Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001539-TA|BGIBMGA001539-PA|undefined
(338 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g40450.1 68418.m04905 expressed protein 37 0.017
At3g28770.1 68416.m03591 expressed protein 36 0.051
At3g58840.1 68416.m06558 expressed protein 35 0.090
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 34 0.12
At1g58250.1 68414.m06624 SABRE, putative similar to SABRE (GI:71... 33 0.27
At4g26110.1 68417.m03759 nucleosome assembly protein (NAP), puta... 33 0.36
At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative simila... 32 0.48
At1g52565.1 68414.m05934 expressed protein 32 0.48
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 32 0.48
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 32 0.63
At5g57120.1 68418.m07132 expressed protein weak similarity to SP... 32 0.63
At5g37530.1 68418.m04520 thiF family protein similar to SP|P3013... 32 0.63
At4g26630.1 68417.m03837 expressed protein 32 0.63
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 31 0.84
At2g45460.1 68415.m05654 forkhead-associated domain-containing p... 31 0.84
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 31 0.84
At1g37020.1 68414.m04616 Ulp1 protease family protein 31 0.84
At1g63980.1 68414.m07247 D111/G-patch domain-containing protein ... 31 1.1
At2g22795.1 68415.m02704 expressed protein 31 1.5
At1g11720.1 68414.m01345 starch synthase, putative strong simila... 31 1.5
At1g06170.2 68414.m00649 basic helix-loop-helix (bHLH) family pr... 31 1.5
At1g06170.1 68414.m00648 basic helix-loop-helix (bHLH) family pr... 31 1.5
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 30 1.9
At5g07660.1 68418.m00877 structural maintenance of chromosomes (... 30 1.9
At3g51220.1 68416.m05607 expressed protein contains Pfam doamin ... 30 1.9
At5g55820.1 68418.m06956 expressed protein 30 2.5
At3g61390.2 68416.m06872 U-box domain-containing protein several... 30 2.5
At3g61390.1 68416.m06871 U-box domain-containing protein several... 30 2.5
At2g24990.1 68415.m02988 RIO1 family protein similar to extragen... 30 2.5
At4g36770.1 68417.m05217 UDP-glucoronosyl/UDP-glucosyl transfera... 29 3.4
At3g24520.1 68416.m03079 heat shock transcription factor family ... 29 3.4
At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contai... 29 4.5
At5g51670.1 68418.m06406 expressed protein contains Pfam domain ... 29 4.5
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 29 4.5
At3g56150.1 68416.m06241 eukaryotic translation initiation facto... 29 4.5
At3g51880.1 68416.m05689 high mobility group protein alpha (HMGa... 29 4.5
At3g07340.1 68416.m00875 basic helix-loop-helix (bHLH) family pr... 29 4.5
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 29 4.5
At1g75360.1 68414.m08753 hypothetical protein 29 4.5
At1g58070.1 68414.m06581 expressed protein 29 4.5
At1g50230.1 68414.m05632 protein kinase family protein contains ... 29 4.5
At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive eff... 29 4.5
At5g18230.1 68418.m02139 transcription regulator NOT2/NOT3/NOT5 ... 29 5.9
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 29 5.9
At2g22610.1 68415.m02680 kinesin motor protein-related 29 5.9
At1g09470.1 68414.m01059 expressed protein ; expression supporte... 29 5.9
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 29 5.9
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 29 5.9
At1g03780.2 68414.m00358 targeting protein-related similar to mi... 29 5.9
At5g60030.1 68418.m07527 expressed protein 28 7.8
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 28 7.8
At4g38070.1 68417.m05377 bHLH family protein contains Pfam profi... 28 7.8
At4g23800.1 68417.m03422 high mobility group (HMG1/2) family pro... 28 7.8
At4g02710.1 68417.m00366 kinase interacting family protein simil... 28 7.8
At3g49410.1 68416.m05401 transcription factor-related contains w... 28 7.8
At1g13030.1 68414.m01511 sphere organelles protein-related conta... 28 7.8
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 37.1 bits (82), Expect = 0.017
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 11/200 (5%)
Query: 108 EEKKDVYKQLKKDV-DAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNT 166
EE K ++ D+ + +N A + + L +N+ L Q + N E + +FN
Sbjct: 2520 EELKVPSSKVLDDIQENSNTEAVTNFADRDLPVQNLSELIQSHQSPNQVEETSFEFNKAQ 2579
Query: 167 EDEKNSTDDDKIPEKDTQFFERVKIETKDALIRNKIKERIH--NRLTDEVITKIQFNETL 224
ED+K T D I Q ++ K + + A I +I E+ H N LTD V I +
Sbjct: 2580 EDKKEETVDALITNVQVQ--DQPKEDFEAAAIEKEISEQEHKLNDLTD-VQEDIGTYVKV 2636
Query: 225 EKKDXXXXXXXXXXXXXXXXXXXXXSRNKKLCSILGQGEMRDKAEVLVEVERLNSVQAEL 284
+ D +++ + + EM D + V VE N+ +
Sbjct: 2637 QVPDDEIKGDGHDSVAAQKEETSSIEEKREVEHV--KAEMEDAIKHEVSVEEKNNTSENI 2694
Query: 285 TAEIATLHSELEKERSKNTD 304
E A E+E+E K T+
Sbjct: 2695 DHEAA---KEIEQEEGKQTN 2711
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 35.5 bits (78), Expect = 0.051
Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 5/148 (3%)
Query: 81 KQKDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKK 140
K K +E +GN E SK ++KK K+ K+ + K + V KK
Sbjct: 915 KYKKDEKKEGNKEENKDTINTSSKQKGKDKKKKKKE-SKNSNMKKKEEDKKEYVNNELKK 973
Query: 141 NVMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDDKIPEKDTQFFERVKIETKDALIRN 200
E +ENS +K + EK ++D ++ + +E K +TK+ +
Sbjct: 974 Q----EDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAKKE 1029
Query: 201 KIKERIHNRLTDEVITKIQFNETLEKKD 228
K K + R + + E E +D
Sbjct: 1030 KKKSQDKKREEKDSEERKSKKEKEESRD 1057
Score = 28.3 bits (60), Expect = 7.8
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 7/113 (6%)
Query: 118 KKDVDAANKVAEVSRNVKKLKKKNVMCLE-QFNGIVNSTENSDVKFNHNTEDEKNSTDDD 176
+++V K +E +K + K+ +E + N ++STEN D + ED K +D
Sbjct: 772 EENVQGNKKESEKVEKGEKKESKDAKSVETKDNKKLSSTENRDEAKERSGEDNK----ED 827
Query: 177 KIPEKDTQFFERVKIETKDALIRNKIKERIHNRLTDEVITKIQFN--ETLEKK 227
K KD Q E + + N + L D+ +++ N E+++KK
Sbjct: 828 KEESKDYQSVEAKEKNENGGVDTNVGNKEDSKDLKDDRSVEVKANKEESMKKK 880
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 34.7 bits (76), Expect = 0.090
Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 109 EKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTED 168
E K ++ + ++ K AE R + +K V LE+ G++ E + +E+
Sbjct: 125 ELKKALAEIVEKLEGCEKEAEGLRKDRAEVEKRVRDLERKIGVLEVREMEEKSKKLRSEE 184
Query: 169 EKNSTDDDKIPEKDTQFFERVKIETKDALIRN--KIKE-RIHNRLTDEVITKIQFNE-TL 224
E DD+K +++ + ++ I L++N ++K+ + +LT+E +++ Q E L
Sbjct: 185 EMREIDDEK--KREIEELQKTVIVLNLELVKNVEELKKWKSKKKLTEEALSETQKREKEL 242
Query: 225 E-KKD 228
E KKD
Sbjct: 243 ELKKD 247
>At4g14760.1 68417.m02271 M protein repeat-containing protein contains
Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 34.3 bits (75), Expect = 0.12
Identities = 27/132 (20%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 91 NFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVA-EVSRNVKKLKKKNVMCLEQFN 149
N ELH+ + + DYE+ + + L+ + + VA ++KL N +
Sbjct: 1143 NENEELHKEVEELRKDYEDSRRMRANLEWQISELSDVAGRQEEEIRKLNALNENLESEVQ 1202
Query: 150 GIVNSTENSDVKFNH-NTEDEKNSTDDDKIPEKDTQFFERVKIET-KDALIRNKIKE--R 205
+ + V+ + + E ++ S + T F+ +++ ++ ++ NK+ E
Sbjct: 1203 FLNKEIQRQQVREEYLSLELQEKSNEIGLWDSAATSFYFDLQVSAIRELILENKVNELSG 1262
Query: 206 IHNRLTDEVITK 217
+ L DEV+TK
Sbjct: 1263 VCENLNDEVVTK 1274
>At1g58250.1 68414.m06624 SABRE, putative similar to SABRE (GI:719291)
[Arabidopsis thaliana]
Length = 2603
Score = 33.1 bits (72), Expect = 0.27
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 164 HNTEDEKNSTDDDKIPEKDTQFFERVKIETKDALIRNKIKERIHNR 209
H + + ++ FF+ V+I+ +D + NK+KE IH R
Sbjct: 1010 HKAGQSPKGAETSAVLDERKMFFDGVEIDVEDPVAINKVKEEIHKR 1055
>At4g26110.1 68417.m03759 nucleosome assembly protein (NAP),
putative similar to nucleosome assembly protein 1
[Glycine max] GI:1161252; contains Pfam profile PF00956:
Nucleosome assembly protein (NAP)
Length = 372
Score = 32.7 bits (71), Expect = 0.36
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 105 LDYEEKKDVYKQLKKDVDAANKVAE--VSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKF 162
+D E +D+ +++D D + + E + R V + M E F ++ E D+
Sbjct: 261 IDEERAEDLQNLMEQDYDIGSTIREKIIPRAVSWFTGE-AMEAEDFE--IDDDEEDDIDE 317
Query: 163 NHNTEDEKNSTDDDKIPEKDTQFFERVKIETK 194
+ + EDE++ DDD E++++ ++ I K
Sbjct: 318 DEDEEDEEDEEDDDDEDEEESKTKKKPSIGNK 349
>At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative similar
to RNA helicase GB:A57514 GI:897915 from [Rattus
norvegicus]; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 989
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 108 EEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDV-KFNHNT 166
E +D K LK+D + + E R +K ++ C E+ + + + + H
Sbjct: 79 ERDRDRGKYLKRDRERREREKEKGRKKQKKERSREDCNEESDDVKCGLKRKRTERSRHGD 138
Query: 167 EDEKNSTDDDKIPEKDTQFFERVK 190
+D + T D+++ ++ Q E V+
Sbjct: 139 DDVEKKTRDEQVEDEQKQLAEEVE 162
>At1g52565.1 68414.m05934 expressed protein
Length = 129
Score = 32.3 bits (70), Expect = 0.48
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 90 GNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNV 142
GN S+ Q IL S L EEKK K KK V A V E N ++ +KK++
Sbjct: 34 GNQTSD--QQILRSCLSSEEKKKQRKNKKKKVKFAENVKETKGNGEEYRKKSL 84
>At1g33390.1 68414.m04133 helicase domain-containing protein similar
to kurz protein [Drosophila melanogaster] GI:5869803;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1237
Score = 32.3 bits (70), Expect = 0.48
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 17/137 (12%)
Query: 93 ESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEV-SRNVKKLKKKNVMCLEQFNGI 151
E + + IL SK E D YK + +DV + + ++V R+ KL+K+ G+
Sbjct: 67 EEDKEKEILFSKT--AELLDKYK-ISEDVSSLLQSSKVIGRSATKLEKRRRAMQLSKAGV 123
Query: 152 VNSTENSDVKFNHNTEDEKNSTDDDKIPEKDTQFFERVKIETKDALIRNKIKERIHNRL- 210
TE+SD N D+ + D+ P E V+IET + + ++ +H L
Sbjct: 124 --ETEHSDESVEQNDNDDDSCMDEPTTP-------EHVEIET-PTFVTDSEQQLVHADLM 173
Query: 211 --TDEVITKIQFNETLE 225
+E +K++ ++T++
Sbjct: 174 ISAEESSSKLEVDDTVD 190
>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
identical to 26S proteasome AAA-ATPase subunit RPT3
GI:6652882 from [Arabidopsis thaliana]
Length = 408
Score = 31.9 bits (69), Expect = 0.63
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 84 DEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVM 143
DEE + G +S L + + + + E KD K LK+++ A + + ++V + + +
Sbjct: 26 DEEDLYGRLKS-LERQLEFTDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFME 84
Query: 144 CLEQFNGIVNSTENSD 159
++Q NGIV ST S+
Sbjct: 85 MVDQNNGIVGSTTGSN 100
>At5g57120.1 68418.m07132 expressed protein weak similarity to
SP|Q14978 Nucleolar phosphoprotein p130 {Homo sapiens}
Length = 330
Score = 31.9 bits (69), Expect = 0.63
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 81 KQKDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAE----VSRNVKK 136
K+ E +GN E+ + +A+ K D ++KK+ K+ K +V KV E + VK+
Sbjct: 66 KRDHEAAANGNTEANVVEAVENVKKDKKKKKN--KETKVEVTEEEKVKETDAVIEDGVKE 123
Query: 137 LKKK---NVMCLE-----QFNGIVNSTENSDVKFNHNTEDEKNSTDDDKIPEKDTQFF-E 187
KKK V E + + ++ K ++ + D +K+ +K + E
Sbjct: 124 KKKKKETKVKVTEEEKVKETDAVIEDGVKEKKKKKSKSKSVEADDDKEKVSKKRKRSEPE 183
Query: 188 RVKIETKDALIRNKIKERIHNRL-TDEVITKIQFNETLEKKD 228
K ET+D +K +++ N + DE + + ET K++
Sbjct: 184 ETKEETEDDDEESKRRKKEENVVENDEGVQETPVKETETKEN 225
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Query: 93 ESELHQAILLSKLDYEEKKDVYKQLKKDVDAAN-KVAEVSRNVKKLKKKNVMCLEQFNGI 151
ESE +L S Y E+ K KK + A + E++ ++ L++ L + +
Sbjct: 11 ESEQKALLLRSVAQYLERCGFSKCFKKLLSEAEIEKKELNTSLPDLEEIFSEFLNKRDHE 70
Query: 152 VNSTENSDVKFNHNTEDEKNSTDDDKIPEKDTQFFERVKIETKDALIRNKIKERIHNRLT 211
+ N++ E+ K K E + E K++ DA+I + +KE+ + T
Sbjct: 71 AAANGNTEANVVEAVENVKKDKKKKKNKETKVEVTEEEKVKETDAVIEDGVKEKKKKKET 130
Query: 212 DEVITK 217
+T+
Sbjct: 131 KVKVTE 136
Score = 30.3 bits (65), Expect = 1.9
Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 11/141 (7%)
Query: 93 ESELHQAILLSKL-DYEEKKDVYKQLKKDVDAAN-----KVAEVSRNVKKLKKKNVMCLE 146
E+E+ + L + L D EE + + AAN V E NVKK KKK +
Sbjct: 41 EAEIEKKELNTSLPDLEEIFSEFLNKRDHEAAANGNTEANVVEAVENVKKDKKKK----K 96
Query: 147 QFNGIVNSTENSDVKFNHNTEDEKNSTDDDKIPEKDTQFFERVKIETKDALIRNKIKERI 206
V TE VK + E + K E + E K++ DA+I + +KE+
Sbjct: 97 NKETKVEVTEEEKVK-ETDAVIEDGVKEKKKKKETKVKVTEEEKVKETDAVIEDGVKEKK 155
Query: 207 HNRLTDEVITKIQFNETLEKK 227
+ + + E + KK
Sbjct: 156 KKKSKSKSVEADDDKEKVSKK 176
>At5g37530.1 68418.m04520 thiF family protein similar to SP|P30138
Adenylyltransferase thiF (EC 2.7.7.-) {Escherichia
coli}; contains Pfam profile PF00899: ThiF family
Length = 457
Score = 31.9 bits (69), Expect = 0.63
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 104 KLDYEEKKDVYKQLKKDVDAANKVA-EVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKF 162
++D EE + K+L A ++ A +V R + + N + L +++ +T ++ V
Sbjct: 360 EVDVEEVMYIVKELWHGRSARDETAKDVGRGM--WRAMNELMLVRWDAKKPATVSNLVLL 417
Query: 163 NHNTEDEKNSTDDDKIPEKDTQFFERVKIETKDA 196
DE + +++ E +T+FFERV K A
Sbjct: 418 KFKEADEHETKTLEEVKESETEFFERVSCVLKKA 451
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 31.9 bits (69), Expect = 0.63
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 102 LSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVK 161
+ ++ +EK+D + K+V+AA AEV + + +K+ G + +N V+
Sbjct: 209 VENVEGKEKEDKEENKTKEVEAAK--AEVDESKVEDEKE---------GSEDENDNEKVE 257
Query: 162 FNHNTEDEKNSTDDDKIPEKD 182
EDEK T+DDK EK+
Sbjct: 258 SKDAKEDEKEETNDDKEDEKE 278
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 31.5 bits (68), Expect = 0.84
Identities = 33/159 (20%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
Query: 81 KQKDEEMVDGNFESE-LHQAI-LLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLK 138
K+ +EEM E++ LH I ++ +++ + KK Y Q+K+ D +++ ++ KKL
Sbjct: 231 KEFNEEMKSKITENQKLHTKIAVIDEIEDKSKKLEY-QVKEQEDIIQRLSMEIKDQKKLL 289
Query: 139 KKNVMCLEQFN-----------GIVNSTENSDVKFNHNTEDEKNSTDDD-KIPEKDTQFF 186
K+ +++F+ G +T + K ED + +D +I +
Sbjct: 290 KEQKDAIDKFSEDQKLMKRWSFGSKLNTNLLEKKMEELAEDFRMKMEDHIRILHRRIHVA 349
Query: 187 ERVKIETKDALIRNKIKERIHNRLTDEVITKIQFNETLE 225
E++ +E+K + I+ + + + +++ QF + E
Sbjct: 350 EQIHLESKSSYIKTRDNTQTEENRGNRAVSETQFKKIKE 388
>At2g45460.1 68415.m05654 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 915
Score = 31.5 bits (68), Expect = 0.84
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 109 EKKDVYKQLKKDVDAANKV-AEVSRNVKKLKKK---NVMCLEQFNGIVNSTENSDVKFNH 164
E +D +K++ NK+ AE ++ +L ++ ++ L + N ++ S + S +
Sbjct: 301 ELRDQLDTKQKELAQVNKLSAEQKNSIDELGERVSASLQTLSEANEVIQSQKASIAELKT 360
Query: 165 NTEDEKNSTDDDK---IPEKDTQFFERVKIETKDALIRNKIKERIHNRLTDEVITKIQFN 221
++E+N +++ I E R +IE ++ L R H R EVI K++ +
Sbjct: 361 GLDEERNQRREERETAIAELKAAI-HRCQIEAQEELKRFSDAAMRHEREQQEVINKMKES 419
Query: 222 E 222
E
Sbjct: 420 E 420
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 31.5 bits (68), Expect = 0.84
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 4/120 (3%)
Query: 103 SKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKF 162
+K+D + KKD KK ++ K ++ S +V+ K LE N+++ DVK
Sbjct: 847 NKMDGDSKKDGDSDEKKVMEVGKKSSD-SGSVEM--KPTAESLEDVKD-ENASKTVDVKQ 902
Query: 163 NHNTEDEKNSTDDDKIPEKDTQFFERVKIETKDALIRNKIKERIHNRLTDEVITKIQFNE 222
+ D K +KDT+ E K E K+ ++I TDE K + E
Sbjct: 903 ETGSPDTKKKEGASSSSKKDTKTGEDKKAEKKNNSETMSEGKKIDRNNTDEKEVKEKVTE 962
>At1g37020.1 68414.m04616 Ulp1 protease family protein
Length = 611
Score = 31.5 bits (68), Expect = 0.84
Identities = 24/150 (16%), Positives = 66/150 (44%), Gaps = 10/150 (6%)
Query: 71 ESTEAQWAQWKQKDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKD-VDAANKVAE 129
E+ +W+ + + +D +H + + +E+ + + + + + ++A
Sbjct: 157 ENMYPKWSDLPENQDMTLDNLIRDIIHNRLRNNAWKHEKNGNESTPIDDERAELSKRLAA 216
Query: 130 VSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDDKIPEKDTQFFERV 189
V ++K LK+ + + N + ++ + D FN++ EDE P K+ + ++
Sbjct: 217 VENDLKALKESHPADVS-INDVTSNNKGDDATFNNDKEDE--------TPNKELELQLKI 267
Query: 190 KIETKDALIRNKIKERIHNRLTDEVITKIQ 219
K TK + I + +++ + + K++
Sbjct: 268 KDATKGKKKKVAIMPKKASKIPKKKMAKVK 297
>At1g63980.1 68414.m07247 D111/G-patch domain-containing protein
contains Pfam profile PF01585: G-patch domain
Length = 391
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 156 ENSDVKFNHNTEDEKNSTDDDKIPEKDTQFFERVKIETKDALIRNKI-KERIHNRLTDEV 214
E F+++ +D+ + DDD+ E++ + + KD++I + + +R H+ + +
Sbjct: 257 EGKKTSFDNSDDDDDDDDDDDEEDEEEDEDESEADDDDKDSVIESSLPAKRKHDEIIEPK 316
Query: 215 ITKIQFNETLEKKD 228
I + + KKD
Sbjct: 317 IKLKNLCKQIVKKD 330
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/134 (20%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 81 KQKDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKK 140
+ K+ E ++ +F E + +K + EE K +K+ + + S+ K K+
Sbjct: 486 EDKETEKIESSFLEETKEKEDETK-EKEESSSQEKTEEKETETKDNEESSSQEETKDKEN 544
Query: 141 NVMCLEQFNGIVNSTEN---SDVKFNHNTEDEKNSTDDDKI------PEKDTQFFERVKI 191
+ E+ + S EN + K ++++E +++KI P+++T+ E KI
Sbjct: 545 EKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAPQEETKEKENEKI 604
Query: 192 ETKDALIRNKIKER 205
E +++ + + KE+
Sbjct: 605 EKEESASQEETKEK 618
>At1g11720.1 68414.m01345 starch synthase, putative strong
similarity to soluble-starch-synthase [Solanum
tuberosum] GI:1911166
Length = 1025
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 109 EKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNST---ENSDVKFNHN 165
+K+ K +KD +A + + KL V +Q + ++N + SD++ +
Sbjct: 24 QKRTQKKNGEKDSNATSTATNEVSGISKLPAAKVDVQKQSSVVLNERNVLDRSDIEDGSD 83
Query: 166 TEDEKNSTDDDKIPEK---DTQFFERVKIET 193
D+K + DDD + +K + + R +IET
Sbjct: 84 RLDKKTTDDDDLLEQKLKLERENLRRKEIET 114
>At1g06170.2 68414.m00649 basic helix-loop-helix (bHLH) family
protein contains Pfam profile:PF00010 helix-loop-helix
DNA-binding domain
Length = 420
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 79 QWKQKDEEMVDGNF--ESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKK 136
Q ++ +++VD NF +SE+ + L++K + + K+ K D ++ + +K
Sbjct: 279 QRNREGDDVVDENFKAQSEVVEQCLINKKNNALRCSWLKRKSKFTDVDVRIIDDEVTIKI 338
Query: 137 LKKKNVMCLEQFNGIVNSTE 156
++KK + CL + +V+ E
Sbjct: 339 VQKKKINCLLFVSKVVDQLE 358
>At1g06170.1 68414.m00648 basic helix-loop-helix (bHLH) family
protein contains Pfam profile:PF00010 helix-loop-helix
DNA-binding domain
Length = 420
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 79 QWKQKDEEMVDGNF--ESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKK 136
Q ++ +++VD NF +SE+ + L++K + + K+ K D ++ + +K
Sbjct: 279 QRNREGDDVVDENFKAQSEVVEQCLINKKNNALRCSWLKRKSKFTDVDVRIIDDEVTIKI 338
Query: 137 LKKKNVMCLEQFNGIVNSTE 156
++KK + CL + +V+ E
Sbjct: 339 VQKKKINCLLFVSKVVDQLE 358
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 30.3 bits (65), Expect = 1.9
Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 95 ELHQAILLSKLDYEEKKDVYKQL---KKDV-DAANKVAEVSRNVKKLKKKNVMCLEQFNG 150
E+ + S++D +E ++ L KDV + + + E R + ++K+ E G
Sbjct: 62 EMEANLSNSEVDIDEDFSFFQPLDLISKDVKELQDMLREKKRKERDMEKERDRSKENDKG 121
Query: 151 IVNSTENSDVKFNHNTEDEKNSTDDDKIPEKDTQFFERVKIETKDALIRNKIKERIHNRL 210
+ E + N EK+ + K E++ + ER K ++ + R K +ER ++
Sbjct: 122 VEREHEG-----DRNRAKEKDRHEKQKEREREREKLEREKEREREKIEREKERER--EKM 174
Query: 211 TDEVITKIQFNETLEKK 227
E+ + + LEK+
Sbjct: 175 EREIFEREKDRLKLEKE 191
>At5g07660.1 68418.m00877 structural maintenance of chromosomes
(SMC) family protein similar to SMC-like protein (MIM)
[Arabidopsis thaliana] GI:5880614; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain
Length = 1058
Score = 30.3 bits (65), Expect = 1.9
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 94 SELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVN 153
+ELH I+ + + EEK+ + ++L+ + K AE+ N K +N+ E G +
Sbjct: 717 NELHLEIMKFQKEIEEKESLLEKLQDSL----KEAELKANELKASYENL--YESAKGEIE 770
Query: 154 STENSDVKFNHNTEDEKNSTDDDKIPEKDTQFFERVKIETKDA 196
+ E ++ + EDE +S + +K +D ++V E K A
Sbjct: 771 ALEKAEDELKEK-EDELHSAETEKNHYEDI-MKDKVLPEIKQA 811
>At3g51220.1 68416.m05607 expressed protein contains Pfam doamin
PF05701: Plant protein of unknown function (DUF827)
Length = 186
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/93 (19%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 125 NKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDDKIPEKDTQ 184
+++ E N+KK +++N + + + E + K NH+ +N + ++ E D +
Sbjct: 47 DELVEAKENLKKAEEENKVLSQLIESLTQELETTKEKLNHSL---RNFPEHPQV-EDDLK 102
Query: 185 FFERVKIETKDALIRNKIKERIHNRLTDEVITK 217
F E + D + K+ N + + + K
Sbjct: 103 FIEESTVNEPDNITEIKMNRFDRNEVYGDRLEK 135
>At5g55820.1 68418.m06956 expressed protein
Length = 1826
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 110 KKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDE 169
K+DV + + +A+ ++AE N +KLKK+ M LE+ + + +++ ED
Sbjct: 1514 KRDVKVKALEAAEASKRIAEQKENDRKLKKE-AMKLERAKQEQENLKKQEIEKKKKEEDR 1572
Query: 170 K 170
K
Sbjct: 1573 K 1573
>At3g61390.2 68416.m06872 U-box domain-containing protein several
hypothetical proteins - Arabidopsis thaliana
Length = 435
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 14/88 (15%)
Query: 106 DYEEKKDVYKQLKKDVDAANKVAEVSRN--------VKKLKKKNVMCLEQFNGIVNSTEN 157
+ +++K+ K L+K D K+ S ++KL++KN + +E F GI E
Sbjct: 266 ELKQRKETEKALRKRNDELEKMRSESETQITESYTVIRKLQEKNNLSMETFRGIREEQEE 325
Query: 158 SDVKFNH------NTEDEKNSTDDDKIP 179
+K E+E+ ST + + P
Sbjct: 326 LKIKLREVSKLKGKREEEEASTSNHREP 353
>At3g61390.1 68416.m06871 U-box domain-containing protein several
hypothetical proteins - Arabidopsis thaliana
Length = 373
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 14/88 (15%)
Query: 106 DYEEKKDVYKQLKKDVDAANKVAEVSRN--------VKKLKKKNVMCLEQFNGIVNSTEN 157
+ +++K+ K L+K D K+ S ++KL++KN + +E F GI E
Sbjct: 266 ELKQRKETEKALRKRNDELEKMRSESETQITESYTVIRKLQEKNNLSMETFRGIREEQEE 325
Query: 158 SDVKFNH------NTEDEKNSTDDDKIP 179
+K E+E+ ST + + P
Sbjct: 326 LKIKLREVSKLKGKREEEEASTSNHREP 353
>At2g24990.1 68415.m02988 RIO1 family protein similar to extragenic
suppressor of the bimD6 mutation (SUDD) [Emericella
nidulans] GI:2338556, RIO1 [Saccharomyces cerevisiae]
GI:1359602; contains Pfam profile PF01163: RIO1 family
Length = 537
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 81 KQKDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKK 140
+++ EE DG E + +L +E+KK K+ KK V + + ++ K +KK+
Sbjct: 467 EEEGEEEEDGESEEGSEEEESEEELGHEDKKAARKEHKKKVKEEKRESRKTKTPKSVKKR 526
>At4g36770.1 68417.m05217 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 457
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 80 WKQKDEEMVDGNFES-ELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLK 138
W E+ ++ S EL A+ ++ D KK+V ++ K V + E+ +NVK+LK
Sbjct: 380 WPLYSEQKMNARMVSGELKIALQINVADGIVKKEVIAEMVKRVMDEEEGKEMRKNVKELK 439
Query: 139 K 139
K
Sbjct: 440 K 440
>At3g24520.1 68416.m03079 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 330
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 250 SRNKKLCSILGQGEMRDKAEVLVEVERLNSVQAELTAEIATLHSELE 296
+R K + GQ ++ D E++ E+ERL Q EL AEI ++ +E
Sbjct: 105 ARRKHARGMYGQ-DLED-GEIVREIERLKEEQRELEAEIQRMNRRIE 149
>At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contains
Pfam profiles PF00270:DEAD/DEAH box helicase and
PF00271: Helicase conserved C-terminal domain;
identical to cDNA RH27 helicase, partial GI:4033334
Length = 633
Score = 29.1 bits (62), Expect = 4.5
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 7/107 (6%)
Query: 105 LDYEEKKDVYKQLKK--DVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKF 162
+D E KK K+ KK D D A KK KKKN L+Q G N E+ +
Sbjct: 55 IDEEPKKKKKKKNKKRGDTDDGEDEAVAEEEPKKKKKKNKK-LQQ-RGDTNDEEDEVIAE 112
Query: 163 NHNTEDEKNSTDDD---KIPEKDTQFFERVKIETKDALIRNKIKERI 206
+ +K D K E++ + E K + +++ NK E +
Sbjct: 113 EEEPKKKKKKQRKDTEAKSEEEEVEDKEEEKKLEETSIMTNKTFESL 159
>At5g51670.1 68418.m06406 expressed protein contains Pfam domain
PF05003: protein of unknown function (DUF668)
Length = 474
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 106 DYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNV 142
DYE KKDV K +D NK+ ++VK LK +++
Sbjct: 192 DYENKKDVMKV----IDLQNKIERQKQHVKYLKDRSL 224
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 29.1 bits (62), Expect = 4.5
Identities = 41/222 (18%), Positives = 94/222 (42%), Gaps = 15/222 (6%)
Query: 93 ESELHQAILLSKLDYEEKKDVYKQLKKDVDAANK-VAEVSRNVKKLKKKNVMCLEQFNGI 151
E+EL + + + + K+L+ V++A + V E+++N+ +++ + +Q + +
Sbjct: 554 ENELSSFVEVHEAHKRDSSSQVKELEARVESAEEQVKELNQNLNSSEEEKKILSQQISEM 613
Query: 152 ---VNSTENSDVKFNHNTEDEKNS---TDDDKIPEKDTQFFERVKIETKDALIRNKIKER 205
+ E++ + + +E K S D++ +D + ++ T+ + +++
Sbjct: 614 SIKIKRAESTIQELSSESERLKGSHAEKDNELFSLRDIHETHQRELSTQLRGLEAQLESS 673
Query: 206 IHN--RLTDEVITKIQFNETLEKKDXXXXXXXXXXXXXXXXXXXXXSRNKKLCSILGQGE 263
H L++ + + + T+ K S+ K+ + E
Sbjct: 674 EHRVLELSESLKAAEEESRTMSTKISETSDELERTQIMVQELTADSSKLKEQLA-----E 728
Query: 264 MRDKAEVLVEVERLNSVQA-ELTAEIATLHSELEKERSKNTD 304
K +L E + + VQ EL A +ATL ELE R++ D
Sbjct: 729 KESKLFLLTEKDSKSQVQIKELEATVATLELELESVRARIID 770
>At3g56150.1 68416.m06241 eukaryotic translation initiation factor 3
subunit 8 / eIF3 p110 / eIF3c / p105 (TIF3C1) nearly
identical to SP|O49160 Eukaryotic translation initiation
factor 3 subunit 8 (eIF3 p110) (eIF3c) (p105)
{Arabidopsis thaliana}
Length = 900
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 115 KQLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTD 174
K+ KK + +N A S +KLKK N + + N + E + K +D+ + D
Sbjct: 127 KEAKKKMSTSNSKALNSMK-QKLKKNNKLYEDDINKYREAPEVEEEK--QPEDDDDDDDD 183
Query: 175 DDKIPEKD 182
DD++ + D
Sbjct: 184 DDEVEDDD 191
>At3g51880.1 68416.m05689 high mobility group protein alpha
(HMGalpha) / HMG protein alpha nearly identical to HMG
protein (HMGalpha) [Arabidopsis thaliana] GI:2832357;
contains Pfam profile PF00505: HMG (high mobility group)
box
Length = 178
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 104 KLDYEEKKDVYK-QLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKF 162
K YEEK K + +K +DA NK E + + + + ++ +G E
Sbjct: 100 KAPYEEKAAKRKAEYEKQMDAYNKNLEEGSDESEKSRSEINDEDEASGEEELLEKEAAGD 159
Query: 163 NHNTEDEKNSTDDD 176
+ E+E++ DDD
Sbjct: 160 DEEEEEEEDDDDDD 173
>At3g07340.1 68416.m00875 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 456
Score = 29.1 bits (62), Expect = 4.5
Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 4/116 (3%)
Query: 104 KLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFN 163
K+ V+K L V A E+SR K K+N + + E+SD K
Sbjct: 177 KMPRVSSSPVFKPLASHVPAGESSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRC 236
Query: 164 HNTEDEKNSTDDDKIPEKDTQFFERVKIETKDALIRNKIKERIHNRLTDEVITKIQ 219
+E+ + T P KD + V+ A + + ER+ E + +Q
Sbjct: 237 KKSEENGDKTKSID-PYKD---YIHVRARRGQATDSHSLAERVRREKISERMKLLQ 288
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 29.1 bits (62), Expect = 4.5
Identities = 29/160 (18%), Positives = 68/160 (42%), Gaps = 12/160 (7%)
Query: 69 LGESTEAQWAQWKQKDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVA 128
L ++ +AQ + +++ + ++H + ++K YE++KD + K++ A ++
Sbjct: 1433 LDDAQQAQATMQSEFNKQKQELEKNKKIHYTLNMTKRKYEKEKD--ELSKQNQSLAKQLE 1490
Query: 129 EVSRNVKKLKKKNVMCLEQFNGIVNSTENSDV--KFNHNTEDEKNSTDDDKIPEKDTQFF 186
E K + + + + + K+ H +DE +D + +KD +
Sbjct: 1491 EAKEEAGKRTTTDAVVEQSVKEREEKEKRIQILDKYVHQLKDEVRKKTED-LKKKDEEL- 1548
Query: 187 ERVKIETKDALIRNKIKERIHNRLTDEVITKIQFNETLEK 226
TK+ R +++ + + LT K + +E L K
Sbjct: 1549 ------TKERSERKSVEKEVGDSLTKIKKEKTKVDEELAK 1582
>At1g75360.1 68414.m08753 hypothetical protein
Length = 264
Score = 29.1 bits (62), Expect = 4.5
Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 8/144 (5%)
Query: 70 GESTEAQWAQWKQKDEEMVD---GNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANK 126
GES + + + ++ D +F + + A D + K + +VD A K
Sbjct: 88 GESNNESSSSNVETEPDLYDQYTSSFSTVIANASAAKVDDNDSNKQIVPTFNAEVDEAVK 147
Query: 127 VAEVSRNVKKLKKKNVMCLEQFNG--IVNSTEN-SDVKFNHNTEDEKNSTDDDKIPEKDT 183
+SR K + M E+ +V E+ + + ED++ D+ E T
Sbjct: 148 TKRISRRTKSEICRPAMEYERTESEKVVEDDESEKQIVPAYFPEDDEEVVVDEANREMVT 207
Query: 184 Q--FFERVKIETKDALIRNKIKER 205
+ R K ETK +IR I+ R
Sbjct: 208 TPGIYRRTKSETKKEIIRPVIEIR 231
>At1g58070.1 68414.m06581 expressed protein
Length = 284
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 269 EVLVEVERLNSVQAELTAEIATLHSELEKERSKNTDPRAXXXXXXXXXXXIRFDVSSEAV 328
E EV+ L ++E +ATL++EL K +SK +A + VS +
Sbjct: 142 ETKTEVKMLKERESETEVALATLNAELHKNKSKIA--KAEADAAGKSAAAMTKSVSFKDT 199
Query: 329 VTKESG 334
KE+G
Sbjct: 200 KEKENG 205
>At1g50230.1 68414.m05632 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 269
Score = 29.1 bits (62), Expect = 4.5
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 111 KDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDEK 170
K + KQ K D D + E+ ++KLK +N+ +E + N+ E V E +
Sbjct: 35 KFIMKQGKTDKDIHSLRQEIEI-LRKLKHENI--IEMLDSFENAREFCVVTEFAQGELFE 91
Query: 171 NSTDDDKIPEKDTQFFERVKIETKDALIRNKIKER 205
DD +PE+ Q + ++ D L N+I R
Sbjct: 92 ILEDDKCLPEEQVQAIAKQLVKALDYLHSNRIIHR 126
>At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1939
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 71 ESTEAQWAQWKQKDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEV 130
ES +A+ + + DG S+ I L +L YE+K+ +YK L K
Sbjct: 1319 ESLDAKDKPENEHHNKDDDGKLMSDAELGIRLRRL-YEQKRKIYKDLSAVQAQERKANYE 1377
Query: 131 SRNVKKLKKKNVM 143
R +K+ +K+++
Sbjct: 1378 MRTLKQKLRKSIL 1390
>At5g18230.1 68418.m02139 transcription regulator NOT2/NOT3/NOT5
family protein contains Pfam domain PF04153: NOT2 / NOT3
/ NOT5 family
Length = 843
Score = 28.7 bits (61), Expect = 5.9
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 120 DVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDDKIP 179
D D N+ + ++KK KK +Q + S+E D K + E++ D K+
Sbjct: 34 DTDNVNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKV--SASYEQSLVDARKLI 91
Query: 180 EKDTQFFERVKIETK 194
EK+ + F+ + ETK
Sbjct: 92 EKEMERFKICEKETK 106
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus
musculus];
Length = 275
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 103 SKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKF 162
SK+D E K++ + + + N E N + +N + NG N EN D
Sbjct: 151 SKIDEETKRNDEETENDNTEEENGNDEEDENGNDEEDENDDENTEENG--NDEENDDENT 208
Query: 163 NHNTEDEKNSTDDDK 177
N DE+N +D++
Sbjct: 209 EENGNDEENEKEDEE 223
>At2g22610.1 68415.m02680 kinesin motor protein-related
Length = 1093
Score = 28.7 bits (61), Expect = 5.9
Identities = 30/139 (21%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 71 ESTEAQWAQWKQKDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEV 130
+ +E W+QK ++ + ESE + + K+ E K +Q ++ V K+ E+
Sbjct: 881 KESEGSSLVWQQKVKDYENKLKESEGNSLVWQQKIKELEIKHKDEQSQEAVLLRQKIKEL 940
Query: 131 SRNVKKLKK--KNVMCLEQFNGIVNSTENSDVK--FNHNTEDEKNSTDDDKIPEKDTQFF 186
+K+ +K + + +F + N+T N +VK F + +N + I +
Sbjct: 941 EMRLKEQEKHIQEMATTREFPEVANATPN-EVKTCFKEDNFGNENMESNTNI----LRTS 995
Query: 187 ERVKIETKDALIRNKIKER 205
R+K + D+L N++ +
Sbjct: 996 NRLKTKRHDSLNLNEMTRK 1014
>At1g09470.1 68414.m01059 expressed protein ; expression supported
by MPSS
Length = 336
Score = 28.7 bits (61), Expect = 5.9
Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Query: 108 EEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCLE----QFNGIVNSTENSDVKFN 163
+E +D +L + ++ K V + +K + ++ +E + +V + ENS+V+
Sbjct: 141 KEHEDQVTRLGEQLENLRKELRVRESSQKQLRDELLKVEGDIMRAVSVVKTKENSEVRNM 200
Query: 164 HNTEDEKNSTDDDKIPEKDTQFFERVKIETKDALIRNKIKERIHNRLTDEVITKIQFNET 223
N + KNS +K+ R++ E K + K + L D+V + + ++
Sbjct: 201 LNEDTPKNSERINKLLTAKDDEIARLRDELKIISAHWRFKTK---ELEDQVENQRRIDQE 257
Query: 224 LEKK 227
L+KK
Sbjct: 258 LKKK 261
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 147 QFNGIVNSTENSDVKFNHNTEDEKNSTDD--DKIPEKDTQFFERVKIETKDALIRNKIKE 204
Q N I ST+N VK + +K+ +DD +I + E+ +E+K + +KE
Sbjct: 557 QVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEKLSALVAEKSVLESKFEQVEIHLKE 616
Query: 205 RIHNRLTDEVITKIQ 219
+ E+ +K+Q
Sbjct: 617 EVEK--VAELTSKLQ 629
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 108 EEKKDVYKQLKKDVDAAN-KVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNT 166
E+ K+ L+ +D + K E+S+ ++ K V ++Q I TEN +K ++
Sbjct: 1004 EQLKESVSSLQNKIDESERKYEEISKISEERIKDEVPVIDQSAIIKLETENQKLKALVSS 1063
Query: 167 EDEKNSTDDDKIPEKDTQFFERVK 190
+EK D K E E++K
Sbjct: 1064 MEEKIDELDRKHDETSPNITEKLK 1087
>At1g03780.2 68414.m00358 targeting protein-related similar to
microtubule-associated protein / targeting protein for
Xklp2 ((TPX2) GI:8926138) {Homo sapiens}; similar to
Restricted expression proliferation associated protein
100 (p100) (Differentially expressed in lung cells 2)
(DIL-2) (Targeting protein for Xklp2) (C20orf1 protein)
(C20orf2 protein) (Protein FLS353)(SP:Q9ULW0) {Homo
sapiens}
Length = 725
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/59 (30%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 86 EMVDGNFESELHQAILLSKLDYE--EKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNV 142
E+ + N E H+A+ + D++ EK++ YK+ +++ +AA K+ E R +K+++K V
Sbjct: 610 EIQEFNLHVE-HRAVERADFDHKIKEKENQYKRYREESEAA-KMVEEERALKQMRKTMV 666
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 28.3 bits (60), Expect = 7.8
Identities = 27/140 (19%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
Query: 71 ESTEAQWAQWKQKDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEV 130
E+ + +++DE+ + + ++++ + KL+ E++ + ++ KK + K
Sbjct: 103 EAVSVESVYGRERDEKKMKKSKDADVVDEKVNEKLEAEQRSEERRERKK--EKKKKKNNK 160
Query: 131 SRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTE--DEKNSTDDDKIPEKDTQFFER 188
+V K K + EQ + + K N++ + DEK +D+ +K + E+
Sbjct: 161 DEDVVDEKVKEKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDE---QKSAEIKEK 217
Query: 189 VKIETKDALIRNKIKERIHN 208
K + +D ++ K KE++ +
Sbjct: 218 KKNKDED-VVDEKEKEKLED 236
Score = 28.3 bits (60), Expect = 7.8
Identities = 25/126 (19%), Positives = 52/126 (41%)
Query: 81 KQKDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKK 140
++K+++ N + ++ + KL+ E+K K+ KK N +V +KL+ +
Sbjct: 149 RKKEKKKKKNNKDEDVVDEKVKEKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDE 208
Query: 141 NVMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDDKIPEKDTQFFERVKIETKDALIRN 200
+ + D K EDE+ S + K +K + E + E + + +
Sbjct: 209 QKSAEIKEKKKNKDEDVVDEKEKEKLEDEQRSGERKKEKKKKRKSDEEIVSEERKSKKKR 268
Query: 201 KIKERI 206
K E +
Sbjct: 269 KSDEEM 274
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 28.3 bits (60), Expect = 7.8
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 84 DEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKN-- 141
+E++V G+ ++ +A + +D ++K++ K+ + A + VK+ K++
Sbjct: 165 EEKLVGGDKGDDVDEAEKVENVDEDDKEEALKEKNEAELAEEEETNKGEEVKEANKEDDV 224
Query: 142 -----VMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDDKIPEKD 182
V E + S + ++ K EDEK + DDK EK+
Sbjct: 225 EADTKVAEPEVEDKKTESKDENEDK-EEEKEDEKEESMDDKEDEKE 269
Score = 28.3 bits (60), Expect = 7.8
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 83 KDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAEVSRNVKKLKKKNV 142
K+E + + N E+EL + +K EE K+ K+ DV+A KVAE KK + K+
Sbjct: 191 KEEALKEKN-EAELAEEEETNK--GEEVKEANKE--DDVEADTKVAEPEVEDKKTESKDE 245
Query: 143 MCLEQFNGIVNSTENSDVKFNH-------NTEDEKNSTDDDKIPEKD 182
++ E+ D K + + EDEK ++DDK +K+
Sbjct: 246 NEDKEEEKEDEKEESMDDKEDEKEESNDDDKEDEKEESNDDKEDKKE 292
>At4g38070.1 68417.m05377 bHLH family protein contains Pfam profile:
PF00010 helix-loop-helix DNA-binding domain; PMID:
12679534; putative bHLH131 transcription factor
Length = 1513
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/84 (22%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 126 KVAEVSRNVKKLKKKNV---MCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDDK---IP 179
++ E SR + +LK+ N CL + + +V + + K N ED+ +++K +
Sbjct: 56 EIEEKSREIAELKRANEELQRCLREKDSVVKRVNDVNDKLRANGEDKYREFEEEKRNMMS 115
Query: 180 EKDTQFFERVKIETKDALIRNKIK 203
D + + +E K+ + R +I+
Sbjct: 116 GLDEASEKNIDLEQKNNVYRAEIE 139
>At4g23800.1 68417.m03422 high mobility group (HMG1/2) family
protein similar to HMG2B [Homo sapiens] GI:32335;
contains Pfam profile PF00505: HMG (high mobility group)
box
Length = 456
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 167 EDEKNSTDDDKIPEKDTQFFERVKIETKDALIRNKIKERIHNRLTDEVITKIQFNETLE 225
E+ K + +++ + +K + E +K+ ++AL K KE+ N + E TK + NE ++
Sbjct: 318 EEYKRTKEEEALSQKKEEE-ELLKLHKQEALQMLKKKEKTDNLIKKEKATKKKKNENVD 375
>At4g02710.1 68417.m00366 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1111
Score = 28.3 bits (60), Expect = 7.8
Identities = 31/181 (17%), Positives = 73/181 (40%), Gaps = 9/181 (4%)
Query: 123 AANKVAEVSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDDKIPEKD 182
A +V + + V KL K QF +N + VK +H E+ ++ + + +
Sbjct: 375 AGVEVENLKQTVSKLIKDKEASELQFQQCLNIIASLKVKLHHAQEETQSLSHEIE----- 429
Query: 183 TQFFERVKIETKDALIRNKIKERIHNRLTDEVITKI-QFNETLEKKDXXXXXXXXXXXXX 241
++K + L+ + + +H+ L D ++ K+ ++ L +K
Sbjct: 430 -DGVAKLKFSEEKCLLLERSNQNLHSEL-DSLLEKLGNQSQKLTEKQTELVKLWSCVQAE 487
Query: 242 XXXXXXXXSRNKKLCSILGQGEMRDKAEVLVEVERLNSVQAELTAEIATLHSELEKERSK 301
+ + L + Q + + + VE++ ++ + ++ LH ELE+ + +
Sbjct: 488 HLHFQEAETAFQTLQQLHSQSQ-EELNNLAVELQTVSQIMKDMEMRNNELHEELEQAKVE 546
Query: 302 N 302
N
Sbjct: 547 N 547
>At3g49410.1 68416.m05401 transcription factor-related contains weak
similarity to transcription factor IIIC63 (GI:5281316)
[Homo sapiens]
Length = 559
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 111 KDVYKQLKKDVDAANKVAEVSRNVKKLKKKNVMCL---EQFNGIVNSTENSDVKFNHNTE 167
+DV+K ++++ + + KV +K K+ E + EN D N + E
Sbjct: 400 EDVFKSIQEEFERSEKVQIQKETLKPSLVKHREATKGSEDMETFKSVNENVDANVNEDGE 459
Query: 168 DEKNSTDDDKIPEKDTQ 184
DE N D+D+ E++ +
Sbjct: 460 DE-NLDDEDEDEEEEEE 475
>At1g13030.1 68414.m01511 sphere organelles protein-related contains
weak similarity to Swiss-Prot:Q09003 sphere organelles
protein SPH-1 (Sphere protein 1) [Xenopus laevis]
Length = 608
Score = 28.3 bits (60), Expect = 7.8
Identities = 34/156 (21%), Positives = 70/156 (44%), Gaps = 9/156 (5%)
Query: 70 GESTEAQWAQWKQKDEEMVDGNFESELHQAILLSKLDYEEKKDVYKQLKKDVDAANKVAE 129
G +E++ + +++ EE V S+ + ++ + KK ++ D A
Sbjct: 138 GYESESEEDELEEEAEEFVPEKKASKKRKTSSKNQ-STKRKKCKLDTTEESPDERENTAV 196
Query: 130 VSRNVKKLKKKNVMCLEQFNGIVNSTENSDVKFNHNTEDEKNSTDDDKIPEKDTQFFERV 189
VS VKK KKK + ++ N N +N+D T+ +++S ++ K+ ++
Sbjct: 197 VSNVVKKKKKKKSLDVQSAN---NDEQNND-STKPMTKSKRSSQQEE---SKEHNDLCQL 249
Query: 190 KIETKDALIRNKIKERIHNRLTDEVITKIQFNETLE 225
ETK R+ +++ + E TK++ E L+
Sbjct: 250 SAETKKTPSRSARRKKAKRQWLREK-TKLEKEELLQ 284
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.308 0.126 0.335
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,506,160
Number of Sequences: 28952
Number of extensions: 245573
Number of successful extensions: 1029
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 993
Number of HSP's gapped (non-prelim): 86
length of query: 338
length of database: 12,070,560
effective HSP length: 81
effective length of query: 257
effective length of database: 9,725,448
effective search space: 2499440136
effective search space used: 2499440136
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 60 (28.3 bits)
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