Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001539-TA|BGIBMGA001539-PA|undefined
(338 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 35 0.014
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 34 0.033
SPBC31F10.05 |mug37||sequence orphan|Schizosaccharomyces pombe|c... 31 0.18
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 31 0.31
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 30 0.41
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 30 0.41
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 30 0.41
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 29 0.71
SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos... 29 0.71
SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificit... 29 1.2
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 29 1.2
SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase |Schizosa... 28 2.2
SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1 |Schizosa... 28 2.2
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 28 2.2
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 28 2.2
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 28 2.2
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 27 2.9
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 27 2.9
SPAC607.02c |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.9
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 27 3.8
SPAC823.04 |||rRNA processing protein, DUF947|Schizosaccharomyce... 27 3.8
SPBC800.08 |gcd10||translation initiation factor eIF-3 gamma sub... 27 5.0
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 27 5.0
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 27 5.0
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 27 5.0
SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6 |Schizosaccharo... 26 6.7
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 26 6.7
SPCC338.08 |ctp1|mug38|sequence orphan|Schizosaccharomyces pombe... 26 6.7
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 6.7
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 8.8
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces... 26 8.8
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 35.1 bits (77), Expect = 0.014
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 120 DVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDDKIP 179
D+++ + + + +K+++ K + LE NGI++ +S K + NT T
Sbjct: 125 DINSVTQKSNLLNELKQVRSK-LAALEHENGILSLQLSSSNKKDKNTSSVTTLTS----- 178
Query: 180 EKDTQFFERVKIETKDALIRNKIKERIHNRLTDEVITKIQFNETLEKKDXXXXXXXXXXX 239
E+D +F++ K+ ++ K E L+ +++T E L+KK+
Sbjct: 179 EEDVSYFQK-KLTNMESNFSAKQSEAYD--LSRQLLT---VTEKLDKKEKDYEKIKEDVS 232
Query: 240 XXXXXXXXXXSRNKKLCSILGQGEMRDKAEVLVE--VERLNSVQAELTAEIATLHSELEK 297
+ NK S+ G+ E +K V V L + L AE TL +LEK
Sbjct: 233 SIKASLAEEQASNK---SLRGEQERLEKLLVSSNKTVSTLRQTENSLRAECKTLQEKLEK 289
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 33.9 bits (74), Expect = 0.033
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 108 EEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTE 167
E K DV + + D + +S+ KK +KN I +TEN + + +T
Sbjct: 191 ETKNDVPEVSRPSTDTIGVSSALSKKKKKRNRKNQKKKSTKQNIEATTENDALSESISTP 250
Query: 168 D-EKNSTDDDKIPEKDT----QFFERVKIETKDALIRNKIKERIHN 208
D +K + +D E+DT + ER I D ++ KE +H+
Sbjct: 251 DIQKVAQSEDVDAEQDTVADSKEEERRDIANDDLIVNANAKEPMHH 296
>SPBC31F10.05 |mug37||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 217
Score = 31.5 bits (68), Expect = 0.18
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 105 LDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNH 164
+ + + + KQ K +D N V + RN K L+K+++ LE +NS EN K
Sbjct: 16 VQFIKSETTLKQKKTKIDVQN-VYGLDRNTKNLEKRDIQFLENDKLDLNSHENEGEKTKT 74
Query: 165 NT 166
T
Sbjct: 75 ET 76
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 30.7 bits (66), Expect = 0.31
Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 103 SKLDYEEKKDVYKQLKKDVDAANKVA---EVSRNVKKLKKKNVMCLEQFNGIVNSTENSD 159
S+ + EEK DV ++ K+ D NK + +V K+ ++ E V + E
Sbjct: 410 SEANLEEKSDVGEE-KESKDENNKASLHKDVEEKDTKITNEDTGKTETD---VKAKETDS 465
Query: 160 VKFNHNTEDEKNSTDDDKIPEKDTQFFERVKIETKDALIRNKIKERIHNRLTDEVITKIQ 219
++ N E + +DK+ E +++ + VK + D++ + +E+ ++ T + + +
Sbjct: 466 IEANDKDEKTDSKETEDKVEETESKEAD-VKAKETDSIEVDDKEEKTDSKETADKVEQTD 524
Query: 220 FNETLEK 226
+T EK
Sbjct: 525 SKDTNEK 531
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 30.3 bits (65), Expect = 0.41
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 86 EMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCL 145
E++D N +S Q +SK + E KK+V + V+++ ++ V +KLK + V+ +
Sbjct: 489 EVLDLNVKSSREQLQYVSKSNQEHKKEVEALQLQLVNSSTELESVKSENEKLKNELVLEI 548
Query: 146 EQ 147
E+
Sbjct: 549 EK 550
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 30.3 bits (65), Expect = 0.41
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 69 LGESTEAQWAQWKQKDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVA 128
L E EA+ + + K +E E Q LSK E++ ++L++ +++ +VA
Sbjct: 281 LAEVEEARKEEARLKKKEKERKKKEEMKAQGKYLSKKQKEQQALAQRRLQQMLESGVRVA 340
Query: 129 EVSRNVKKLK-------KKNVMCLEQFN--GIVNSTENSDVKFNHNTEDEKNSTDDDKIP 179
+S KK K K N + GI+ S+ + + + E +K+S DD +
Sbjct: 341 GLSNGEKKQKPVYTNKKKSNRSGTSSISSSGILESSPATSISVD---EPQKDSKDDSEKV 397
Query: 180 EKDTQ 184
EK+T+
Sbjct: 398 EKETE 402
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 30.3 bits (65), Expect = 0.41
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 156 ENSDVKFNHNTEDEKNSTDDDKIPEKDTQFFERVKIETKDALIRNKI--KERIHNRLTDE 213
E ++K +TE+ K ++ E D ER+ + K+ L + I + + +R+TD
Sbjct: 120 EEPELKAIEDTEESKKQLQREESKEADRLLQERIDVLCKNLLDKLSIWTETDMSDRVTDA 179
Query: 214 VITKIQFNETLEKKD 228
K+QF L K +
Sbjct: 180 FKQKMQFEAELLKDE 194
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 29.5 bits (63), Expect = 0.71
Identities = 23/107 (21%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Query: 108 EEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLE--QFNGIVNSTENSDVKFNHN 165
+E D+ + +K +A+ K+ V + K+++ + N I+ +E + +
Sbjct: 627 KELADLAESVKSSAEASAKIVSEIIQVPSVYHKHIVGPKGTTLNAIIGKSEENVIVQLGK 686
Query: 166 TEDEKNSTDDDKIPEKDTQFFERVKIETKDALIRNKIKERIHNRLTD 212
+STDDD ++ ERV E K + K E +H+ + +
Sbjct: 687 VSYRPDSTDDDVYIRGFSKDVERVVSEIKQVVRDAKNHEILHSHVEE 733
>SPCC338.07c |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 729
Score = 29.5 bits (63), Expect = 0.71
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 104 KLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKN 141
+++ EE+K +YK+LKKD+ + AE + K + K+
Sbjct: 598 EINEEEEKKIYKKLKKDLSKRLERAEKLKEADKSRAKS 635
>SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificity
factor complex subunit Ysh1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 28.7 bits (61), Expect = 1.2
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 114 YKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTED--EKN 171
+++ + +D + E S + + +V+ N I+ +E S N +ED E
Sbjct: 673 FEKYEASIDFSTMKVECSNEALRSRVVHVLS-RAINTILPFSEASQ---NDVSEDDFENE 728
Query: 172 STDDDKIPEKDTQFFERVKIETKDALIRNKIKE 204
+DDDKI E+ T+ + VK E K + + E
Sbjct: 729 ESDDDKIFEQQTKIEDDVKNENKTEPVEEQKSE 761
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 165 NTEDEKNSTDDDKIPEKDTQF-FERVKIETKDALIRNKIKE 204
NT+D N TDD+ I ++ + FE KIE+ D +I E
Sbjct: 284 NTDDLLNGTDDNNIVLREVKVSFENEKIESDDLDKNEEISE 324
>SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 27.9 bits (59), Expect = 2.2
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 84 DEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVM 143
D+E+ D + E +Q L +L+Y +K D+ K K N+V ++ LK +N
Sbjct: 3 DKELFDRSIFEETNQLHLYDQLNYLKKNDLQKFRK----LLNQVQQLDLRSLWLKYRNAK 58
Query: 144 CLEQFNGIVNSTE 156
Q N ++ +E
Sbjct: 59 ATSQENRKLSPSE 71
>SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 222
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/94 (18%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 110 KKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFN-GIVNSTENSD-VKFNHNTE 167
KK++ + K + N++ + +K K N++ E F + + E+ D +FN
Sbjct: 100 KKELENEKKANHSLKNELLKTREQIKNYSKINILIKELFGLEVADCIEDEDGYRFNCKNT 159
Query: 168 DEKNSTDDD-KIPEKDTQFFERVKIETKDALIRN 200
+ + + + +++ F R+ ++T + L+++
Sbjct: 160 GRRGTLEYQLLLDDQNFTFTPRLNVQTDEELMKH 193
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.9 bits (59), Expect = 2.2
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 145 LEQFNGIVNSTENSDVKFNHNTEDEKNSTDDDKIPEKDTQFFERVKIETKDAL-IRNKI- 202
L + I+N+T+ K N+ + ++ D +IP ++ ER K+ ++ L +R++I
Sbjct: 1462 LSEIMDILNTTKEELEKVRQNSNKSEGTSKDTEIPNEEE--MERKKVMQQEVLRLRSRIA 1519
Query: 203 KERIHNRL 210
KE N L
Sbjct: 1520 KELQKNEL 1527
Score = 27.1 bits (57), Expect = 3.8
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 250 SRNKKLCSILGQGEMRDKAEVLVEVERLNSVQAEL-TAEIATLHSELEKERSKNTD 304
S K+L +I + EMR+K ++ + + L V+AEL ++ + L E SKNTD
Sbjct: 1622 SHQKQLDNIRKELEMRNKLKLSMLEKNLARVRAELEQSKKKDSPAILSLEASKNTD 1677
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 27.9 bits (59), Expect = 2.2
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 15/127 (11%)
Query: 109 EKKDVYKQLKKDVDAANKVAEV-SRNVK----------KLKKKNVMCLEQFNGIVNSTEN 157
+ +D+ +L+K N +A + S+N K KL KKN E F + E
Sbjct: 727 KNRDLLSELEKSKSLNNSLAALESKNKKLENDLNLLTEKLNKKNA-DTESFKNTIREAEL 785
Query: 158 SDVKFNHNTEDEKNSTDD--DKIPEKDTQFFERVKIETKDALIRNKIKERIHNRLTDEVI 215
S N N +++N D +K+ E+ T+ E +D + ERI + DE+
Sbjct: 786 SKKALNDNLGNKENIISDLKNKLSEESTRLQELQSQLNQDKNQIETLNERI-SAAADELS 844
Query: 216 TKIQFNE 222
+ N+
Sbjct: 845 SMESINK 851
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 27.9 bits (59), Expect = 2.2
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 110 KKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDE 169
K D YK ++ N+V ++ V++L+++ + ++ I N E V H + E
Sbjct: 261 KSDCYKVESENKGLINEVMDMRNFVQQLEQELYAFEDDYSRIQNDEELLKVGMIHLNKSE 320
Query: 170 KNSTDDDKIPEKDTQFFERVKIETKDALIRNKIKERIHNRLTDEVITKI 218
+ ++ KI + F + E KD + + E IHN ++ T I
Sbjct: 321 NRTVEEMKIGD-----FGNTE-EAKDVCVSD---EDIHNVNIKQITTLI 360
Score = 25.8 bits (54), Expect = 8.8
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 129 EVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDDKI 178
E NV +K Q NG + N+ + + N EDE ++ D ++
Sbjct: 652 EDKENVNNIKISQPRNSLQTNGYIEGMANNVLDASFNVEDESHAISDSEL 701
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/62 (20%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 81 KQKDEEM--VDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLK 138
K+K++ + ++G E + I L+ + +Y Q K +++ S+N ++L+
Sbjct: 1088 KKKEDPISWMEGTMEDQTPDDISLASTSLSTNRSLYTQYTKSSNSSKMTRNTSKNNRRLE 1147
Query: 139 KK 140
+K
Sbjct: 1148 RK 1149
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 27.5 bits (58), Expect = 2.9
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Query: 103 SKLDYEEKKDVYKQLKKDVD-AANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVK 161
S E +K + LKK + A+N++ E K K+ + +E+ GI +
Sbjct: 711 SSTSIEAEKKILDDLKKQYNFASNQLNEAKIEQAKFKRDEQLLVEKIEGIKKRILLKRRE 770
Query: 162 FNHNTEDEKNSTDDDKIPEKDTQFFERVK 190
N E + D +KI + + E K
Sbjct: 771 VNSLESQELSVLDTEKIQTLERRISETEK 799
>SPAC607.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 231
Score = 27.5 bits (58), Expect = 2.9
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 83 KDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNV 142
K++E VD NF + + LL + +Y E K KK++ N + ++ K+++
Sbjct: 25 KEDESVDDNFPKQFKR--LLQQKEYHESK------KKEIKKGNLKNKKKKDYGKIQRLPG 76
Query: 143 MCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDDKIPEKDTQFFER 188
L +F+ VN K + DE + K K + ER
Sbjct: 77 ERLSEFSQRVNKAIPVSFKSGPSKIDEFTDKKEKKKIAKRKEKRER 122
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 83 KDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKL 137
+ +++V N EL+Q ++D EKKD Y+ + NK+ R KK+
Sbjct: 126 EQQKVVAANAIEELYQKKTALEIDLSEKKDAYEY------SCNKLNSYMRQTKKM 174
>SPAC823.04 |||rRNA processing protein, DUF947|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 189
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/39 (25%), Positives = 25/39 (64%)
Query: 263 EMRDKAEVLVEVERLNSVQAELTAEIATLHSELEKERSK 301
++RD+ ++ + ER S++ L + ++ + LE+ER++
Sbjct: 74 QLRDELKICKDQERAESIRQTLKSLLSKMERHLEEERAE 112
>SPBC800.08 |gcd10||translation initiation factor eIF-3 gamma
subunit Gcd10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 462
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 93 ESELHQAILLSKLDYEEKKDVYKQLKKDVD 122
ESEL++ L + YE KK + +LK +D
Sbjct: 276 ESELNEMKLRHRKRYETKKATFNRLKNTID 305
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 26.6 bits (56), Expect = 5.0
Identities = 21/109 (19%), Positives = 42/109 (38%)
Query: 117 LKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDD 176
L+ + +K +V+ N L K+N+ N T + + F DE + +
Sbjct: 1162 LRDEAIVPDKAIDVADNSNALLKENISSQSNRKADNNGTPSVNNSFTTANNDECSKENSQ 1221
Query: 177 KIPEKDTQFFERVKIETKDALIRNKIKERIHNRLTDEVITKIQFNETLE 225
PE T E V + + K+ + + ++ + + + TLE
Sbjct: 1222 IEPEGQTASREGVLSTPRSTRKKRKLGRKSQSSNVNKEVAISEVSATLE 1270
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 26.6 bits (56), Expect = 5.0
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 100 ILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSD 159
+LL+ L +E Y + ++A++ + V +L +N++ L VNS E +
Sbjct: 696 LLLNSLLEDESGRDYTAMMNWINASSSL---QLRVLELMTENLLSLSPNLTSVNSLETAM 752
Query: 160 VKFNHNTEDEKNS 172
++N N ED++NS
Sbjct: 753 TRYNIN-EDQRNS 764
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 26.6 bits (56), Expect = 5.0
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 136 KLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDEKN---STDDDKIPEKDTQFFERVKIE 192
K+ K++V L++ S + + K H + K S D D+I +KD + ++ K +
Sbjct: 49 KMAKRSVEELKRSADEEASVKRKEKKSKHEHKKHKKDKPSADKDRISKKDKKKSKKGKSK 108
Query: 193 TKDALIRNKIKE 204
TK+ I +E
Sbjct: 109 TKEESIEINAEE 120
>SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 103 SKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKK 140
SKL+++E + ++ +D++ + VS+ K+ KKK
Sbjct: 660 SKLNHKEPSNPIEERNEDIEPSEASTSVSKKRKQKKKK 697
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 163 NHNTEDE--KNSTDDDKIPEKDTQFFERVKIETKDALIRNKIKERIHNRLTDEVITKIQF 220
+HN D+ DD I E D +F+ +E K +I + +E+ T I
Sbjct: 396 DHNVSDDILMEEIDDVGITEADFDYFDLPNVEEKVEMIEPNFANTMTTLDNEEINTSISQ 455
Query: 221 NET 223
+ T
Sbjct: 456 SNT 458
>SPCC338.08 |ctp1|mug38|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 285
Score = 26.2 bits (55), Expect = 6.7
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 113 VYKQLKKDVDAAN-KVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDV--KFNHNTEDE 169
VY+QL ++ ++A + + KK + ++ + +S K + NT E
Sbjct: 15 VYRQLGNLLEQYEVEIARLKSQLVLEKKLRIQVEKELESVKTKQISSSASSKVSSNTIQE 74
Query: 170 KNST-DDDKIPEKDT 183
+ST D+D+IP DT
Sbjct: 75 LDSTTDEDEIPGSDT 89
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 174 DDDKIPEKDTQFFERVKIETKDALIRNKIKERIHNRLTDEVITK 217
D IPE + E++K + + + E + NRL D+ I K
Sbjct: 490 DTSNIPEIIARLSEKLKDREESEAVTEDLIEEVVNRLRDKAIHK 533
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 25.8 bits (54), Expect = 8.8
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 90 GNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEV 130
G H+++ L ++ +K D+Y+ K A+ VAE+
Sbjct: 2551 GKLYGVYHESVSLLEIQLSDKYDMYQNAKVQESRADAVAEL 2591
>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 491
Score = 25.8 bits (54), Expect = 8.8
Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 154 STENSD--VKFNHNTEDEKNSTDDDKIPEKDTQFFERVKIETKDALIRNKI 202
S E SD + + ++ + DD+K ++ F + IET+ +RN++
Sbjct: 276 SQEESDREIADRRSASEQAHEADDEKAIKRKEAFDALLNIETEFTFLRNRL 326
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.308 0.126 0.335
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,271,866
Number of Sequences: 5004
Number of extensions: 49610
Number of successful extensions: 225
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 205
Number of HSP's gapped (non-prelim): 41
length of query: 338
length of database: 2,362,478
effective HSP length: 73
effective length of query: 265
effective length of database: 1,997,186
effective search space: 529254290
effective search space used: 529254290
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 54 (25.8 bits)
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