHIENDMEMLDELGQSSKNMVEVAVATNIVERLAKECSEKRQRTSLGVISPYTAQVIAL 786
Query: 785 VQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVAL 844
+ + Q H + + V S+D FQG E+DII++S VRSN++ +GFLSD R+NVAL
Sbjct: 787 QERLGKQFKNHE--FLSVTVKSIDGFQGGEEDIILISTVRSNKNGKVGFLSDAGRINVAL 844
Query: 845 TRAKYGLIVVGN-PKVLSKQPLWNHLLAFYKER 876
TRAKY L ++GN +L+ +W L+ K R
Sbjct: 845 TRAKYCLWILGNGATLLASNSIWAELVHDSKRR 877
>06_02_0092 -
11624905-11625123,11625206-11625292,11625767-11625889,
11625992-11626351,11626427-11626511,11626603-11626661,
11627173-11627265,11627360-11627464,11627539-11627636,
11627811-11627916,11628009-11628131,11628986-11629021,
11629113-11629310,11629415-11629612,11629917-11630056,
11630181-11630322,11630416-11630556
Length = 770
Score = 162 bits (393), Expect = 2e-39
Identities = 122/390 (31%), Positives = 187/390 (47%), Gaps = 47/390 (12%)
Query: 497 VLVCAPSNTAVDQLTEKIHRTGLKVVRLCAKSREAMESSVSFLALHEQARALGSADSELR 556
VLVCAPSN+A+D++ ++ +TG++ + + + L H +A+ +
Sbjct: 341 VLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIG---LKAHHSVKAVS-----MD 392
Query: 557 KLTRLKEEAGELSXXXXXXXXXXXXXXXXXXXXXXXVICTTCVGAGDPRVARMR--FQSI 614
L + K + S ++ +T +G +RM F +
Sbjct: 393 YLIQQKLSGVDRSSDGGRRGAGEYDRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVV 452
Query: 615 LIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGI 674
+IDE Q+ VGD QL V+ A K G SLF+R G
Sbjct: 453 IIDEAAQA------------------VGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGF 494
Query: 675 RPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPD--RPMFFYVT 732
L++QYRMHPE+S FPS FYEG L++G ++R PW P F+
Sbjct: 495 PVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSKKR------PWHSYSCFGPFCFFDV 548
Query: 733 QGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVR-PE-----QIGIITPYEGQRSYLVQ 786
G E S++N E VE +T + + +R PE Q+ +I+PY Q L
Sbjct: 549 DGTESQPSGSGSWVNEDE---VEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKD 605
Query: 787 HMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTR 846
H ++ + + + I+V +VD FQGREK+++I SCVR N+ Q IGF+SD RR+NVA+TR
Sbjct: 606 H--FRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITR 663
Query: 847 AKYGLIVVGNPKVLSKQPLWNHLLAFYKER 876
A+ ++VVG+ L + WN+L+ KER
Sbjct: 664 ARSAVLVVGSASTLKEDKHWNNLVESAKER 693
>03_01_0417 -
3197956-3198438,3198550-3200001,3200116-3200277,
3200351-3201133
Length = 959
Score = 160 bits (389), Expect = 5e-39
Identities = 111/308 (36%), Positives = 164/308 (53%), Gaps = 30/308 (9%)
Query: 606 VARMRFQSILIDEGMQSTEPECMVPVV-LGARQ--LILVGDHCQLGPVVMCKKAAKAGLS 662
+ R F I +DE Q++EPE MVP+ L R ++L GD QLGPVV CK+A K GL
Sbjct: 531 IRRGHFTHIFLDEAGQASEPEAMVPLSGLCGRDTVVVLAGDPMQLGPVVYCKQAEKDGLG 590
Query: 663 QSLFERLVV------LGIRPF--RLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLH 714
+S +RL+ G + +L YR HP + PS+ FY G L ++ +E +
Sbjct: 591 KSYLQRLLFEYEQYSTGDPNYVTKLVRNYRCHPAILELPSELFYGGEL---IACKEDEVS 647
Query: 715 KI--DFPWPRPDRPMFFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAG-VRPEQI 771
I P P+ F QG +E G+ S+ NR EA+ V + + G VR I
Sbjct: 648 SIYDSIDLPNKSFPVLFVGIQGCDEREGNNPSWFNRIEASKVVNIIRNLTRGGDVREADI 707
Query: 772 GIITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRS----NE 827
G+ITPY Q ++ + +L +++V SV+ FQG+E++III+S VRS NE
Sbjct: 708 GVITPYRQQV------VKIKKALETFEMPDLKVGSVEQFQGQEREIIIISTVRSTVKHNE 761
Query: 828 HQ---GIGFLSDPRRLNVALTRAKYGLIVVGNPKVLSKQPLWNHLLAFYKERRVLTEGPL 884
+GFLS+ RR NVA+TRAK LI++GNP +++K W+ LL + + PL
Sbjct: 762 FDKFFNLGFLSNHRRFNVAITRAKSLLIIIGNPHIITKDRHWDRLLRYCADNGSYQGCPL 821
Query: 885 SNLKESAI 892
+E+ +
Sbjct: 822 PPPEETQV 829
Score = 45.2 bits (102), Expect = 3e-04
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 446 PNLPDLNRSQVYAVKHALQ-RPLS--LIQGPPGTGKTVTSATIVYQL-VRQNGGPVLVCA 501
P P +N Q AV L R ++ +I GPPGTGKT+T + QL + VL+CA
Sbjct: 390 PLNPHINTEQADAVATILGCRGVAPYVIYGPPGTGKTMTLVESILQLYTAKRRANVLICA 449
Query: 502 PSNTAVDQLTEKIHRTGL-----KVVRLCAKSREAMESSVSFL 539
SN+A D + K+ + + RL A SR+ + F+
Sbjct: 450 ASNSAADHVLAKLLQASYLIRPSDIFRLNAASRQYEDVDPDFI 492
>04_03_0946 +
20975955-20976095,20976189-20976330,20976449-20976588,
20976893-20977090,20977195-20977392,20977484-20977519,
20978374-20978496,20978589-20978694,20978869-20978966,
20979041-20979145,20979240-20979332,20979842-20979900,
20979984-20980068,20980144-20980503,20980606-20980728,
20981203-20981289,20981372-20981590
Length = 770
Score = 159 bits (387), Expect = 8e-39
Identities = 121/390 (31%), Positives = 186/390 (47%), Gaps = 47/390 (12%)
Query: 497 VLVCAPSNTAVDQLTEKIHRTGLKVVRLCAKSREAMESSVSFLALHEQARALGSADSELR 556
VLVCAPSN+A+D++ ++ + G++ + + + L H +A+ +
Sbjct: 341 VLVCAPSNSALDEIVLRVLQIGIRDENNNTYNPKIVRIG---LKAHHSVKAVS-----MD 392
Query: 557 KLTRLKEEAGELSXXXXXXXXXXXXXXXXXXXXXXXVICTTCVGAGDPRVARMR--FQSI 614
L + K + S ++ +T +G +RM F +
Sbjct: 393 YLIQQKLSGVDRSSDGGRRGAGEYDRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVV 452
Query: 615 LIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGI 674
+IDE Q+ VGD QL V+ A K G SLF+R G
Sbjct: 453 IIDEAAQA------------------VGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGF 494
Query: 675 RPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPD--RPMFFYVT 732
L++QYRMHPE+S FPS FYEG L++G ++R PW P F+
Sbjct: 495 PVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSKKR------PWHSYSCFGPFCFFDV 548
Query: 733 QGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVR-PE-----QIGIITPYEGQRSYLVQ 786
G E S++N E VE +T + + +R PE Q+ +I+PY Q L
Sbjct: 549 DGTESQPSGSGSWVNEDE---VEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKD 605
Query: 787 HMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTR 846
H ++ + + + I+V +VD FQGREK+++I SCVR N+ Q IGF+SD RR+NVA+TR
Sbjct: 606 H--FRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITR 663
Query: 847 AKYGLIVVGNPKVLSKQPLWNHLLAFYKER 876
A+ ++VVG+ L + WN+L+ KER
Sbjct: 664 ARSAVLVVGSASTLKEDKHWNNLVESAKER 693
>04_04_0919 -
29422003-29422267,29422411-29422660,29423163-29423481,
29423625-29424794,29424879-29425388,29425449-29425607
Length = 890
Score = 159 bits (386), Expect = 1e-38
Identities = 106/286 (37%), Positives = 154/286 (53%), Gaps = 14/286 (4%)
Query: 598 CVGAGDPRVARMRFQSILIDEGMQSTEPECMVPV-VLGARQLILVGDHCQLGPVVMCKKA 656
C +G ++ + +LIDE Q E E ++P+ V G + +L+GD CQL V K A
Sbjct: 556 CTVSGSAKLYEQKMDLLLIDEAAQLKECESLIPLQVSGLKHAVLIGDECQLPATVKSKAA 615
Query: 657 AKAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKI 716
A L +SLFERL +LG + L +QYRMHP +S FP+ FY+ + +G + R H+
Sbjct: 616 DGALLGRSLFERLTLLGHQKHLLNMQYRMHPSISIFPNFSFYDKKILDGPNVTHVR-HER 674
Query: 717 DFPWPRPDRP-MFFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQ---IG 772
F P F + G+E+ G + N E A ++K+ KA V + +G
Sbjct: 675 SFLQGAMFGPYSFINIENGRED---PGRNKRNMAEVAAIKKILHNLCKACVGTGEGVSVG 731
Query: 773 IITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIG 832
II PY Q V+ +Q +A ++ V SVD FQG E+DIII+S VRSN IG
Sbjct: 732 IICPYAAQ----VEAIQSGIDANAVRPLDVRVNSVDGFQGSEEDIIILSTVRSNSTGSIG 787
Query: 833 FLSDPRRLNVALTRAKYGLIVVGN-PKVLSKQPLWNHLLAFYKERR 877
FLS+ RR NVALTRA++ L ++G+ +L +W L+ +RR
Sbjct: 788 FLSNRRRANVALTRARHCLWILGDAATLLGSGSVWGELVRDAVDRR 833
Score = 46.0 bits (104), Expect = 2e-04
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 468 SLIQGPPGTGKTVTSATIVYQLV----RQNGGPVLVCAPSNTAVDQLTEKI 514
SLI GPPGTGKT T + ++ L+ Q+ VL CAP+NTA+ Q+ ++
Sbjct: 281 SLIWGPPGTGKTKTISVLLLMLMTTATSQSRYRVLTCAPTNTAISQVASRL 331
>03_04_0201 -
18409088-18409306,18409389-18409475,18409950-18410072,
18410175-18410534,18410610-18410694,18410780-18410838,
18411350-18411442,18411537-18411641,18411716-18411813,
18411988-18412093,18412186-18412308,18413163-18413198,
18413290-18413487,18413592-18413789,18414094-18414233,
18414356-18414497,18414591-18414731
Length = 770
Score = 159 bits (385), Expect = 1e-38
Identities = 121/390 (31%), Positives = 186/390 (47%), Gaps = 47/390 (12%)
Query: 497 VLVCAPSNTAVDQLTEKIHRTGLKVVRLCAKSREAMESSVSFLALHEQARALGSADSELR 556
VLVCAPSN+A+D++ ++ +TG++ + + + L H +A+ +
Sbjct: 341 VLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIG---LKAHHSVKAVS-----MD 392
Query: 557 KLTRLKEEAGELSXXXXXXXXXXXXXXXXXXXXXXXVICTTCVGAGDPRVARMR--FQSI 614
L + K + S ++ +T +G +RM F +
Sbjct: 393 YLIQQKLSGVDRSSDGGRRGAGEYDRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVV 452
Query: 615 LIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGI 674
+IDE Q+ VGD QL V+ A K G SLF+R G
Sbjct: 453 IIDEAAQA------------------VGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGF 494
Query: 675 RPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPD--RPMFFYVT 732
L++QYRMHPE+S FPS FYEG L++G ++R PW P F+
Sbjct: 495 PVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSKKR------PWHSYSCFGPFCFFDV 548
Query: 733 QGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVR-PE-----QIGIITPYEGQRSYLVQ 786
G E S++N E VE +T + + +R PE Q+ +I+PY Q L
Sbjct: 549 DGTESQPSGSGSWVNEDE---VEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKD 605
Query: 787 HMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTR 846
H ++ + + + I+V +VD FQG EK+++I SCVR N+ Q IGF+SD RR+NVA+TR
Sbjct: 606 H--FRSTFGDQSKEVIDVNTVDGFQGCEKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITR 663
Query: 847 AKYGLIVVGNPKVLSKQPLWNHLLAFYKER 876
A+ ++VVG+ L + WN+L+ KER
Sbjct: 664 ARSAVLVVGSASTLKEDKHWNNLVESAKER 693
>04_04_0915 -
29385926-29385952,29386069-29386285,29386367-29386622,
29386745-29387072,29387157-29387587,29388014-29388163,
29388212-29388398,29388709-29388750,29389007-29389555,
29389778-29390032
Length = 813
Score = 152 bits (369), Expect = 1e-36
Identities = 94/270 (34%), Positives = 143/270 (52%), Gaps = 11/270 (4%)
Query: 614 ILIDEGMQSTEPECMVPVVL-GARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 672
+++DE Q E E ++P+ L G +Q + +GD CQL +V K + A +S+FERL L
Sbjct: 497 LVVDEAAQLKECETLIPMQLPGIKQAVFIGDECQLPALVKSKISDNADFGRSVFERLSSL 556
Query: 673 GIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRPMFFYVT 732
G L +QYRM PE+S+FP FY+G + +G + + + P F V
Sbjct: 557 GYNKHLLNIQYRMRPEISKFPVASFYDGKISDGPNVVSKNYKRNILPGKMFGPYSFINVD 616
Query: 733 QGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGV---RPEQIGIITPYEGQRSYLVQHMQ 789
G E G S N E A V + R + V +G+++PY Q V+ +Q
Sbjct: 617 GGHETTEKHGRSLKNTIEVAAVLWIVRRLFEESVFLGSKLTVGVVSPYNAQ----VRAIQ 672
Query: 790 YQGSLHAKLYQE--IEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTRA 847
+ +Y + ++V SVD FQG E+D+II+S VRSN +GFL++ +R N+ALTRA
Sbjct: 673 EKIGKTYDMYDDFSVKVKSVDGFQGAEEDVIIISTVRSNRAGSVGFLTNLQRTNMALTRA 732
Query: 848 KYGLIVVGNPKVLS-KQPLWNHLLAFYKER 876
K+ L +VGN LS + +W ++ K R
Sbjct: 733 KHCLWIVGNGTTLSNSRSVWQKVVNDAKHR 762
>02_05_0329 -
27986261-27987372,27988632-27988638,27988999-27989128,
27989157-27989216,27989318-27989970,27990056-27990526
Length = 810
Score = 133 bits (322), Expect = 6e-31
Identities = 93/278 (33%), Positives = 132/278 (47%), Gaps = 29/278 (10%)
Query: 611 FQSILIDEGMQSTEPECMVPVVL-GARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 669
F +++DE Q E E ++P+ L G R +L+G QL +V + A +SLFERL
Sbjct: 113 FDLLVVDEAAQLKECESLIPLQLPGVRHAVLIGYEFQLPALVKSRVCEDAEFGRSLFERL 172
Query: 670 VVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRPMFF 729
LG L+VQYRMHP +S+FP FYE + +G + R + P F
Sbjct: 173 SSLGHPKHLLDVQYRMHPGISKFPVSSFYENKISDGENVLHRDYERKPLAGPMYGSYSFI 232
Query: 730 YVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAG--VRPEQIG--------------- 772
V G+E S +N E A V ++ R K + P G
Sbjct: 233 NVDAGKESKGKHDKSLMNPIEVAAVTRIVQRLFKGTHCIMPLHSGMASLSSDSLVCAESV 292
Query: 773 ---------IITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCV 823
+++PY+GQ + + + H ++V SVD FQG E+DIII S V
Sbjct: 293 DTGRKLCVGVVSPYKGQVRAIQERLGKAYETHGGF--TVKVRSVDGFQGAEEDIIIFSAV 350
Query: 824 RSNEHQGIGFLSDPRRLNVALTRAKYGLIVVGNPKVLS 861
RSN +GFLS+ R NVALTRAK+ L ++GN L+
Sbjct: 351 RSNTTGSVGFLSNVNRTNVALTRAKHCLWILGNANTLA 388
>04_04_0959 + 29692740-29693035,29693102-29693267,29693433-29693612,
29693703-29693771,29693888-29694088,29694187-29694240,
29694325-29694386,29694488-29694620,29694789-29694899,
29695008-29695104,29695638-29695714,29696129-29696194,
29696431-29696583,29697392-29697447,29697524-29697584,
29697656-29697766,29698010-29698144,29698217-29698447,
29699001-29699075,29699161-29699282,29699381-29699453,
29699538-29699642,29699728-29699895,29700079-29700148,
29700224-29700375,29700574-29700651,29700744-29700836,
29700961-29701098,29701237-29701276,29701350-29701423,
29701777-29701911,29702345-29702464,29702778-29702939
Length = 1287
Score = 132 bits (320), Expect = 1e-30
Identities = 101/298 (33%), Positives = 142/298 (47%), Gaps = 25/298 (8%)
Query: 593 VICTTCVGAGDPRVARMRFQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVM 652
V+ TC+G P +A +F + ++DE Q T P + P++L A + +LVGDH QL P+V
Sbjct: 976 VVGVTCLGIYHPLLAHKKFDTCIMDEAGQITLPVSLGPLML-ATKFVLVGDHYQLPPLVQ 1034
Query: 653 CKKAAKAGLSQSLFERLVVLGIRPFR-LEVQYRMHPELSRFPSDFFYEGSLQNGVSAEER 711
+A + G+ SLF RL + L QYRM + + Y L G
Sbjct: 1035 SSEARENGMGVSLFWRLSEAHPQAISALRCQYRMSSGIMELSNSLIYGNRLSCGSLEIAN 1094
Query: 712 RLHKIDFPWP---------RPDRPMFFYVTQGQEEI-AGSGTSYLNRTEAANVEKLTTRF 761
K+ P PDR + F T A + N TEA V +T
Sbjct: 1095 AKLKLSGRGPVRLKLKEILNPDRAVVFANTDEVPAFEAKEHRTVNNPTEALIVSWITNEL 1154
Query: 762 LKAGVRPEQIGIITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMS 821
LK GV + +GIITPY Q + + QH+ +EV ++D +QGR+K+ II+S
Sbjct: 1155 LKRGVAQDGVGIITPYNAQANLIQQHVD----------ASVEVHTIDKYQGRDKECIIVS 1204
Query: 822 CVRSNEH---QGIGFLSDPRRLNVALTRAKYGLIVVGNPKVLSKQPLWNHLLAFYKER 876
VRSN + G L D R+NV LTRAK LI+VG+ LS PL ++ ER
Sbjct: 1205 FVRSNGNTRASGSSLLGDWHRINVVLTRAKKKLIMVGSAATLSTIPLLRLMIEKVAER 1262
Score = 45.6 bits (103), Expect = 2e-04
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 447 NLPDLNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPSNT 505
+LP+LN Q ++ L + +LI G PGTGKT T V L+ G +L+ + +N+
Sbjct: 864 SLPNLNNDQQRSLHKILAAKDYALILGMPGTGKTYTMVHAVKSLL-MRGESILLTSYTNS 922
Query: 506 AVDQLTEKIHRTGLKVVRL 524
A+D L K+ G+ +R+
Sbjct: 923 AIDNLLMKLKAEGVDFLRI 941
>04_04_1035 +
30283456-30283536,30284823-30285359,30285508-30286512,
30286718-30287042,30287563-30287818,30287901-30288117,
30288743-30289095,30289330-30289833,30291267-30292467,
30292614-30292970,30293258-30293495,30294083-30295125,
30295234-30296649,30296731-30296855,30297036-30297314,
30297352-30297382,30298957-30299022,30299447-30299689,
30299848-30299898,30299980-30300071,30300182-30300249,
30300515-30300600,30300720-30300824,30300994-30301127,
30302403-30302436,30302620-30302892,30303019-30303288,
30303384-30303974,30304065-30304214
Length = 3376
Score = 128 bits (309), Expect = 2e-29
Identities = 91/249 (36%), Positives = 130/249 (52%), Gaps = 15/249 (6%)
Query: 644 HCQLGP--VVMCKKAAK----AGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFF 697
H ++ P V++ +AA+ AG SLFERLVVL L +QYRM P +S FP+ F
Sbjct: 525 HMEIAPLDVLIVDEAAQVCKEAGFGISLFERLVVLDFEKHLLNIQYRMDPRISLFPNVQF 584
Query: 698 YEGSLQNGVSAEERRLHKIDFPWPRPDRPMFFYVTQGQEEIAGSGTSYLNRTEAANVEKL 757
Y + +G + +K D+ F ++ G+EE G+G S+ N E A V L
Sbjct: 585 YGRKILDGPNVMSSVYNK-DYTNLPFGTYAFINISDGREEKEGTGNSWRNLVEVAVVLHL 643
Query: 758 TTRFLKAGVRPEQ---IGIITPYEGQRSYLVQHMQYQGSLHAKLYQ-EIEVASVDAFQGR 813
K R Q IG+I+PY Q + + G L+ + V SVD FQG
Sbjct: 644 IQTIFKTWKRKGQMLSIGVISPYSSQVDSIESRL---GKLYDTCDGFHVRVKSVDGFQGE 700
Query: 814 EKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTRAKYGLIVVGNPKVL-SKQPLWNHLLAF 872
E DIII+S VRSN +GFL+D +R NVALTRA++ L ++GN L S +W L+A
Sbjct: 701 EDDIIILSTVRSNVKGIVGFLADEQRTNVALTRARHCLWILGNANTLYSSGTVWKDLIAD 760
Query: 873 YKERRVLTE 881
+ R+ + +
Sbjct: 761 AQRRKCIID 769
Score = 39.1 bits (87), Expect = 0.018
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 450 DLNRSQVYAVKHALQRP-------LSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAP 502
+LN+SQV A++ + + LI GPPGTGKT T + +++ L L CAP
Sbjct: 222 NLNQSQVDAIESVISAVQCRHLNLMKLIWGPPGTGKTKTVSALLWALACLK-CRTLTCAP 280
Query: 503 SNTAV 507
+N A+
Sbjct: 281 TNVAI 285
>11_06_0561 -
24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 109 bits (263), Expect = 9e-24
Identities = 71/283 (25%), Positives = 137/283 (48%), Gaps = 9/283 (3%)
Query: 593 VICTTCVGAGDPRVARMRFQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVM 652
+ICT + + +L+D+ Q E + ++P+ R +++ GDH L P+V
Sbjct: 652 IICTPVCSSQLRELKLDTIDILLVDDAAQIKEIDMLIPLSFSPRHIVMFGDHLHLQPMVK 711
Query: 653 CKKAAKAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERR 712
+ +AG + SLF+RL+ RL QY M P +S+F S+ FYEG L++ + +
Sbjct: 712 SEVCKEAGYASSLFQRLMHSSSENKRLTKQYMMDPSISQFVSENFYEGRLKDDSTVKSDD 771
Query: 713 LHKIDFPWPRPDRPMFFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQIG 772
+K+ +P P F+ G +E+ G G ++ + + + + + +G
Sbjct: 772 YNKLLKEFPVP--AYGFFDISGVDELTGKGKGFVESSVIMFLLQFLCKGRTNAIGKINVG 829
Query: 773 IITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIG 832
II Y + L + + H ++ IEV S+ + D++I+S V + +
Sbjct: 830 IICLYNNRMDALRNLLGIKYENHDRI--NIEVNSLGNLHEKWYDVVILSSVSDEKAE--- 884
Query: 833 FLSDPRRLNVALTRAKYGLIVVGNPK-VLSKQPLWNHLLAFYK 874
L + ++NVA +R++Y L ++G K +++ + LW L+ + K
Sbjct: 885 -LLEGSKMNVAFSRSRYCLWIIGEGKNLIASEDLWKKLIGYAK 926
>04_04_0917 -
29404341-29404519,29404610-29404744,29404898-29405225,
29405313-29405532,29405653-29406647,29407233-29407493,
29407534-29407872,29409309-29409497
Length = 881
Score = 102 bits (244), Expect = 2e-21
Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 6/174 (3%)
Query: 612 QSILIDEGMQSTEPECMVPVVL-GARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLV 670
+ +++DE Q E E ++P+ L G Q +L+GD QL +V K A A +S+FERL
Sbjct: 625 EMLIVDEAAQLKECETLIPLQLPGITQAVLIGDEYQLPALVKSKIADNAFFGRSVFERLS 684
Query: 671 VLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRP-MFF 729
+LG L VQYRMHPE+SRFP FY+G + +G + + + F + P F
Sbjct: 685 LLGYSKHLLNVQYRMHPEISRFPVATFYDGKISDGSNVTSKNYER-KFLASKIFGPYSFI 743
Query: 730 YVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPE---QIGIITPYEGQ 780
V G E +G S N E A V ++ R K V + +G+++PY Q
Sbjct: 744 NVDGGHETAEKNGRSLKNTIEVATVLRIVQRLFKEAVSTQSKLSVGVVSPYNAQ 797
Score = 49.6 bits (113), Expect = 1e-05
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 11/93 (11%)
Query: 450 DLNRSQVYAVKHALQ------RPLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPS 503
+LN SQ+ AV + L LI GPPGTGKT T +TI++ ++ + G L CAP+
Sbjct: 290 NLNASQLNAVADCVSVMENQLSSLKLIWGPPGTGKTKTISTILWAMLIK-GRKTLTCAPT 348
Query: 504 NTAVDQLTEKIHRTGLKVVRLCAKSREAMESSV 536
NT++ ++ +I +++VR C+ S +
Sbjct: 349 NTSILEVASRI----VRLVRGCSDGSACFLSDI 377
>11_06_0557 -
24955837-24956214,24957225-24957395,24957576-24957635,
24958419-24958623,24958710-24958953,24959103-24959394,
24959734-24960828,24960915-24961409,24961665-24961823,
24961893-24962387
Length = 1197
Score = 94.7 bits (225), Expect = 3e-19
Identities = 69/259 (26%), Positives = 128/259 (49%), Gaps = 18/259 (6%)
Query: 614 ILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 673
+++D+ Q E + +VP+ + R ++L+GDH L P+V + +AG ++SLF+RL+ L
Sbjct: 708 LIVDKAAQIKENDLLVPLSIPPRHVVLLGDHQHLQPIVKTEGCKEAGCTRSLFQRLLHLS 767
Query: 674 IRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRPMFFYVTQ 733
+L QY MHP + +FPS+ FY+ + +G S E L FP F+
Sbjct: 768 FTRHKLIKQYMMHPLIRQFPSEHFYKDKIVDGQSVESINL---QFP------AYTFFDVV 818
Query: 734 GQEEIAGSGTSYLNRTEAA-NVEKLTTRFLKAGVRPEQIGIITPYEGQRSYLVQHMQYQG 792
E+ + G + ++KL A R +GI+ Q + ++ + +
Sbjct: 819 DMEDFSCMGKKSMEAAVVLFLLQKLCEGLTNAAGR-LNVGIVCFCSNQVNAIITQLGRKY 877
Query: 793 SLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTRAKYGLI 852
H ++ +EV S++ D+II+S + ++ + L R+NVALT++++ L
Sbjct: 878 QNHDRV--NLEVNSLENMHEDWYDVIILSSLFDDKSE----LPTDNRINVALTKSRHCLW 931
Query: 853 VVGNPKVLSKQP-LWNHLL 870
++G +L + P W L+
Sbjct: 932 IIGQADILLQIPGTWKSLI 950
>03_03_0186 + 15243150-15243563,15243685-15243777,15244604-15244666,
15245028-15245114,15245197-15245349,15245422-15245579,
15246458-15246692,15246782-15246892,15246942-15246968,
15247269-15248327,15248432-15248692,15249011-15249196,
15249642-15250793,15250886-15251236,15251343-15251738
Length = 1581
Score = 90.6 bits (215), Expect = 6e-18
Identities = 80/258 (31%), Positives = 126/258 (48%), Gaps = 24/258 (9%)
Query: 610 RFQSILIDEGMQSTEPECMVPVVLGARQ--------LILVGDHCQLGPVVMCKKAAK-AG 660
++ ++L++E Q E E +P++L ++ IL+GDH QL PVV K +
Sbjct: 1133 KYDNLLMEESAQILEIETFIPMLLQRQEDGYARLKRCILIGDHHQLPPVVKNMAFQKYSH 1192
Query: 661 LSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFFYE-GSLQNGVSAEERRLHKID-- 717
+ QSLF R V LG+ L Q R P ++ + + E G L EE HK +
Sbjct: 1193 MDQSLFTRFVRLGVPYIELNAQGRARPSIAELYNWRYRELGDLP--YVREEAIFHKANSG 1250
Query: 718 --FPWPRPDRPMFFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQIGIIT 775
+ + D P F +G+ E A S Y N EA + + G +I I+T
Sbjct: 1251 FSYDYQLVDVPDF----RGRGESAPSPWFYQNEGEAEFIVSVYIYMRLIGYPANKISILT 1306
Query: 776 PYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLS 835
Y GQ+ L++ + + + +V +VD FQG++ D I++S VR+ + +G L
Sbjct: 1307 TYNGQK-LLIRDVINRRCKPWNIEPPSKVTTVDKFQGQQNDFILLSLVRT---RFVGHLR 1362
Query: 836 DPRRLNVALTRAKYGLIV 853
D RRL VA++RA+ GL V
Sbjct: 1363 DVRRLIVAMSRARLGLYV 1380
Score = 40.7 bits (91), Expect = 0.006
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 454 SQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVRQ-NGGPVLVCAPSNTAVDQLTE 512
+Q+ A+ +Q L+++ GPPGTGKT T+ I+ L L+ SN A++ L E
Sbjct: 886 TQIGAIISGIQPGLTMVVGPPGTGKTDTAVQILNVLYHNCPSQRTLIITHSNQALNDLFE 945
Query: 513 KI 514
KI
Sbjct: 946 KI 947
>04_04_0918 -
29411239-29411373,29412276-29412526,29412772-29413009,
29413133-29414251,29414540-29415106
Length = 769
Score = 80.6 bits (190), Expect = 6e-15
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 598 CVGAGDPRVARMRFQSILIDEGMQSTEPECMVPVVLGA-RQLILVGDHCQLGPVVMCKKA 656
C + +++ + Q +++DE Q E E ++P+ L + IL+GD CQL V K
Sbjct: 505 CTVSSSSKISNKKLQLLVVDEAAQLKECEGLIPLRLPTLKHAILIGDECQLPATVKSKVC 564
Query: 657 AKAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKI 716
A +SLFERL LG L +QYRMHP +S FP+ FY+ L + + +++ K
Sbjct: 565 EDASFGRSLFERLSSLGHEKHLLNMQYRMHPSISIFPNISFYDRKLLDAPNVKQKEHRKK 624
Query: 717 DFP 719
P
Sbjct: 625 YLP 627
Score = 51.2 bits (117), Expect = 4e-06
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 468 SLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPSNTAVDQ--------LTEKIHRTGL 519
SLI GPPGTGKT T + +++ L+R+ L CAP+N AV Q + E R L
Sbjct: 242 SLIWGPPGTGKTKTISVLLW-LMREMDHGTLTCAPTNLAVKQVASRFLKVIKESSDRACL 300
Query: 520 KVVRLCA-KSREAMESSVSFLALHEQARAL 548
V LC K R ++ ++ + LH++ R L
Sbjct: 301 GDVLLCGNKQRMCVDGNLKEIYLHDRVRTL 330
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 771 IGIITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQG 830
+G+I PY Q + Q + G + +++ S D FQG E+DII +S VRSN
Sbjct: 652 VGVICPYTAQVLAIQQKL---GKMKFDPVI-VKINSGDGFQGGEEDIITLSTVRSNSDGA 707
Query: 831 IGFLSDP 837
+GFL P
Sbjct: 708 VGFLVKP 714
>11_06_0562 +
25003246-25003746,25004975-25005214,25005576-25006097,
25006184-25007248,25007350-25007656,25007761-25008001,
25008104-25008302,25008771-25008852,25008959-25009209,
25010061-25010219,25010220-25010603
Length = 1316
Score = 74.5 bits (175), Expect = 4e-13
Identities = 59/244 (24%), Positives = 114/244 (46%), Gaps = 20/244 (8%)
Query: 615 LIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGI 674
++D+ + E + ++P+ L ++++GD L P K A S + F+RL+ LG
Sbjct: 740 IVDDAAKINECDLIIPLRLPVTHILMLGDDFNLQP---SKVWENARFSMNPFKRLLNLGF 796
Query: 675 RPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRPMFFYVTQG 734
R L QY +HP + +FP++ FYEG + NG + +K F + F VT
Sbjct: 797 RKHMLTEQYAIHPSIWQFPNEKFYEGRITNGATVVSPEYNK-QFKGLKFPNYCFIDVT-- 853
Query: 735 QEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQ---IGIITPYEGQRSYLVQHMQYQ 791
G S N E A ++ + + + G+ + +G++ + + +
Sbjct: 854 ----GTDGPSCKNTIELATIQYM-LKIISQGLEDTEVIDVGVLCLCGSYVGGIKSSLGKK 908
Query: 792 GSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTRAKYGL 851
+ H K+ + + S D+F+G ++I+S + +E+ + ++N ALTRA++ L
Sbjct: 909 YATHNKI--NVHIESADSFEGETYHLVILSMLFKDENT----ILQIEKINAALTRARHCL 962
Query: 852 IVVG 855
+ G
Sbjct: 963 WMFG 966
Score = 41.9 bits (94), Expect = 0.003
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 448 LPDLNRSQVYAVKHALQ-------RPLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVC 500
L LN+ Q+Y++K + + + LIQGPPG+GKT + ++ Q++ VL+C
Sbjct: 440 LSHLNQQQLYSLKSIISAVHCRSNKHIELIQGPPGSGKTEITIALL-QVLHHMNLKVLLC 498
Query: 501 APSNTAVDQLT 511
AP V LT
Sbjct: 499 APKTNIVKFLT 509
>01_05_0201 -
19225597-19225890,19227832-19228030,19228133-19228321,
19228475-19228785,19228899-19229030
Length = 374
Score = 57.6 bits (133), Expect = 5e-08
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 614 ILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 673
+++D+ + E + ++P+ L ++++GD L P K A + S F+RL+ LG
Sbjct: 7 LIVDDAAKINECDLIIPLRLLVTHILMLGDDFNLQP---SKVRENARFTMSPFKRLLNLG 63
Query: 674 IRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVS 707
R L QY +HP + +F ++ FYEG + NG +
Sbjct: 64 FRKHMLTEQYAIHPSIWQFRNEKFYEGRITNGAT 97
>02_05_0330 - 27996080-27996757,27996836-27997366,27998124-27998303
Length = 462
Score = 49.2 bits (112), Expect = 2e-05
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 437 VHLPKHFSAPNLPD--LNRSQVYAVKHAL----QRPLS--LIQGPPGTGKTVTSATIVYQ 488
+HLP + L D LN+SQ AV + QR S LI GPPGTGKT T +T+++
Sbjct: 250 LHLPDR-ALGGLEDFKLNKSQKVAVLDCVSAMQQRSSSVRLIWGPPGTGKTKTISTLLWA 308
Query: 489 LVRQNGGPVLVCAPSNTAVDQLTEKI 514
++ +N L CAP+NTAV ++ ++
Sbjct: 309 MLVKN-HRTLTCAPTNTAVVEVASRV 333
>12_01_0489 +
3872495-3872538,3872663-3872741,3872835-3872914,
3873888-3874007,3874090-3874159,3874238-3874311,
3874393-3874513,3874600-3874662,3874748-3874807,
3875156-3875281,3875358-3875441,3875912-3876010
Length = 339
Score = 35.5 bits (78), Expect = 0.22
Identities = 15/24 (62%), Positives = 16/24 (66%)
Query: 466 PLSLIQGPPGTGKTVTSATIVYQL 489
P L GPPGTGKT T+ I YQL
Sbjct: 43 PHMLFYGPPGTGKTTTALAIAYQL 66
>05_03_0045 +
7752571-7752599,7754013-7754078,7754228-7754228,
7757535-7758380
Length = 313
Score = 35.1 bits (77), Expect = 0.29
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 882 GPLSNLKESAIQFAKPKKLVNSQNPGSHFMSTSMFDAREAMVPGSIYDRAR-PPRDPLAY 940
G L N+ + I+F + QN G F+ +F +V G+ + PP P A
Sbjct: 192 GVLVNILTNMIKFVVDGMIAKHQNTGPVFLPGGVFPPYRNLVTGNQHHTTNTPPVQPTAV 251
Query: 941 VGPERGALLHAPVPPAA 957
V P + APV P++
Sbjct: 252 VQPTAVVSVPAPVAPSS 268
>11_01_0515 +
4003167-4003229,4003318-4003738,4004224-4004367,
4004474-4004556,4004661-4004775,4005309-4005400,
4005558-4005612,4005689-4005834,4005888-4006001,
4006149-4006342,4006985-4007112,4008526-4008583,
4009800-4009876,4010214-4010263,4010336-4010515,
4010633-4010731,4010816-4011133,4011221-4011281,
4011693-4012781,4012951-4013005,4013133-4013291,
4013923-4014442
Length = 1406
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 468 SLIQGPPGTGKTVTSATIVYQLVRQ-NGGPVLVCAPSNTAVDQLTEKIHRT 517
+L+ P G GKT +A ++Y R G ++ AP+ V Q E H T
Sbjct: 182 TLVALPTGLGKTFIAAVVMYNYFRWFPEGKIVFTAPTRPLVTQQIEACHNT 232
>12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045
Length = 1294
Score = 31.1 bits (67), Expect = 4.8
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 467 LSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPSNTAVDQLTEKI--HRTGLKVVRL 524
LSLI G G GKT + + ++VR+N + VC V +T KI TG K
Sbjct: 242 LSLI-GHGGMGKTTLAQRVCEEMVRKNFKVIWVCVSDRFDVTSVTSKILESATGAKPNAN 300
Query: 525 CAKS 528
C ++
Sbjct: 301 CLET 304
>09_04_0093 - 14550806-14552452
Length = 548
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 179 AKADSVVVLLCRQPCAAQSSLKDMNW-----DQE--QWKPLISDRAFLSWLVKVPSETEQ 231
AK D+V ++ CA Q L+ W +QE QW+ ++ D A ++ VK + +
Sbjct: 288 AKVDAVTMVALLTACAEQGDLRLGRWVHAHVEQEGRQWRTVLLDNALINMYVKCGAVEDA 347
Query: 232 MRARQVTPQQ 241
R V P++
Sbjct: 348 HRLFLVMPRR 357
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.135 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,408,990
Number of Sequences: 37544
Number of extensions: 1243527
Number of successful extensions: 2815
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2703
Number of HSP's gapped (non-prelim): 56
length of query: 1032
length of database: 14,793,348
effective HSP length: 89
effective length of query: 943
effective length of database: 11,451,932
effective search space: 10799171876
effective search space used: 10799171876
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)
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