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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001540-TA|BGIBMGA001540-PA|IPR006935|Type III
restriction enzyme, res subunit
         (1032 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035...  1183   0.0  
02_05_0444 - 29073740-29073844,29074417-29074725,29077910-290779...   196   8e-50
03_05_0169 + 21474655-21474771,21474879-21474971,21475553-214756...   194   2e-49
09_01_0155 - 2301903-2302151,2302334-2302491,2302651-2302819,230...   183   8e-46
10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,117...   179   9e-45
10_08_0765 - 20421813-20423174,20423591-20423771,20423862-204241...   170   4e-42
06_02_0092 - 11624905-11625123,11625206-11625292,11625767-116258...   162   2e-39
03_01_0417 - 3197956-3198438,3198550-3200001,3200116-3200277,320...   160   5e-39
04_03_0946 + 20975955-20976095,20976189-20976330,20976449-209765...   159   8e-39
04_04_0919 - 29422003-29422267,29422411-29422660,29423163-294234...   159   1e-38
03_04_0201 - 18409088-18409306,18409389-18409475,18409950-184100...   159   1e-38
04_04_0915 - 29385926-29385952,29386069-29386285,29386367-293866...   152   1e-36
02_05_0329 - 27986261-27987372,27988632-27988638,27988999-279891...   133   6e-31
04_04_0959 + 29692740-29693035,29693102-29693267,29693433-296936...   132   1e-30
04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865...   128   2e-29
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859...   109   9e-24
04_04_0917 - 29404341-29404519,29404610-29404744,29404898-294052...   102   2e-21
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576...    95   3e-19
03_03_0186 + 15243150-15243563,15243685-15243777,15244604-152446...    91   6e-18
04_04_0918 - 29411239-29411373,29412276-29412526,29412772-294130...    81   6e-15
11_06_0562 + 25003246-25003746,25004975-25005214,25005576-250060...    75   4e-13
01_05_0201 - 19225597-19225890,19227832-19228030,19228133-192283...    58   5e-08
02_05_0330 - 27996080-27996757,27996836-27997366,27998124-27998303     49   2e-05
12_01_0489 + 3872495-3872538,3872663-3872741,3872835-3872914,387...    36   0.22 
05_03_0045 + 7752571-7752599,7754013-7754078,7754228-7754228,775...    35   0.29 
11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367,400...    31   3.6  
12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045           31   4.8  
09_04_0093 - 14550806-14552452                                         31   6.3  

>07_03_0471 +
           18501496-18502104,18503009-18503260,18503367-18503537,
           18503693-18503743,18503868-18503960,18504125-18504220,
           18504318-18504368,18504452-18504570,18504909-18505017,
           18505391-18505513,18505590-18505661,18505963-18506034,
           18506125-18506191,18506260-18506402,18506494-18506565,
           18506632-18506760,18507317-18507472,18507579-18507692,
           18507791-18507889,18507974-18508051,18508402-18508536,
           18509081-18509155,18509247-18509361,18509458-18509828,
           18509903-18509965,18510049-18510120,18510285-18510413,
           18510512-18510628,18510902-18511018
          Length = 1289

 Score = 1183 bits (2929), Expect = 0.0
 Identities = 542/821 (66%), Positives = 652/821 (79%), Gaps = 6/821 (0%)

Query: 88  EDEALYSNKELPDHACKYCGIHDPATVVMCNI--CNKWFCNGRGNTSGSHIINHLVRAKH 145
           ED   Y   +  +HAC+YCGIH+PA V  CN+  C KWFCN RGNTSGSHI+NHLVRAKH
Sbjct: 149 EDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKH 208

Query: 146 KEAALHRDGPLGETLLECYSCGARNVFVLGFIPAKADSVVVLLCRQPCAAQSSLKDMNWD 205
           KE  LH+D PLGET+LECY+CG RNVF+LGFI AKA++VVVLLCR+PC + ++LKDMNWD
Sbjct: 209 KEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKAENVVVLLCREPCLSVNALKDMNWD 268

Query: 206 QEQWKPLISDRAFLSWLVKVPSETEQMRARQVTPQQIGRLEELWRDNVDATFQDLEKPGV 265
             QW PLI DR FLSWLVKVPSE EQ+RARQ++ QQI ++EELW+ N DA+ +DLEKPGV
Sbjct: 269 LSQWCPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGV 328

Query: 266 DEEPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQEGIEVRWDVGLNKKTIAYF 325
           D+EP QV L+YED YQYQN+F PL+KLEADYDK +KESQ+++ + VRWD+GLNKK IAYF
Sbjct: 329 DDEPQQVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDSLTVRWDIGLNKKRIAYF 388

Query: 326 TLAKTDSDMKLMHGDELRLRYVGEM-HKAWSGVGHVIKVPDNYGDDVGLELKSGAGAPLD 384
              K D++++L+ GDELRLRY G+  H AW  VGHVIK+     ++V LEL++  G P+D
Sbjct: 389 VFPKEDNELRLVPGDELRLRYSGDSSHPAWQSVGHVIKLTAQ--EEVALELRASQGVPVD 446

Query: 385 CTSNFVVDFIWKSTSFDRMQLALRKFALDDSSVSGYIYRRLLGHEVEEVLFRVHLPKHFS 444
               F VDF+WKSTSFDRMQ A++ FA+D++SVSGYIY  LLGHEVE  + R  LP+ F 
Sbjct: 447 LNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFG 506

Query: 445 APNLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPSN 504
           AP LP+LN SQV AVK  LQ+P+SLIQGPPGTGKTVTSA IVY + +Q  G VLVCAPSN
Sbjct: 507 APGLPELNASQVLAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSN 566

Query: 505 TAVDQLTEKIHRTGLKVVRLCAKSREAMESSVSFLALHEQARALGSAD-SELRKLTRLKE 563
            AVDQL EKI  TGLKVVRLCAKSREA+ S V  L LH Q R L +++ SEL KL +LK+
Sbjct: 567 VAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKD 626

Query: 564 EAGELSXXXXXXXXXXXXXXXXXXXXXXXVICTTCVGAGDPRVARMRFQSILIDEGMQST 623
           E GELS                       VIC TCVGAGDPR+A  RF+ +LIDE  Q+T
Sbjct: 627 EQGELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLANFRFRQVLIDESTQAT 686

Query: 624 EPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPFRLEVQY 683
           EPEC++P+VLG +Q++LVGDHCQLGPV+MCKKAA+AGL+QSLFERLV+LG++PFRL+VQY
Sbjct: 687 EPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQY 746

Query: 684 RMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRPMFFYVTQGQEEIAGSGT 743
           RMHP LS FPS+ FYEG+LQNGV+  ER+   IDFPWP P+RPMFFYV  GQEEI+ SGT
Sbjct: 747 RMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDFPWPVPNRPMFFYVQMGQEEISASGT 806

Query: 744 SYLNRTEAANVEKLTTRFLKAGVRPEQIGIITPYEGQRSYLVQHMQYQGSLHAKLYQEIE 803
           SYLNRTEAANVEK+ T FL++GV P QIG+ITPYEGQR+Y+V +M   GSL  +LY+EIE
Sbjct: 807 SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIE 866

Query: 804 VASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTRAKYGLIVVGNPKVLSKQ 863
           VASVD+FQGREKD II+SCVRSNEHQGIGFL+DPRRLNVALTRA+YG++++GNPKVLSKQ
Sbjct: 867 VASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQ 926

Query: 864 PLWNHLLAFYKERRVLTEGPLSNLKESAIQFAKPKKLVNSQ 904
           PLWN LL  YKE   L EGPL+NLK+S +QF KPKK+ N +
Sbjct: 927 PLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDR 967


>02_05_0444 -
           29073740-29073844,29074417-29074725,29077910-29077981,
           29078541-29078633,29078825-29078982,29079247-29079415,
           29080204-29081241,29081632-29081759,29081926-29081985,
           29082033-29083077
          Length = 1058

 Score =  196 bits (478), Expect = 8e-50
 Identities = 153/440 (34%), Positives = 223/440 (50%), Gaps = 38/440 (8%)

Query: 451 LNRSQVYAVKHAL--QRPLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPSNTAVD 508
           L+ SQ+ A+   L  +RP+ +IQGPPGTGKTV    ++ + V+Q G  VLV APSN AVD
Sbjct: 472 LDASQLKALSLGLNKKRPVLIIQGPPGTGKTVLLTELIVRAVQQ-GENVLVTAPSNAAVD 530

Query: 509 QLTEKIHRTGLKVVRLCAKSREAMESSVSFLA------LHEQARALGSADSELRK-LTRL 561
            + E++  TGL +VR+   +R +   +   LA      L +  + L    S+LRK L+  
Sbjct: 531 NMVERLSNTGLNIVRVGNPARISPSVASKSLAEIVNGRLEQFRKELERKRSDLRKDLSYC 590

Query: 562 KEE----AG--ELSXXXXXXXXXXXXXXXXXXXXXXXVICTTCVGAGDPRVARMR-FQSI 614
            E+    AG  +L                        V+ +T  GA DP + R   F  +
Sbjct: 591 IEDDSLAAGIRQLLKQLGRDLEKKEKEMIREALSEAQVVLSTNTGAADPLIRRTCCFDLV 650

Query: 615 LIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL-- 672
           +IDE  Q+ EP C +P++ G R  IL GDHCQL PV++ +KA   GL +SL ER   L  
Sbjct: 651 IIDEAGQAIEPSCWIPILQGKR-CILAGDHCQLAPVILSRKALDGGLGKSLLERASSLHN 709

Query: 673 GIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHK---IDFPW----P---- 721
           G+   RL VQ+RM+  ++ + S   Y G L++  S   + L     +   W    P    
Sbjct: 710 GLLTTRLTVQHRMNDSIASWASKEMYHGLLKSSHSVASQTLADSPVVKATWITRCPLLLL 769

Query: 722 RPDRPMFFYVTQGQEEIAGSGT-SYLNRTEAANVEKLTTRFLKAGVRPEQIGIITPYEGQ 780
               P     T   E+I  SGT S+ N  EA  V +     +  GV P  I + +PY  Q
Sbjct: 770 DTRMPYGALDTGCGEQIDLSGTGSFYNDGEADIVTQHVLNLVHCGVSPTAIAVQSPYIAQ 829

Query: 781 RSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRL 840
              L + ++    L       +EV+++D+FQGRE D +++S VRSN    +GFL D RR+
Sbjct: 830 VQLLRERLEEYPGLSG-----VEVSTIDSFQGREADAVVISMVRSNPLGAVGFLGDSRRM 884

Query: 841 NVALTRAKYGLIVVGNPKVL 860
           NVA+TRA    + VG P ++
Sbjct: 885 NVAITRA-CRHVTVGPPYIV 903


>03_05_0169 +
           21474655-21474771,21474879-21474971,21475553-21475642,
           21475728-21475811,21476088-21476252,21476995-21477182,
           21477363-21477435,21477766-21477819,21478019-21478276,
           21478891-21479097,21479293-21479396,21479809-21479953,
           21480108-21480242,21480610-21480783
          Length = 628

 Score =  194 bits (474), Expect = 2e-49
 Identities = 142/451 (31%), Positives = 226/451 (50%), Gaps = 27/451 (5%)

Query: 445 APNLPDLNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPS 503
           +P   +L+ SQ  A+  AL+ R + L+ GPPGTGKT T   I+ Q V++ G  +L CA S
Sbjct: 173 SPFNKNLDESQKDAISKALRSRDVFLLHGPPGTGKTTTIIEIILQEVKR-GSKILACAAS 231

Query: 504 NTAVDQLTEKIHRTGLKVVRLCAKSR---EAMESSVSFLALHEQARAL-GSADSELR--- 556
           N AVD + E++ R   K+VRL   +R   + ++S++    L     +L G    E++   
Sbjct: 232 NIAVDNIVERLSRYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEMKVLN 291

Query: 557 -KLTRLKEEAGELSXXXXXXXXXXXXXXXXXXXXX-----XXVICTTCVGAGDPRVARMR 610
            KL + K++  +                              V+ +T  GA   ++  + 
Sbjct: 292 SKLLKAKDKNTKRDIRKELRTLAKEERKRQQLAVADVIKNADVVLSTLTGASSKKLDGIT 351

Query: 611 FQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLV 670
           F  ++IDE  Q+ E  C + ++ G R  +L GDH QL P +   +A K G+ ++LFERL 
Sbjct: 352 FDLVIIDEAAQALEMACWIALLKGPR-CVLAGDHLQLPPTIQSAEAEKKGMGKTLFERLT 410

Query: 671 -VLGIR-PFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKID-FPWPRPDRPM 727
              G +    L +QYRMH  +  + S   Y   ++   S  +  L+ I+         P 
Sbjct: 411 EAYGDQITSMLTIQYRMHELIMNWSSKELYNNKIKAHSSVADHMLYDIEEVKRSSSTEPT 470

Query: 728 FFYV-TQG--QEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQIGIITPYEGQRSYL 784
              + T G   EE+     S +N  EAA         +++GVR   IGIITPY  Q    
Sbjct: 471 IILIDTTGCDMEEVKDEEESTMNEGEAAVSIAHAKLLVESGVRASDIGIITPYAAQ---- 526

Query: 785 VQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVAL 844
           V  ++   +   KL +++E+++VD FQGREK+ II+S VRSN  + +GFLSD RR+NVA+
Sbjct: 527 VTCLKMMRNKDTKL-KDLEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVAV 585

Query: 845 TRAKYGLIVVGNPKVLSKQPLWNHLLAFYKE 875
           TRA+    +V + + +S       L+ +++E
Sbjct: 586 TRARRQCCLVCDVETVSNDKFLKRLVEYFEE 616


>09_01_0155 -
           2301903-2302151,2302334-2302491,2302651-2302819,
           2303796-2304839,2305792-2306075,2306318-2307333,
           2307937-2308085
          Length = 1022

 Score =  183 bits (445), Expect = 8e-46
 Identities = 149/463 (32%), Positives = 228/463 (49%), Gaps = 45/463 (9%)

Query: 447 NLPDLNRSQVYAVKHAL--QRPLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPSN 504
           N  D + SQ+ A+   L  +RP+ +IQGPPGTGKT   + ++   VR+ G  VLV APSN
Sbjct: 542 NKYDFDASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSYLIACAVRK-GERVLVTAPSN 600

Query: 505 TAVDQLTEKIHRTGLKVVRLCAKSREAMESSVSFLALHEQA-RALGSADSEL-RKLTRLK 562
            AVD + EK+  TGL  VR+   +R  +  SV+  +L E   R L     E  RK + L+
Sbjct: 601 AAVDNMVEKLSDTGLDTVRVGNPAR--ISPSVASRSLGELVNRRLQKFTEEFERKKSDLR 658

Query: 563 EE-----------AG--ELSXXXXXXXXXXXXXXXXXXXXXXXVICTTCVGAGDPRVARM 609
           ++           AG  +L                        V+ +T +GA DP V R+
Sbjct: 659 KDLKHCIQDDTLAAGIRQLLKQLGKNFKKKEKEIIREVLSNADVVLSTNIGAADPLVRRI 718

Query: 610 R-FQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFER 668
             F  ++IDE  Q+ EP C +P++ G R  IL GD  QL PVV+ ++A + GL+ SL ER
Sbjct: 719 GCFDLVIIDEAGQAIEPSCWIPILQGKR-CILAGDQRQLAPVVLSREAMQGGLAMSLLER 777

Query: 669 LVVL--GIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRP--- 723
              L   +   +L  QYRMH  ++ + S+  Y+G L++  S     L   D+P+ +    
Sbjct: 778 ASSLHNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLL--ADYPFIKETWI 835

Query: 724 DRPMFFYV----------TQGQEEIAGSGT-SYLNRTEAANVEKLTTRFLKAGVRPEQIG 772
            R  F  +             +E +  +GT S+ N  EA  V +     ++ GV P  I 
Sbjct: 836 TRCAFLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHVLNLVQCGVSPTAIA 895

Query: 773 IITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIG 832
           + +PY  Q   L   ++            +EV+++D+FQGRE D +++S VRSN    +G
Sbjct: 896 VQSPYIAQVQLLRDRLEDYPEASG-----VEVSTIDSFQGREADAVVISMVRSNTLGAVG 950

Query: 833 FLSDPRRLNVALTRAKYGLIVVGNPKVLSKQPLWNHLLAFYKE 875
           FL D RR+NVA+TRA+  + +V +   +        LL   ++
Sbjct: 951 FLGDNRRMNVAITRARRHVALVCDSSTICNNAFLARLLRHIRQ 993


>10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,
            1172998-1173381,1173478-1175253,1175329-1175452,
            1176859-1177027,1177131-1177226,1177339-1177527,
            1177965-1179303
          Length = 1468

 Score =  179 bits (436), Expect = 9e-45
 Identities = 123/352 (34%), Positives = 184/352 (52%), Gaps = 13/352 (3%)

Query: 533  ESSVSFLALHEQARALGSADSELRKLTRLKEEAGELSXXXXXXXXXXXXXXXXXXXXXXX 592
            + S  FL L + A ++ S D  L +++RL                               
Sbjct: 911  DRSRDFL-LQKLAASVESRDKVLVEMSRLLILESRFRVGSNFNMEDARASLEASFANEAE 969

Query: 593  VICTTCVGAGDPRVARMR--FQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPV 650
            ++ TT   +G    +R+   F  ++IDE  Q++E   + P+ LGA + +LVGD  QL   
Sbjct: 970  IVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAVLPPLSLGAARCVLVGDPQQLPAT 1029

Query: 651  VMCKKAAKAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEE 710
            V+ K A     S+SLFER  + G     L VQYRMHP++  FPS  FY+G L +  S   
Sbjct: 1030 VISKAAGTLMYSRSLFERFQLSGCPTILLSVQYRMHPQIREFPSRHFYQGRLTDSESVV- 1088

Query: 711  RRLHKIDFPWPRPDRPMFFY-VTQGQEEIAGSGTSYLNRTEAANVEKL---TTRFLKA-G 765
             +L    +       P  FY ++ G+E   G  +SY N  EA  V +L     +FL+A G
Sbjct: 1089 -KLPDEAYYRDALMAPYIFYDISHGRESHRGGSSSYQNVHEAQFVLRLYENLQKFLRANG 1147

Query: 766  VRPEQIGIITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRS 825
             +   +GIITPY+ Q   L    +++  +  +  ++I + +VDAFQG+E+D+IIMSCVR+
Sbjct: 1148 GKKASVGIITPYKLQLKCL--QREFEEVMSTEDGKDIYINTVDAFQGQERDVIIMSCVRA 1205

Query: 826  NEHQGIGFLSDPRRLNVALTRAKYGLIVVGNPKVLSKQPLWNHLLAFYKERR 877
            + H G+GF++D RR+NVALTRA+  L VVGN   L +   W  L+A  K R+
Sbjct: 1206 SNH-GVGFVADIRRMNVALTRARRALWVVGNAGALMQSEDWALLIADAKARK 1256



 Score = 35.5 bits (78), Expect = 0.22
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 8/55 (14%)

Query: 435 FRVHLPKHFSAPNLPDLNRSQVY--------AVKHALQRPLSLIQGPPGTGKTVT 481
           F  HL + F+ P L  ++ + ++        AVK     P +L+QGPPGTGKT T
Sbjct: 670 FADHLHRTFNGPQLSAIHWAAMHTAAGTSNGAVKKQEPWPFTLVQGPPGTGKTHT 724


>10_08_0765 -
           20421813-20423174,20423591-20423771,20423862-20424117,
           20424768-20425095,20425218-20426156,20427015-20427761,
           20428517-20428789
          Length = 1361

 Score =  170 bits (414), Expect = 4e-42
 Identities = 101/273 (36%), Positives = 147/273 (53%), Gaps = 7/273 (2%)

Query: 609 MRFQSILIDEGMQSTEPECMVPVVL-GARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFE 667
           M    ++IDE  Q  E E +VP++L G   ++L+GD  QL  +V  K A  A   +SL+E
Sbjct: 607 MPISILVIDEAAQLKECEALVPLLLPGIEHILLIGDENQLSSLVKSKIAKDADFGRSLYE 666

Query: 668 RLVVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRPM 727
           RL  +G R   LEVQYRMHP +++FP+  FY+  + +G S ++    K   P P      
Sbjct: 667 RLCTMGYRKHLLEVQYRMHPGINKFPNANFYDNRISDGPSVQQEDYMKSYLPGPIYGAYS 726

Query: 728 FFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQ---IGIITPYEGQRSYL 784
           F ++    E +   G S  N  E A    +  R  K      Q   +G+I+PY  Q   L
Sbjct: 727 FIHIENDMEMLDELGQSSKNMVEVAVATNIVERLAKECSEKRQRTSLGVISPYTAQVIAL 786

Query: 785 VQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVAL 844
            + +  Q   H   +  + V S+D FQG E+DII++S VRSN++  +GFLSD  R+NVAL
Sbjct: 787 QERLGKQFKNHE--FLSVTVKSIDGFQGGEEDIILISTVRSNKNGKVGFLSDAGRINVAL 844

Query: 845 TRAKYGLIVVGN-PKVLSKQPLWNHLLAFYKER 876
           TRAKY L ++GN   +L+   +W  L+   K R
Sbjct: 845 TRAKYCLWILGNGATLLASNSIWAELVHDSKRR 877


>06_02_0092 -
           11624905-11625123,11625206-11625292,11625767-11625889,
           11625992-11626351,11626427-11626511,11626603-11626661,
           11627173-11627265,11627360-11627464,11627539-11627636,
           11627811-11627916,11628009-11628131,11628986-11629021,
           11629113-11629310,11629415-11629612,11629917-11630056,
           11630181-11630322,11630416-11630556
          Length = 770

 Score =  162 bits (393), Expect = 2e-39
 Identities = 122/390 (31%), Positives = 187/390 (47%), Gaps = 47/390 (12%)

Query: 497 VLVCAPSNTAVDQLTEKIHRTGLKVVRLCAKSREAMESSVSFLALHEQARALGSADSELR 556
           VLVCAPSN+A+D++  ++ +TG++       + + +      L  H   +A+      + 
Sbjct: 341 VLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIG---LKAHHSVKAVS-----MD 392

Query: 557 KLTRLKEEAGELSXXXXXXXXXXXXXXXXXXXXXXXVICTTCVGAGDPRVARMR--FQSI 614
            L + K    + S                       ++ +T   +G    +RM   F  +
Sbjct: 393 YLIQQKLSGVDRSSDGGRRGAGEYDRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVV 452

Query: 615 LIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGI 674
           +IDE  Q+                  VGD  QL   V+   A K G   SLF+R    G 
Sbjct: 453 IIDEAAQA------------------VGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGF 494

Query: 675 RPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPD--RPMFFYVT 732
               L++QYRMHPE+S FPS  FYEG L++G    ++R      PW       P  F+  
Sbjct: 495 PVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSKKR------PWHSYSCFGPFCFFDV 548

Query: 733 QGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVR-PE-----QIGIITPYEGQRSYLVQ 786
            G E       S++N  E   VE +T  + +  +R PE     Q+ +I+PY  Q   L  
Sbjct: 549 DGTESQPSGSGSWVNEDE---VEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKD 605

Query: 787 HMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTR 846
           H  ++ +   +  + I+V +VD FQGREK+++I SCVR N+ Q IGF+SD RR+NVA+TR
Sbjct: 606 H--FRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITR 663

Query: 847 AKYGLIVVGNPKVLSKQPLWNHLLAFYKER 876
           A+  ++VVG+   L +   WN+L+   KER
Sbjct: 664 ARSAVLVVGSASTLKEDKHWNNLVESAKER 693


>03_01_0417 -
           3197956-3198438,3198550-3200001,3200116-3200277,
           3200351-3201133
          Length = 959

 Score =  160 bits (389), Expect = 5e-39
 Identities = 111/308 (36%), Positives = 164/308 (53%), Gaps = 30/308 (9%)

Query: 606 VARMRFQSILIDEGMQSTEPECMVPVV-LGARQ--LILVGDHCQLGPVVMCKKAAKAGLS 662
           + R  F  I +DE  Q++EPE MVP+  L  R   ++L GD  QLGPVV CK+A K GL 
Sbjct: 531 IRRGHFTHIFLDEAGQASEPEAMVPLSGLCGRDTVVVLAGDPMQLGPVVYCKQAEKDGLG 590

Query: 663 QSLFERLVV------LGIRPF--RLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLH 714
           +S  +RL+        G   +  +L   YR HP +   PS+ FY G L   ++ +E  + 
Sbjct: 591 KSYLQRLLFEYEQYSTGDPNYVTKLVRNYRCHPAILELPSELFYGGEL---IACKEDEVS 647

Query: 715 KI--DFPWPRPDRPMFFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAG-VRPEQI 771
            I      P    P+ F   QG +E  G+  S+ NR EA+ V  +     + G VR   I
Sbjct: 648 SIYDSIDLPNKSFPVLFVGIQGCDEREGNNPSWFNRIEASKVVNIIRNLTRGGDVREADI 707

Query: 772 GIITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRS----NE 827
           G+ITPY  Q       ++ + +L      +++V SV+ FQG+E++III+S VRS    NE
Sbjct: 708 GVITPYRQQV------VKIKKALETFEMPDLKVGSVEQFQGQEREIIIISTVRSTVKHNE 761

Query: 828 HQ---GIGFLSDPRRLNVALTRAKYGLIVVGNPKVLSKQPLWNHLLAFYKERRVLTEGPL 884
                 +GFLS+ RR NVA+TRAK  LI++GNP +++K   W+ LL +  +       PL
Sbjct: 762 FDKFFNLGFLSNHRRFNVAITRAKSLLIIIGNPHIITKDRHWDRLLRYCADNGSYQGCPL 821

Query: 885 SNLKESAI 892
              +E+ +
Sbjct: 822 PPPEETQV 829



 Score = 45.2 bits (102), Expect = 3e-04
 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 9/103 (8%)

Query: 446 PNLPDLNRSQVYAVKHALQ-RPLS--LIQGPPGTGKTVTSATIVYQL-VRQNGGPVLVCA 501
           P  P +N  Q  AV   L  R ++  +I GPPGTGKT+T    + QL   +    VL+CA
Sbjct: 390 PLNPHINTEQADAVATILGCRGVAPYVIYGPPGTGKTMTLVESILQLYTAKRRANVLICA 449

Query: 502 PSNTAVDQLTEKIHRTGL-----KVVRLCAKSREAMESSVSFL 539
            SN+A D +  K+ +         + RL A SR+  +    F+
Sbjct: 450 ASNSAADHVLAKLLQASYLIRPSDIFRLNAASRQYEDVDPDFI 492


>04_03_0946 +
           20975955-20976095,20976189-20976330,20976449-20976588,
           20976893-20977090,20977195-20977392,20977484-20977519,
           20978374-20978496,20978589-20978694,20978869-20978966,
           20979041-20979145,20979240-20979332,20979842-20979900,
           20979984-20980068,20980144-20980503,20980606-20980728,
           20981203-20981289,20981372-20981590
          Length = 770

 Score =  159 bits (387), Expect = 8e-39
 Identities = 121/390 (31%), Positives = 186/390 (47%), Gaps = 47/390 (12%)

Query: 497 VLVCAPSNTAVDQLTEKIHRTGLKVVRLCAKSREAMESSVSFLALHEQARALGSADSELR 556
           VLVCAPSN+A+D++  ++ + G++       + + +      L  H   +A+      + 
Sbjct: 341 VLVCAPSNSALDEIVLRVLQIGIRDENNNTYNPKIVRIG---LKAHHSVKAVS-----MD 392

Query: 557 KLTRLKEEAGELSXXXXXXXXXXXXXXXXXXXXXXXVICTTCVGAGDPRVARMR--FQSI 614
            L + K    + S                       ++ +T   +G    +RM   F  +
Sbjct: 393 YLIQQKLSGVDRSSDGGRRGAGEYDRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVV 452

Query: 615 LIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGI 674
           +IDE  Q+                  VGD  QL   V+   A K G   SLF+R    G 
Sbjct: 453 IIDEAAQA------------------VGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGF 494

Query: 675 RPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPD--RPMFFYVT 732
               L++QYRMHPE+S FPS  FYEG L++G    ++R      PW       P  F+  
Sbjct: 495 PVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSKKR------PWHSYSCFGPFCFFDV 548

Query: 733 QGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVR-PE-----QIGIITPYEGQRSYLVQ 786
            G E       S++N  E   VE +T  + +  +R PE     Q+ +I+PY  Q   L  
Sbjct: 549 DGTESQPSGSGSWVNEDE---VEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKD 605

Query: 787 HMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTR 846
           H  ++ +   +  + I+V +VD FQGREK+++I SCVR N+ Q IGF+SD RR+NVA+TR
Sbjct: 606 H--FRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITR 663

Query: 847 AKYGLIVVGNPKVLSKQPLWNHLLAFYKER 876
           A+  ++VVG+   L +   WN+L+   KER
Sbjct: 664 ARSAVLVVGSASTLKEDKHWNNLVESAKER 693


>04_04_0919 -
           29422003-29422267,29422411-29422660,29423163-29423481,
           29423625-29424794,29424879-29425388,29425449-29425607
          Length = 890

 Score =  159 bits (386), Expect = 1e-38
 Identities = 106/286 (37%), Positives = 154/286 (53%), Gaps = 14/286 (4%)

Query: 598 CVGAGDPRVARMRFQSILIDEGMQSTEPECMVPV-VLGARQLILVGDHCQLGPVVMCKKA 656
           C  +G  ++   +   +LIDE  Q  E E ++P+ V G +  +L+GD CQL   V  K A
Sbjct: 556 CTVSGSAKLYEQKMDLLLIDEAAQLKECESLIPLQVSGLKHAVLIGDECQLPATVKSKAA 615

Query: 657 AKAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKI 716
             A L +SLFERL +LG +   L +QYRMHP +S FP+  FY+  + +G +    R H+ 
Sbjct: 616 DGALLGRSLFERLTLLGHQKHLLNMQYRMHPSISIFPNFSFYDKKILDGPNVTHVR-HER 674

Query: 717 DFPWPRPDRP-MFFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQ---IG 772
            F       P  F  +  G+E+    G +  N  E A ++K+     KA V   +   +G
Sbjct: 675 SFLQGAMFGPYSFINIENGRED---PGRNKRNMAEVAAIKKILHNLCKACVGTGEGVSVG 731

Query: 773 IITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIG 832
           II PY  Q    V+ +Q     +A    ++ V SVD FQG E+DIII+S VRSN    IG
Sbjct: 732 IICPYAAQ----VEAIQSGIDANAVRPLDVRVNSVDGFQGSEEDIIILSTVRSNSTGSIG 787

Query: 833 FLSDPRRLNVALTRAKYGLIVVGN-PKVLSKQPLWNHLLAFYKERR 877
           FLS+ RR NVALTRA++ L ++G+   +L    +W  L+    +RR
Sbjct: 788 FLSNRRRANVALTRARHCLWILGDAATLLGSGSVWGELVRDAVDRR 833



 Score = 46.0 bits (104), Expect = 2e-04
 Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 4/51 (7%)

Query: 468 SLIQGPPGTGKTVTSATIVYQLV----RQNGGPVLVCAPSNTAVDQLTEKI 514
           SLI GPPGTGKT T + ++  L+     Q+   VL CAP+NTA+ Q+  ++
Sbjct: 281 SLIWGPPGTGKTKTISVLLLMLMTTATSQSRYRVLTCAPTNTAISQVASRL 331


>03_04_0201 -
           18409088-18409306,18409389-18409475,18409950-18410072,
           18410175-18410534,18410610-18410694,18410780-18410838,
           18411350-18411442,18411537-18411641,18411716-18411813,
           18411988-18412093,18412186-18412308,18413163-18413198,
           18413290-18413487,18413592-18413789,18414094-18414233,
           18414356-18414497,18414591-18414731
          Length = 770

 Score =  159 bits (385), Expect = 1e-38
 Identities = 121/390 (31%), Positives = 186/390 (47%), Gaps = 47/390 (12%)

Query: 497 VLVCAPSNTAVDQLTEKIHRTGLKVVRLCAKSREAMESSVSFLALHEQARALGSADSELR 556
           VLVCAPSN+A+D++  ++ +TG++       + + +      L  H   +A+      + 
Sbjct: 341 VLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIG---LKAHHSVKAVS-----MD 392

Query: 557 KLTRLKEEAGELSXXXXXXXXXXXXXXXXXXXXXXXVICTTCVGAGDPRVARMR--FQSI 614
            L + K    + S                       ++ +T   +G    +RM   F  +
Sbjct: 393 YLIQQKLSGVDRSSDGGRRGAGEYDRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVV 452

Query: 615 LIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGI 674
           +IDE  Q+                  VGD  QL   V+   A K G   SLF+R    G 
Sbjct: 453 IIDEAAQA------------------VGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGF 494

Query: 675 RPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPD--RPMFFYVT 732
               L++QYRMHPE+S FPS  FYEG L++G    ++R      PW       P  F+  
Sbjct: 495 PVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSKKR------PWHSYSCFGPFCFFDV 548

Query: 733 QGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVR-PE-----QIGIITPYEGQRSYLVQ 786
            G E       S++N  E   VE +T  + +  +R PE     Q+ +I+PY  Q   L  
Sbjct: 549 DGTESQPSGSGSWVNEDE---VEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKD 605

Query: 787 HMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTR 846
           H  ++ +   +  + I+V +VD FQG EK+++I SCVR N+ Q IGF+SD RR+NVA+TR
Sbjct: 606 H--FRSTFGDQSKEVIDVNTVDGFQGCEKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITR 663

Query: 847 AKYGLIVVGNPKVLSKQPLWNHLLAFYKER 876
           A+  ++VVG+   L +   WN+L+   KER
Sbjct: 664 ARSAVLVVGSASTLKEDKHWNNLVESAKER 693


>04_04_0915 -
           29385926-29385952,29386069-29386285,29386367-29386622,
           29386745-29387072,29387157-29387587,29388014-29388163,
           29388212-29388398,29388709-29388750,29389007-29389555,
           29389778-29390032
          Length = 813

 Score =  152 bits (369), Expect = 1e-36
 Identities = 94/270 (34%), Positives = 143/270 (52%), Gaps = 11/270 (4%)

Query: 614 ILIDEGMQSTEPECMVPVVL-GARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 672
           +++DE  Q  E E ++P+ L G +Q + +GD CQL  +V  K +  A   +S+FERL  L
Sbjct: 497 LVVDEAAQLKECETLIPMQLPGIKQAVFIGDECQLPALVKSKISDNADFGRSVFERLSSL 556

Query: 673 GIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRPMFFYVT 732
           G     L +QYRM PE+S+FP   FY+G + +G +   +   +   P        F  V 
Sbjct: 557 GYNKHLLNIQYRMRPEISKFPVASFYDGKISDGPNVVSKNYKRNILPGKMFGPYSFINVD 616

Query: 733 QGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGV---RPEQIGIITPYEGQRSYLVQHMQ 789
            G E     G S  N  E A V  +  R  +  V       +G+++PY  Q    V+ +Q
Sbjct: 617 GGHETTEKHGRSLKNTIEVAAVLWIVRRLFEESVFLGSKLTVGVVSPYNAQ----VRAIQ 672

Query: 790 YQGSLHAKLYQE--IEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTRA 847
            +      +Y +  ++V SVD FQG E+D+II+S VRSN    +GFL++ +R N+ALTRA
Sbjct: 673 EKIGKTYDMYDDFSVKVKSVDGFQGAEEDVIIISTVRSNRAGSVGFLTNLQRTNMALTRA 732

Query: 848 KYGLIVVGNPKVLS-KQPLWNHLLAFYKER 876
           K+ L +VGN   LS  + +W  ++   K R
Sbjct: 733 KHCLWIVGNGTTLSNSRSVWQKVVNDAKHR 762


>02_05_0329 -
           27986261-27987372,27988632-27988638,27988999-27989128,
           27989157-27989216,27989318-27989970,27990056-27990526
          Length = 810

 Score =  133 bits (322), Expect = 6e-31
 Identities = 93/278 (33%), Positives = 132/278 (47%), Gaps = 29/278 (10%)

Query: 611 FQSILIDEGMQSTEPECMVPVVL-GARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 669
           F  +++DE  Q  E E ++P+ L G R  +L+G   QL  +V  +    A   +SLFERL
Sbjct: 113 FDLLVVDEAAQLKECESLIPLQLPGVRHAVLIGYEFQLPALVKSRVCEDAEFGRSLFERL 172

Query: 670 VVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRPMFF 729
             LG     L+VQYRMHP +S+FP   FYE  + +G +   R   +     P      F 
Sbjct: 173 SSLGHPKHLLDVQYRMHPGISKFPVSSFYENKISDGENVLHRDYERKPLAGPMYGSYSFI 232

Query: 730 YVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAG--VRPEQIG--------------- 772
            V  G+E       S +N  E A V ++  R  K    + P   G               
Sbjct: 233 NVDAGKESKGKHDKSLMNPIEVAAVTRIVQRLFKGTHCIMPLHSGMASLSSDSLVCAESV 292

Query: 773 ---------IITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCV 823
                    +++PY+GQ   + + +      H      ++V SVD FQG E+DIII S V
Sbjct: 293 DTGRKLCVGVVSPYKGQVRAIQERLGKAYETHGGF--TVKVRSVDGFQGAEEDIIIFSAV 350

Query: 824 RSNEHQGIGFLSDPRRLNVALTRAKYGLIVVGNPKVLS 861
           RSN    +GFLS+  R NVALTRAK+ L ++GN   L+
Sbjct: 351 RSNTTGSVGFLSNVNRTNVALTRAKHCLWILGNANTLA 388


>04_04_0959 + 29692740-29693035,29693102-29693267,29693433-29693612,
            29693703-29693771,29693888-29694088,29694187-29694240,
            29694325-29694386,29694488-29694620,29694789-29694899,
            29695008-29695104,29695638-29695714,29696129-29696194,
            29696431-29696583,29697392-29697447,29697524-29697584,
            29697656-29697766,29698010-29698144,29698217-29698447,
            29699001-29699075,29699161-29699282,29699381-29699453,
            29699538-29699642,29699728-29699895,29700079-29700148,
            29700224-29700375,29700574-29700651,29700744-29700836,
            29700961-29701098,29701237-29701276,29701350-29701423,
            29701777-29701911,29702345-29702464,29702778-29702939
          Length = 1287

 Score =  132 bits (320), Expect = 1e-30
 Identities = 101/298 (33%), Positives = 142/298 (47%), Gaps = 25/298 (8%)

Query: 593  VICTTCVGAGDPRVARMRFQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVM 652
            V+  TC+G   P +A  +F + ++DE  Q T P  + P++L A + +LVGDH QL P+V 
Sbjct: 976  VVGVTCLGIYHPLLAHKKFDTCIMDEAGQITLPVSLGPLML-ATKFVLVGDHYQLPPLVQ 1034

Query: 653  CKKAAKAGLSQSLFERLVVLGIRPFR-LEVQYRMHPELSRFPSDFFYEGSLQNGVSAEER 711
              +A + G+  SLF RL     +    L  QYRM   +    +   Y   L  G      
Sbjct: 1035 SSEARENGMGVSLFWRLSEAHPQAISALRCQYRMSSGIMELSNSLIYGNRLSCGSLEIAN 1094

Query: 712  RLHKIDFPWP---------RPDRPMFFYVTQGQEEI-AGSGTSYLNRTEAANVEKLTTRF 761
               K+    P          PDR + F  T       A    +  N TEA  V  +T   
Sbjct: 1095 AKLKLSGRGPVRLKLKEILNPDRAVVFANTDEVPAFEAKEHRTVNNPTEALIVSWITNEL 1154

Query: 762  LKAGVRPEQIGIITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMS 821
            LK GV  + +GIITPY  Q + + QH+             +EV ++D +QGR+K+ II+S
Sbjct: 1155 LKRGVAQDGVGIITPYNAQANLIQQHVD----------ASVEVHTIDKYQGRDKECIIVS 1204

Query: 822  CVRSNEH---QGIGFLSDPRRLNVALTRAKYGLIVVGNPKVLSKQPLWNHLLAFYKER 876
             VRSN +    G   L D  R+NV LTRAK  LI+VG+   LS  PL   ++    ER
Sbjct: 1205 FVRSNGNTRASGSSLLGDWHRINVVLTRAKKKLIMVGSAATLSTIPLLRLMIEKVAER 1262



 Score = 45.6 bits (103), Expect = 2e-04
 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)

Query: 447 NLPDLNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPSNT 505
           +LP+LN  Q  ++   L  +  +LI G PGTGKT T    V  L+   G  +L+ + +N+
Sbjct: 864 SLPNLNNDQQRSLHKILAAKDYALILGMPGTGKTYTMVHAVKSLL-MRGESILLTSYTNS 922

Query: 506 AVDQLTEKIHRTGLKVVRL 524
           A+D L  K+   G+  +R+
Sbjct: 923 AIDNLLMKLKAEGVDFLRI 941


>04_04_1035 +
           30283456-30283536,30284823-30285359,30285508-30286512,
           30286718-30287042,30287563-30287818,30287901-30288117,
           30288743-30289095,30289330-30289833,30291267-30292467,
           30292614-30292970,30293258-30293495,30294083-30295125,
           30295234-30296649,30296731-30296855,30297036-30297314,
           30297352-30297382,30298957-30299022,30299447-30299689,
           30299848-30299898,30299980-30300071,30300182-30300249,
           30300515-30300600,30300720-30300824,30300994-30301127,
           30302403-30302436,30302620-30302892,30303019-30303288,
           30303384-30303974,30304065-30304214
          Length = 3376

 Score =  128 bits (309), Expect = 2e-29
 Identities = 91/249 (36%), Positives = 130/249 (52%), Gaps = 15/249 (6%)

Query: 644 HCQLGP--VVMCKKAAK----AGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFF 697
           H ++ P  V++  +AA+    AG   SLFERLVVL      L +QYRM P +S FP+  F
Sbjct: 525 HMEIAPLDVLIVDEAAQVCKEAGFGISLFERLVVLDFEKHLLNIQYRMDPRISLFPNVQF 584

Query: 698 YEGSLQNGVSAEERRLHKIDFPWPRPDRPMFFYVTQGQEEIAGSGTSYLNRTEAANVEKL 757
           Y   + +G +      +K D+         F  ++ G+EE  G+G S+ N  E A V  L
Sbjct: 585 YGRKILDGPNVMSSVYNK-DYTNLPFGTYAFINISDGREEKEGTGNSWRNLVEVAVVLHL 643

Query: 758 TTRFLKAGVRPEQ---IGIITPYEGQRSYLVQHMQYQGSLHAKLYQ-EIEVASVDAFQGR 813
                K   R  Q   IG+I+PY  Q   +   +   G L+       + V SVD FQG 
Sbjct: 644 IQTIFKTWKRKGQMLSIGVISPYSSQVDSIESRL---GKLYDTCDGFHVRVKSVDGFQGE 700

Query: 814 EKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTRAKYGLIVVGNPKVL-SKQPLWNHLLAF 872
           E DIII+S VRSN    +GFL+D +R NVALTRA++ L ++GN   L S   +W  L+A 
Sbjct: 701 EDDIIILSTVRSNVKGIVGFLADEQRTNVALTRARHCLWILGNANTLYSSGTVWKDLIAD 760

Query: 873 YKERRVLTE 881
            + R+ + +
Sbjct: 761 AQRRKCIID 769



 Score = 39.1 bits (87), Expect = 0.018
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 8/65 (12%)

Query: 450 DLNRSQVYAVKHALQRP-------LSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAP 502
           +LN+SQV A++  +          + LI GPPGTGKT T + +++ L        L CAP
Sbjct: 222 NLNQSQVDAIESVISAVQCRHLNLMKLIWGPPGTGKTKTVSALLWALACLK-CRTLTCAP 280

Query: 503 SNTAV 507
           +N A+
Sbjct: 281 TNVAI 285


>11_06_0561 -
           24984960-24985205,24985283-24985354,24985906-24985977,
           24986612-24986782,24987464-24987653,24987733-24987976,
           24988162-24988474,24988687-24989517,24989628-24989672,
           24989677-24989790,24989877-24990371,24990627-24990824,
           24990902-24991357
          Length = 1148

 Score =  109 bits (263), Expect = 9e-24
 Identities = 71/283 (25%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 593 VICTTCVGAGDPRVARMRFQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVM 652
           +ICT    +    +       +L+D+  Q  E + ++P+    R +++ GDH  L P+V 
Sbjct: 652 IICTPVCSSQLRELKLDTIDILLVDDAAQIKEIDMLIPLSFSPRHIVMFGDHLHLQPMVK 711

Query: 653 CKKAAKAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERR 712
            +   +AG + SLF+RL+       RL  QY M P +S+F S+ FYEG L++  + +   
Sbjct: 712 SEVCKEAGYASSLFQRLMHSSSENKRLTKQYMMDPSISQFVSENFYEGRLKDDSTVKSDD 771

Query: 713 LHKIDFPWPRPDRPMFFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQIG 772
            +K+   +P P     F+   G +E+ G G  ++  +    + +   +     +    +G
Sbjct: 772 YNKLLKEFPVP--AYGFFDISGVDELTGKGKGFVESSVIMFLLQFLCKGRTNAIGKINVG 829

Query: 773 IITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIG 832
           II  Y  +   L   +  +   H ++   IEV S+     +  D++I+S V   + +   
Sbjct: 830 IICLYNNRMDALRNLLGIKYENHDRI--NIEVNSLGNLHEKWYDVVILSSVSDEKAE--- 884

Query: 833 FLSDPRRLNVALTRAKYGLIVVGNPK-VLSKQPLWNHLLAFYK 874
            L +  ++NVA +R++Y L ++G  K +++ + LW  L+ + K
Sbjct: 885 -LLEGSKMNVAFSRSRYCLWIIGEGKNLIASEDLWKKLIGYAK 926


>04_04_0917 -
           29404341-29404519,29404610-29404744,29404898-29405225,
           29405313-29405532,29405653-29406647,29407233-29407493,
           29407534-29407872,29409309-29409497
          Length = 881

 Score =  102 bits (244), Expect = 2e-21
 Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 6/174 (3%)

Query: 612 QSILIDEGMQSTEPECMVPVVL-GARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLV 670
           + +++DE  Q  E E ++P+ L G  Q +L+GD  QL  +V  K A  A   +S+FERL 
Sbjct: 625 EMLIVDEAAQLKECETLIPLQLPGITQAVLIGDEYQLPALVKSKIADNAFFGRSVFERLS 684

Query: 671 VLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRP-MFF 729
           +LG     L VQYRMHPE+SRFP   FY+G + +G +   +   +  F   +   P  F 
Sbjct: 685 LLGYSKHLLNVQYRMHPEISRFPVATFYDGKISDGSNVTSKNYER-KFLASKIFGPYSFI 743

Query: 730 YVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPE---QIGIITPYEGQ 780
            V  G E    +G S  N  E A V ++  R  K  V  +    +G+++PY  Q
Sbjct: 744 NVDGGHETAEKNGRSLKNTIEVATVLRIVQRLFKEAVSTQSKLSVGVVSPYNAQ 797



 Score = 49.6 bits (113), Expect = 1e-05
 Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 11/93 (11%)

Query: 450 DLNRSQVYAVKHALQ------RPLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPS 503
           +LN SQ+ AV   +         L LI GPPGTGKT T +TI++ ++ + G   L CAP+
Sbjct: 290 NLNASQLNAVADCVSVMENQLSSLKLIWGPPGTGKTKTISTILWAMLIK-GRKTLTCAPT 348

Query: 504 NTAVDQLTEKIHRTGLKVVRLCAKSREAMESSV 536
           NT++ ++  +I    +++VR C+       S +
Sbjct: 349 NTSILEVASRI----VRLVRGCSDGSACFLSDI 377


>11_06_0557 -
           24955837-24956214,24957225-24957395,24957576-24957635,
           24958419-24958623,24958710-24958953,24959103-24959394,
           24959734-24960828,24960915-24961409,24961665-24961823,
           24961893-24962387
          Length = 1197

 Score = 94.7 bits (225), Expect = 3e-19
 Identities = 69/259 (26%), Positives = 128/259 (49%), Gaps = 18/259 (6%)

Query: 614 ILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 673
           +++D+  Q  E + +VP+ +  R ++L+GDH  L P+V  +   +AG ++SLF+RL+ L 
Sbjct: 708 LIVDKAAQIKENDLLVPLSIPPRHVVLLGDHQHLQPIVKTEGCKEAGCTRSLFQRLLHLS 767

Query: 674 IRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRPMFFYVTQ 733
               +L  QY MHP + +FPS+ FY+  + +G S E   L    FP         F+   
Sbjct: 768 FTRHKLIKQYMMHPLIRQFPSEHFYKDKIVDGQSVESINL---QFP------AYTFFDVV 818

Query: 734 GQEEIAGSGTSYLNRTEAA-NVEKLTTRFLKAGVRPEQIGIITPYEGQRSYLVQHMQYQG 792
             E+ +  G   +        ++KL      A  R   +GI+     Q + ++  +  + 
Sbjct: 819 DMEDFSCMGKKSMEAAVVLFLLQKLCEGLTNAAGR-LNVGIVCFCSNQVNAIITQLGRKY 877

Query: 793 SLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTRAKYGLI 852
             H ++   +EV S++       D+II+S +  ++ +    L    R+NVALT++++ L 
Sbjct: 878 QNHDRV--NLEVNSLENMHEDWYDVIILSSLFDDKSE----LPTDNRINVALTKSRHCLW 931

Query: 853 VVGNPKVLSKQP-LWNHLL 870
           ++G   +L + P  W  L+
Sbjct: 932 IIGQADILLQIPGTWKSLI 950


>03_03_0186 + 15243150-15243563,15243685-15243777,15244604-15244666,
            15245028-15245114,15245197-15245349,15245422-15245579,
            15246458-15246692,15246782-15246892,15246942-15246968,
            15247269-15248327,15248432-15248692,15249011-15249196,
            15249642-15250793,15250886-15251236,15251343-15251738
          Length = 1581

 Score = 90.6 bits (215), Expect = 6e-18
 Identities = 80/258 (31%), Positives = 126/258 (48%), Gaps = 24/258 (9%)

Query: 610  RFQSILIDEGMQSTEPECMVPVVLGARQ--------LILVGDHCQLGPVVMCKKAAK-AG 660
            ++ ++L++E  Q  E E  +P++L  ++         IL+GDH QL PVV      K + 
Sbjct: 1133 KYDNLLMEESAQILEIETFIPMLLQRQEDGYARLKRCILIGDHHQLPPVVKNMAFQKYSH 1192

Query: 661  LSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFFYE-GSLQNGVSAEERRLHKID-- 717
            + QSLF R V LG+    L  Q R  P ++   +  + E G L      EE   HK +  
Sbjct: 1193 MDQSLFTRFVRLGVPYIELNAQGRARPSIAELYNWRYRELGDLP--YVREEAIFHKANSG 1250

Query: 718  --FPWPRPDRPMFFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQIGIIT 775
              + +   D P F    +G+ E A S   Y N  EA  +  +       G    +I I+T
Sbjct: 1251 FSYDYQLVDVPDF----RGRGESAPSPWFYQNEGEAEFIVSVYIYMRLIGYPANKISILT 1306

Query: 776  PYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLS 835
             Y GQ+  L++ +  +      +    +V +VD FQG++ D I++S VR+   + +G L 
Sbjct: 1307 TYNGQK-LLIRDVINRRCKPWNIEPPSKVTTVDKFQGQQNDFILLSLVRT---RFVGHLR 1362

Query: 836  DPRRLNVALTRAKYGLIV 853
            D RRL VA++RA+ GL V
Sbjct: 1363 DVRRLIVAMSRARLGLYV 1380



 Score = 40.7 bits (91), Expect = 0.006
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 454 SQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVRQ-NGGPVLVCAPSNTAVDQLTE 512
           +Q+ A+   +Q  L+++ GPPGTGKT T+  I+  L         L+   SN A++ L E
Sbjct: 886 TQIGAIISGIQPGLTMVVGPPGTGKTDTAVQILNVLYHNCPSQRTLIITHSNQALNDLFE 945

Query: 513 KI 514
           KI
Sbjct: 946 KI 947


>04_04_0918 -
           29411239-29411373,29412276-29412526,29412772-29413009,
           29413133-29414251,29414540-29415106
          Length = 769

 Score = 80.6 bits (190), Expect = 6e-15
 Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 1/123 (0%)

Query: 598 CVGAGDPRVARMRFQSILIDEGMQSTEPECMVPVVLGA-RQLILVGDHCQLGPVVMCKKA 656
           C  +   +++  + Q +++DE  Q  E E ++P+ L   +  IL+GD CQL   V  K  
Sbjct: 505 CTVSSSSKISNKKLQLLVVDEAAQLKECEGLIPLRLPTLKHAILIGDECQLPATVKSKVC 564

Query: 657 AKAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKI 716
             A   +SLFERL  LG     L +QYRMHP +S FP+  FY+  L +  + +++   K 
Sbjct: 565 EDASFGRSLFERLSSLGHEKHLLNMQYRMHPSISIFPNISFYDRKLLDAPNVKQKEHRKK 624

Query: 717 DFP 719
             P
Sbjct: 625 YLP 627



 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 10/90 (11%)

Query: 468 SLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPSNTAVDQ--------LTEKIHRTGL 519
           SLI GPPGTGKT T + +++ L+R+     L CAP+N AV Q        + E   R  L
Sbjct: 242 SLIWGPPGTGKTKTISVLLW-LMREMDHGTLTCAPTNLAVKQVASRFLKVIKESSDRACL 300

Query: 520 KVVRLCA-KSREAMESSVSFLALHEQARAL 548
             V LC  K R  ++ ++  + LH++ R L
Sbjct: 301 GDVLLCGNKQRMCVDGNLKEIYLHDRVRTL 330



 Score = 41.5 bits (93), Expect = 0.003
 Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%)

Query: 771 IGIITPYEGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQG 830
           +G+I PY  Q   + Q +   G +       +++ S D FQG E+DII +S VRSN    
Sbjct: 652 VGVICPYTAQVLAIQQKL---GKMKFDPVI-VKINSGDGFQGGEEDIITLSTVRSNSDGA 707

Query: 831 IGFLSDP 837
           +GFL  P
Sbjct: 708 VGFLVKP 714


>11_06_0562 +
           25003246-25003746,25004975-25005214,25005576-25006097,
           25006184-25007248,25007350-25007656,25007761-25008001,
           25008104-25008302,25008771-25008852,25008959-25009209,
           25010061-25010219,25010220-25010603
          Length = 1316

 Score = 74.5 bits (175), Expect = 4e-13
 Identities = 59/244 (24%), Positives = 114/244 (46%), Gaps = 20/244 (8%)

Query: 615 LIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGI 674
           ++D+  +  E + ++P+ L    ++++GD   L P    K    A  S + F+RL+ LG 
Sbjct: 740 IVDDAAKINECDLIIPLRLPVTHILMLGDDFNLQP---SKVWENARFSMNPFKRLLNLGF 796

Query: 675 RPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRPMFFYVTQG 734
           R   L  QY +HP + +FP++ FYEG + NG +      +K  F   +     F  VT  
Sbjct: 797 RKHMLTEQYAIHPSIWQFPNEKFYEGRITNGATVVSPEYNK-QFKGLKFPNYCFIDVT-- 853

Query: 735 QEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQ---IGIITPYEGQRSYLVQHMQYQ 791
                  G S  N  E A ++ +  + +  G+   +   +G++         +   +  +
Sbjct: 854 ----GTDGPSCKNTIELATIQYM-LKIISQGLEDTEVIDVGVLCLCGSYVGGIKSSLGKK 908

Query: 792 GSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTRAKYGL 851
            + H K+   + + S D+F+G    ++I+S +  +E+     +    ++N ALTRA++ L
Sbjct: 909 YATHNKI--NVHIESADSFEGETYHLVILSMLFKDENT----ILQIEKINAALTRARHCL 962

Query: 852 IVVG 855
            + G
Sbjct: 963 WMFG 966



 Score = 41.9 bits (94), Expect = 0.003
 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 8/71 (11%)

Query: 448 LPDLNRSQVYAVKHALQ-------RPLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVC 500
           L  LN+ Q+Y++K  +        + + LIQGPPG+GKT  +  ++ Q++      VL+C
Sbjct: 440 LSHLNQQQLYSLKSIISAVHCRSNKHIELIQGPPGSGKTEITIALL-QVLHHMNLKVLLC 498

Query: 501 APSNTAVDQLT 511
           AP    V  LT
Sbjct: 499 APKTNIVKFLT 509


>01_05_0201 -
           19225597-19225890,19227832-19228030,19228133-19228321,
           19228475-19228785,19228899-19229030
          Length = 374

 Score = 57.6 bits (133), Expect = 5e-08
 Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 3/94 (3%)

Query: 614 ILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 673
           +++D+  +  E + ++P+ L    ++++GD   L P    K    A  + S F+RL+ LG
Sbjct: 7   LIVDDAAKINECDLIIPLRLLVTHILMLGDDFNLQP---SKVRENARFTMSPFKRLLNLG 63

Query: 674 IRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVS 707
            R   L  QY +HP + +F ++ FYEG + NG +
Sbjct: 64  FRKHMLTEQYAIHPSIWQFRNEKFYEGRITNGAT 97


>02_05_0330 - 27996080-27996757,27996836-27997366,27998124-27998303
          Length = 462

 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 10/86 (11%)

Query: 437 VHLPKHFSAPNLPD--LNRSQVYAVKHAL----QRPLS--LIQGPPGTGKTVTSATIVYQ 488
           +HLP   +   L D  LN+SQ  AV   +    QR  S  LI GPPGTGKT T +T+++ 
Sbjct: 250 LHLPDR-ALGGLEDFKLNKSQKVAVLDCVSAMQQRSSSVRLIWGPPGTGKTKTISTLLWA 308

Query: 489 LVRQNGGPVLVCAPSNTAVDQLTEKI 514
           ++ +N    L CAP+NTAV ++  ++
Sbjct: 309 MLVKN-HRTLTCAPTNTAVVEVASRV 333


>12_01_0489 +
           3872495-3872538,3872663-3872741,3872835-3872914,
           3873888-3874007,3874090-3874159,3874238-3874311,
           3874393-3874513,3874600-3874662,3874748-3874807,
           3875156-3875281,3875358-3875441,3875912-3876010
          Length = 339

 Score = 35.5 bits (78), Expect = 0.22
 Identities = 15/24 (62%), Positives = 16/24 (66%)

Query: 466 PLSLIQGPPGTGKTVTSATIVYQL 489
           P  L  GPPGTGKT T+  I YQL
Sbjct: 43  PHMLFYGPPGTGKTTTALAIAYQL 66


>05_03_0045 +
           7752571-7752599,7754013-7754078,7754228-7754228,
           7757535-7758380
          Length = 313

 Score = 35.1 bits (77), Expect = 0.29
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)

Query: 882 GPLSNLKESAIQFAKPKKLVNSQNPGSHFMSTSMFDAREAMVPGSIYDRAR-PPRDPLAY 940
           G L N+  + I+F     +   QN G  F+   +F     +V G+ +     PP  P A 
Sbjct: 192 GVLVNILTNMIKFVVDGMIAKHQNTGPVFLPGGVFPPYRNLVTGNQHHTTNTPPVQPTAV 251

Query: 941 VGPERGALLHAPVPPAA 957
           V P     + APV P++
Sbjct: 252 VQPTAVVSVPAPVAPSS 268


>11_01_0515 +
           4003167-4003229,4003318-4003738,4004224-4004367,
           4004474-4004556,4004661-4004775,4005309-4005400,
           4005558-4005612,4005689-4005834,4005888-4006001,
           4006149-4006342,4006985-4007112,4008526-4008583,
           4009800-4009876,4010214-4010263,4010336-4010515,
           4010633-4010731,4010816-4011133,4011221-4011281,
           4011693-4012781,4012951-4013005,4013133-4013291,
           4013923-4014442
          Length = 1406

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 468 SLIQGPPGTGKTVTSATIVYQLVRQ-NGGPVLVCAPSNTAVDQLTEKIHRT 517
           +L+  P G GKT  +A ++Y   R    G ++  AP+   V Q  E  H T
Sbjct: 182 TLVALPTGLGKTFIAAVVMYNYFRWFPEGKIVFTAPTRPLVTQQIEACHNT 232


>12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045
          Length = 1294

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%)

Query: 467 LSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPSNTAVDQLTEKI--HRTGLKVVRL 524
           LSLI G  G GKT  +  +  ++VR+N   + VC      V  +T KI    TG K    
Sbjct: 242 LSLI-GHGGMGKTTLAQRVCEEMVRKNFKVIWVCVSDRFDVTSVTSKILESATGAKPNAN 300

Query: 525 CAKS 528
           C ++
Sbjct: 301 CLET 304


>09_04_0093 - 14550806-14552452
          Length = 548

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 7/70 (10%)

Query: 179 AKADSVVVLLCRQPCAAQSSLKDMNW-----DQE--QWKPLISDRAFLSWLVKVPSETEQ 231
           AK D+V ++     CA Q  L+   W     +QE  QW+ ++ D A ++  VK  +  + 
Sbjct: 288 AKVDAVTMVALLTACAEQGDLRLGRWVHAHVEQEGRQWRTVLLDNALINMYVKCGAVEDA 347

Query: 232 MRARQVTPQQ 241
            R   V P++
Sbjct: 348 HRLFLVMPRR 357


  Database: rice
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.319    0.135    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,408,990
Number of Sequences: 37544
Number of extensions: 1243527
Number of successful extensions: 2815
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2703
Number of HSP's gapped (non-prelim): 56
length of query: 1032
length of database: 14,793,348
effective HSP length: 89
effective length of query: 943
effective length of database: 11,451,932
effective search space: 10799171876
effective search space used: 10799171876
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)

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