Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001539-TA|BGIBMGA001539-PA|undefined
(338 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171... 36 0.047
12_02_1268 + 27458823-27460046 33 0.33
08_02_1297 + 25963817-25964047 31 1.0
05_04_0132 + 18303925-18307164 31 1.0
01_07_0374 + 43144861-43144998,43145695-43145794,43146499-431466... 31 1.0
04_04_0544 + 26127060-26127331,26128279-26128373,26129436-261295... 31 1.3
08_02_0750 + 20786096-20786475,20786689-20786822,20786906-20787057 30 2.3
07_01_0040 + 325737-328181 30 2.3
03_05_0866 - 28370034-28371352,28371447-28371995,28372507-28373512 30 3.1
01_01_0400 + 3038298-3038863,3039057-3039411,3039504-3040232 30 3.1
05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,300... 29 4.0
05_01_0002 - 8097-8246,8384-8495,8572-8735,9367-9519,9603-9732,9... 29 4.0
07_03_0337 + 16918613-16919078,16921610-16921725,16922039-169222... 29 5.3
05_07_0116 - 27785083-27786123,27786201-27786278,27786364-277869... 29 5.3
02_05_0752 + 31491462-31491921,31492177-31492271,31492346-314925... 29 5.3
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 7.1
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 7.1
06_02_0217 + 13170731-13170826,13170886-13171203 29 7.1
06_01_0452 + 3198475-3198962,3199062-3199191,3199332-3199497,319... 29 7.1
03_02_1022 + 13260647-13260834,13260965-13261070,13262052-132621... 29 7.1
02_03_0360 + 18104948-18106159 29 7.1
09_04_0512 + 18226981-18227143,18227648-18229555,18229649-182302... 28 9.3
09_01_0019 + 403078-404211 28 9.3
04_04_0808 - 28196563-28196735,28197369-28197440,28197540-281976... 28 9.3
04_04_0063 - 22441549-22442961 28 9.3
04_01_0305 - 4141692-4142912 28 9.3
01_06_0847 + 32411521-32411619,32411737-32411851,32412292-324123... 28 9.3
>11_01_0219 -
1710206-1710246,1710479-1710620,1710699-1710752,
1710838-1710909,1711631-1711699,1711807-1711848,
1711946-1712014,1712130-1712267,1712390-1712500,
1712576-1712726,1713720-1713775,1714076-1714753
Length = 540
Score = 35.9 bits (79), Expect = 0.047
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 5/125 (4%)
Query: 73 TEAQWAQWKQKDEEMVDGNFESELHQAILLSKLDYEE--KKDVYKQLKKDVDAANKVAEV 130
TE++ A ++K EE DG + EL + L +D EE +++ ++L + +A N+V +
Sbjct: 110 TESKSADAEEKSEEEEDGEGDEELEE---LDDVDDEEESEEEEKEELGLEGEAGNEVEDE 166
Query: 131 SRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDDKIPEKDTQFFERVK 190
+K L K V E G K + E++ +S D++ + E + E +
Sbjct: 167 FFKIKDLDKFMVKGEEAEYGGGAKQGKKKKKTENWMEEDSDSEDEEYLDEDEEDDDEHLD 226
Query: 191 IETKD 195
+E D
Sbjct: 227 LEDFD 231
>12_02_1268 + 27458823-27460046
Length = 407
Score = 33.1 bits (72), Expect = 0.33
Identities = 19/89 (21%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 109 EKKDVYKQLKKDVDAAN-KVAEVSRNVK-KLKKKNV-MCLEQFNGIVNSTENSDVKFNHN 165
E+ +++ ++++ ++ A+ A+V+ N+ + K K+V CLE+ ++ + + ++
Sbjct: 307 EQHEMFGEIRQLLEEADMSPADVAENLMPRSKTKDVDACLERLVKALHEAKETKAAGGND 366
Query: 166 TEDEKNSTDDDKIPEKDTQFFERVKIETK 194
+DE +S+ DD D++ +++ + TK
Sbjct: 367 DDDESSSSSDDSDSSSDSEEQDKLAVVTK 395
>08_02_1297 + 25963817-25964047
Length = 76
Score = 31.5 bits (68), Expect = 1.0
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 257 SILGQGEMRDKAEVLVEVERLNSVQAELTAEIATLHSELEKERSKNTD 304
SI E + + LVE+ER + + AE+ + + E+ER KN D
Sbjct: 17 SIQANDEEQQRRRRLVELERRGEEREKQVAEMVSREEDRERERKKNLD 64
>05_04_0132 + 18303925-18307164
Length = 1079
Score = 31.5 bits (68), Expect = 1.0
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 82 QKDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKN 141
++ E + + N HQ + + + +E+K+ K + ++AE + N+ K
Sbjct: 412 EEQERVSEDNILDAAHQTEVCREQEMQEEKNFAAVCKLGIPE-QELAETADNIPDECCKE 470
Query: 142 VMCLEQFNG----IVNSTENSDVKFNHNTEDEKNSTDD 175
+EQ G + S S+V + N EDE+N+ DD
Sbjct: 471 ETSMEQDEGGDGTNMESESISEVAEHPNVEDEENTQDD 508
>01_07_0374 +
43144861-43144998,43145695-43145794,43146499-43146651,
43147383-43150081
Length = 1029
Score = 31.5 bits (68), Expect = 1.0
Identities = 35/145 (24%), Positives = 72/145 (49%), Gaps = 12/145 (8%)
Query: 92 FESELHQAILLSKLDYEEKKDVYKQLKK--DVDAANKVAEVSRNVKKLKKKNV----MCL 145
FE E Q I L + E + V +++K+ + D + VAE++ ++ +L K V M
Sbjct: 400 FEMEEVQHIKLGEF---ETQTVLEKIKEHFERDGSISVAEITEHIDELVNKVVDLELMVS 456
Query: 146 EQFNGIVN-STENSDVKFNHNTEDEKNSTDDDKIPEKDTQFFER-VKIETKDALIRNKIK 203
Q + I ENS+++ + +E+N +D DK+ EK + E V+++ ++ +K +
Sbjct: 457 SQSSQIDRLCRENSELESCLQSLEEENVSDPDKVNEKLKKLEEELVRVQALESCF-HKDE 515
Query: 204 ERIHNRLTDEVITKIQFNETLEKKD 228
I + ++ + +E L+ +
Sbjct: 516 STIRSNFSEAISRLSGISEMLQSSE 540
>04_04_0544 +
26127060-26127331,26128279-26128373,26129436-26129545,
26129661-26129733,26130310-26130563
Length = 267
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 170 KNSTDDDKIPEKDTQFFERVKIETKDALIRNKIKERIHNRLTDEVITK 217
K+ D K+ +KD + ER++ E K + +++KER + LT ++I K
Sbjct: 115 KHGLGDTKLEQKDQKLLERLREERKAKI--DELKERTNYYLTQKLIQK 160
>08_02_0750 + 20786096-20786475,20786689-20786822,20786906-20787057
Length = 221
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 251 RNKKLCSILGQGE--MRDKAEVLVEVERLNSVQAELTAEIATLHSELEKERSKN 302
RN KL + L E +D ++ E +L S++ E+TA++ L ELE + S+N
Sbjct: 53 RNLKLEAELRSLEPLRQDALQLRSEAGKLQSIRQEMTAKVQGLLKELEHQNSEN 106
>07_01_0040 + 325737-328181
Length = 814
Score = 30.3 bits (65), Expect = 2.3
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 9/53 (16%)
Query: 253 KKLCSILGQGEMRDKAEVLVEVERLNSVQAELTAEIATLHSEL-EKERSKNTD 304
KKLC GQG +RD E+ + +Q ELT AT +EL +K+ S +T+
Sbjct: 541 KKLCGYRGQGTLRDDEEL------VRDIQMELTK--ATREAELNKKDNSSSTN 585
>03_05_0866 - 28370034-28371352,28371447-28371995,28372507-28373512
Length = 957
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 271 LVEVERLNSVQAELTAEIATLHSELEKERS 300
LV V++L S A ++TL++ELE ERS
Sbjct: 591 LVSVDQLKSALASAHKSLSTLYTELENERS 620
>01_01_0400 + 3038298-3038863,3039057-3039411,3039504-3040232
Length = 549
Score = 29.9 bits (64), Expect = 3.1
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 149 NGIVNSTENSDV--KFNHNTEDEKNSTDDDKIPEKDTQFFERVKIETKDALIRNKIKERI 206
+ +V TE + K N DEK S D + + E + K+ L + + KE
Sbjct: 374 DNVVPKTEEHETLEKENLMKGDEKGS--HDMMLDNVVAKIEEQETPEKENLTKGEEKES- 430
Query: 207 HNRLTDEVITKIQFNETLEKKD 228
H+ + D V+ KI+ ET EK++
Sbjct: 431 HDMMLDNVVAKIEEQETPEKEN 452
Score = 29.9 bits (64), Expect = 3.1
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 138 KKKNVMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTD---DDKIPEKDTQFFERVKIETK 194
K+ + M L+ + E + K N DEK S D D+ + + D Q + K
Sbjct: 428 KESHDMMLDNVVAKIEEQETPE-KENLTKGDEKESHDMMLDNVVAKIDEQ-----ETTEK 481
Query: 195 DALIRNKIKERIHNRLTDEVITKIQFNETLEKK 227
++L + KE H+ + D V+ KI+ ET EK+
Sbjct: 482 ESLTKGDEKES-HDMMLDNVVAKIEEQETPEKE 513
>05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,
3003571-3004442,3004592-3004773,3005206-3005295,
3005388-3005675,3005776-3005997,3006053-3006133,
3006634-3006861
Length = 1475
Score = 29.5 bits (63), Expect = 4.0
Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 6/132 (4%)
Query: 82 QKDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKN 141
++ + VD N + L+ ++ +LD K+ + D D N + +N KK
Sbjct: 1123 EQAQRTVDENQKLRLNLQSMMHELDANCKRLEELTAQADSDKRNLEVLMQKNAKKADHLR 1182
Query: 142 VMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDDKIPEKDTQFFERVKIETKDALIRNK 201
+ LEQ N + HN E E + ++ E Q + K+E + A ++ K
Sbjct: 1183 LAELEQQKADGNVLRLVE---EHNREKEATLNSNMRLHE---QLDRKQKLELEIAHLKGK 1236
Query: 202 IKERIHNRLTDE 213
++ H + T++
Sbjct: 1237 LQVTKHTQGTED 1248
>05_01_0002 - 8097-8246,8384-8495,8572-8735,9367-9519,9603-9732,
9802-9902,10016-10651,10820-10899,11014-11673,
11787-12041,12154-12281,12515-12669,12735-12919,
13020-13049,13164-13239,13371-13504,13703-13994,
14400-14567,14647-14745,14843-15014,15103-15281
Length = 1352
Score = 29.5 bits (63), Expect = 4.0
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Query: 118 KKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDDK 177
+ DVDA ++ E S + + + E +G + + +H ED+ + D D
Sbjct: 956 ENDVDADDE-GEESAQMMEDSENASEAGEDASGSESGDGEECSREDHEDEDDMDQDDPDA 1014
Query: 178 IPEKDTQFFERVKIETKDALIRNKIKERIHN 208
E + + E + + DA I ER HN
Sbjct: 1015 KAESEGEAAENTEAQDADAGISLPFSERSHN 1045
>07_03_0337 +
16918613-16919078,16921610-16921725,16922039-16922208,
16922509-16922602,16923371-16923457,16923529-16923609,
16923800-16923925,16924541-16924649,16924723-16924802,
16925401-16925529,16925605-16925705,16926075-16926208,
16926307-16926404,16926488-16926607,16927008-16927022,
16927930-16927957,16928066-16928118,16928446-16928517,
16928605-16928652,16928928-16929033,16929110-16929168,
16929792-16929887,16929942-16929959
Length = 801
Score = 29.1 bits (62), Expect = 5.3
Identities = 26/119 (21%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 110 KKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDE 169
+ ++ K LK+ V+ K EV + K+ +K LE N + + ++ V+ +
Sbjct: 100 ESELVKGLKEQVERLRK--EVEEH-KQTQKATEAALEHVN-VAYAEADAKVQDLTAKLTQ 155
Query: 170 KNSTDDDKIPEKDTQFFERVKIETKDALIRNKIKERIHNRLTDEVITKIQFNETLEKKD 228
D ++ E+D ++ V+++TK + + K+RI + ++ + +FNE +K +
Sbjct: 156 AQQKMDKELKERDEKY---VELDTKFQRLHKRAKQRIQDIQKEKDDMEARFNEINQKAE 211
>05_07_0116 -
27785083-27786123,27786201-27786278,27786364-27786976,
27787128-27787213,27787316-27787438,27787600-27787734,
27787930-27788019,27788796-27788981,27789560-27789661,
27789787-27789900,27790010-27790153,27790260-27790325,
27790895-27791056,27791668-27791916
Length = 1062
Score = 29.1 bits (62), Expect = 5.3
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 94 SELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVN 153
SE H+A L + YEE + +++ +D + ++AE+ KL+++ V +
Sbjct: 530 SEGHRAEYLRR--YEESINDKQKISRDY--SGRIAELQTKSSKLEERCVSLSSALDNAKR 585
Query: 154 STENSDVKFNHNTEDEKNSTDDDKIPEKDTQFFERVKI 191
+ + K++HN +K D+ K+ + RV I
Sbjct: 586 ESVDWKNKYDHNLLQQK--ADESKLKSQIASLESRVNI 621
>02_05_0752 +
31491462-31491921,31492177-31492271,31492346-31492573,
31493070-31493157,31493275-31493326,31493985-31494050,
31494382-31494536,31494633-31494703,31494820-31495017,
31495103-31495144,31496223-31496324,31496514-31496603,
31496708-31496783,31497299-31497395,31497488-31497557,
31497676-31497852,31498156-31498239,31498971-31499093,
31500143-31500226,31500318-31500502,31500592-31500730,
31500841-31500900,31500969-31501040,31501136-31501197,
31501839-31501945,31501984-31502058,31502800-31503248
Length = 1168
Score = 29.1 bits (62), Expect = 5.3
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 80 WKQKDEEMVDGNFESELHQAILLSK--LDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKL 137
+ + DEE D + ESE ++ + + D+ + D DA V E+ ++V +L
Sbjct: 191 YSESDEE--DEHDESEDEESDIEDEGDEDWTSNGEAKTDESDDEDALKSVEELKKSVDRL 248
Query: 138 KKKNVMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDDKIP 179
+K LE+F V E + + S+++DK P
Sbjct: 249 RKLVPCTLEEFAKRVAGAEEGTTS---ESSESPESSEEDKRP 287
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 110 KKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLE 146
K V K+ +AA K AEV R +KKLK+ V +E
Sbjct: 213 KNQVIALKSKEEEAAIKDAEVQRKLKKLKELEVEVVE 249
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 110 KKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLE 146
K V K+ +AA K AEV R +KKLK+ V +E
Sbjct: 518 KNQVIALKSKEEEAAIKDAEVQRKLKKLKELEVEVVE 554
>06_02_0217 + 13170731-13170826,13170886-13171203
Length = 137
Score = 28.7 bits (61), Expect = 7.1
Identities = 24/106 (22%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
Query: 96 LHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEV-SRNVKKLKKKNVMCLEQFNGIVNS 154
+H+ ++ + + +DV +QL++ + K ++ +R + + +N + + N I+ S
Sbjct: 36 IHKTQRVTITERKRIEDVARQLEEVLMKRIKKRKIETRQIVVEETRNEL---RINKIIKS 92
Query: 155 TENSDVKFNHNTEDEKNSTDD-DKIPEKDTQFFERVKIETKDALIR 199
E SD++ NT+DE+N ++ + ++ +R K E ++A++R
Sbjct: 93 -EESDIEIEVNTDDEENKAEEYEAWTNREIARTKRDK-EEREAMLR 136
>06_01_0452 +
3198475-3198962,3199062-3199191,3199332-3199497,
3199765-3199883,3200056-3200136,3200236-3200322,
3200644-3200715,3200791-3200859,3201349-3201426,
3201540-3201680,3202333-3202386,3202465-3202581
Length = 533
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 114 YKQLKKDVDAANKVAEVS---RNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDEK 170
Y++ K + N+V V RNV K+ + EQF G+V S KFN E+++
Sbjct: 210 YEEFVKAATSENEVQFVETNDRNVAKILFPGIASEEQFLGLVKSEPEKFEKFNGAFEEKE 269
>03_02_1022 +
13260647-13260834,13260965-13261070,13262052-13262169,
13262271-13262539
Length = 226
Score = 28.7 bits (61), Expect = 7.1
Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 5/123 (4%)
Query: 70 GESTEAQWAQWKQKDEEMVDGNFESE-LHQAILLSKLDYEEKKDV----YKQLKKDVDAA 124
G +EA+ Q MV + L L LD + KD +K+ KK A
Sbjct: 21 GSGSEAEDVVVGQMPTVMVPKHINKRALKNKALSVSLDKKALKDFVTGFHKRKKKRRKEA 80
Query: 125 NKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDDKIPEKDTQ 184
K+ + K+++++ E+ + +SD + E++ + + D +PE + +
Sbjct: 81 QKILQEKERKKRIEERKRRKQEKEIALYGRVLSSDNADGEDVENDGDEMETDDLPEPEVK 140
Query: 185 FFE 187
+E
Sbjct: 141 TYE 143
>02_03_0360 + 18104948-18106159
Length = 403
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 74 EAQWAQWK-QKDEEMV---DGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDA 123
EA+ AQ + +K+ EM+ D E + +L ++L +EEK V +QL+ +++A
Sbjct: 180 EAERAQEELEKEREMLRLADELREERVQMKLLEARLQFEEKNAVVEQLRDELEA 233
>09_04_0512 + 18226981-18227143,18227648-18229555,18229649-18230295,
18230710-18231949,18232085-18232419,18232500-18232577,
18232872-18232978,18233020-18233062
Length = 1506
Score = 28.3 bits (60), Expect = 9.3
Identities = 21/112 (18%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 71 ESTEAQWAQWKQKDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEV 130
E+ EA ++K E ++L + L + + ++K++ K+ K+D D A K +
Sbjct: 1330 EAAEAAKRLEEKKQNEREMRKAAAKLERERLKQEKELKQKQEEQKK-KRDADVAAKKRQR 1388
Query: 131 SRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDDKIPEKD 182
+K K++ C E+ + N + + ++D+ ++ + D
Sbjct: 1389 GEEERKEKQRKRKCTEEARKQQKQPTEKSLAVNDEKDVCRKTSDNIELTKPD 1440
>09_01_0019 + 403078-404211
Length = 377
Score = 28.3 bits (60), Expect = 9.3
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 117 LKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDD 176
++ D+DA + A + KL + ++ +G ++ E SD + + ED +S+D D
Sbjct: 133 MEDDIDAGIRAASQANAQAKLDEFR----KKTSGGKDADEGSDDEDEDDEEDSDDSSDSD 188
Query: 177 KIPEKDTQFFERVKIETKDALIRNKIKERIHNR 209
PE + ER + ++ R++ K+ +R
Sbjct: 189 IDPELERIIAERERAKSGRKHSRDEEKKTSRHR 221
>04_04_0808 -
28196563-28196735,28197369-28197440,28197540-28197666,
28198362-28198430,28198517-28198583,28198751-28198872,
28199302-28199412,28199596-28199661,28200156-28200213,
28200307-28200343,28200420-28200513,28200967-28201032,
28201139-28201203,28201352-28201496,28201925-28202074,
28202266-28202335,28202752-28202828,28202919-28202987,
28203798-28203881,28204018-28204061,28204172-28204273,
28204420-28204618,28204672-28204727,28204886-28204958,
28205685-28205771,28205863-28205976,28206985-28207092,
28207183-28207278,28207722-28207787,28208130-28208222,
28208429-28208512,28208961-28209078,28209191-28209267,
28209459-28209641,28210542-28210636,28210903-28211053,
28212218-28212325,28212513-28212612,28212788-28212840,
28214022-28214102
Length = 1269
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 142 VMCLEQFNGIVNSTENSDVKFNH-----NTEDEKNSTDDDKIPEKDTQFFERVKIETKDA 196
++C+ F ++ T S + F+H N ED+ +S+++ K+P+ Q E + A
Sbjct: 211 LLCIFLFGAFLHRTRRSGI-FSHTKPLKNAEDKIHSSNNGKVPDSSAQVSEAASAPVQSA 269
>04_04_0063 - 22441549-22442961
Length = 470
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 108 EEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLE 146
++ ++ ++L+K+ DAA KV + R V+K K+ LE
Sbjct: 3 QKVSEMEEELRKEKDAAEKVQLLQREVEKAKESERKMLE 41
>04_01_0305 - 4141692-4142912
Length = 406
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 259 LGQGEMRDKAEVLVEVERLNSVQAELTAEIATLHSELEKERSKNTDPRA 307
+ + +++DK E E+ L +AE+ A A+L SELE +KN + A
Sbjct: 217 VAEKQIKDKVE---ELRVLGVHKAEMDARAASLESELEAALAKNQELEA 262
>01_06_0847 +
32411521-32411619,32411737-32411851,32412292-32412375,
32412430-32413478,32414690-32416371,32416477-32416586,
32417634-32418430,32418839-32418951,32419147-32419194,
32419425-32419652,32419732-32419829,32419967-32420019
Length = 1491
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 261 QGEMRDKAEVLVEVERLNSVQAELTAEIATLHSELEKERSKN 302
Q ++ + V +EVER N+V + + + E EKERS+N
Sbjct: 305 QKKLNEDLRVRIEVERKNAVDQKNHIDHLSQKLEEEKERSEN 346
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.308 0.126 0.335
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,353,461
Number of Sequences: 37544
Number of extensions: 251067
Number of successful extensions: 941
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 930
Number of HSP's gapped (non-prelim): 34
length of query: 338
length of database: 14,793,348
effective HSP length: 82
effective length of query: 256
effective length of database: 11,714,740
effective search space: 2998973440
effective search space used: 2998973440
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 60 (28.3 bits)
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