Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001538-TA|BGIBMGA001538-PA|IPR006849|IKI3
(590 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical... 83 7e-16
U29487-1|AAA68768.1| 253|Caenorhabditis elegans 2 (zwei) ig-dom... 37 0.046
AF456251-1|AAL59609.1| 253|Caenorhabditis elegans secreted 2-im... 37 0.046
U00044-8|AAA50680.1| 108|Caenorhabditis elegans Hypothetical pr... 33 0.43
U50300-7|AAC48106.1| 645|Caenorhabditis elegans Hypothetical pr... 33 0.75
U41020-2|AAA82332.3| 1732|Caenorhabditis elegans Osmotic avoidan... 32 0.99
DQ360811-1|ABC88648.1| 1737|Caenorhabditis elegans intraflagella... 32 0.99
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 31 2.3
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 31 2.3
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 31 2.3
AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein... 30 4.0
AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal chem... 30 4.0
Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical pr... 29 7.0
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 29 7.0
AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical ... 29 9.2
>AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical
protein Y110A7A.16 protein.
Length = 1250
Score = 82.6 bits (195), Expect = 7e-16
Identities = 83/353 (23%), Positives = 153/353 (43%), Gaps = 31/353 (8%)
Query: 2 EWSPDQELLAIVTKEMHMVLLSCTYDPINEIKLHNQEFGEKQF-ITVGWGKKETQFHGSE 60
EW+ D++ LA+ + + L + P E L E K + VGWG + TQF GS
Sbjct: 109 EWTADEQTLALADNQT-LYLADSSLVPFAERPLIFSENERKSAPVNVGWGSESTQFRGSA 167
Query: 61 G--KQAAKIKNDIVSDDSTASDKVKITWRGDGNLYAIGF--AMDGLRHFKVFDREGHLLY 116
G K KI+ + S K + WR DG + A+ F + + R+ VFDR G +L
Sbjct: 168 GKLKPGEKIEKE-KEQIEQHSRKTSVHWRWDGEIVAVSFYSSQNDTRNLTVFDRNGEILN 226
Query: 117 TSE-KQKGLEDNIVWRPSGNVI-TTTQKIENQYKVTFFEKNGLKHREFSI-----PVEHG 169
+ L +P+ N++ + Q+ + ++ +E+NG + + +E
Sbjct: 227 NMNIRNIYLSHCFAHKPNANLLCSAIQENGSDDRIVIYERNGETRNSYVVKWPANQIEDR 286
Query: 170 TYVENIMWSSDSEILTLQCKDTETNTQKVLLYTTSNYHWYLKQTLLFRSNQRINKIIWDN 229
+E I W+S IL++Q + ++ + SNY + K F + IIW
Sbjct: 287 RIIEKIEWNSTGTILSMQ--TSLGKKHQLEFWHLSNYEFTRKCYWKFSES-----IIW-- 337
Query: 230 DFDISNNKKMHIILQNGSYLIYSWIWNIDHSKSXXXXXXXXXXXXXGDKLLITGFRQTVV 289
+ + + ++L++G + +I + S D+L + + VV
Sbjct: 338 KWSTVECQNIEVLLESGQFFSV----HITPTASFSDVISQNVVVAT-DELRMYSLCRRVV 392
Query: 290 PPPMASLEIKLESTAQAICFAPKNENVNPNSFFVITVDNKLLFYSQKEKHPLN 342
PPPM I+ S A + + +V + + +I+ +LF+ +K+++ N
Sbjct: 393 PPPMCDYSIQCLSDIVAYTTSTHHVHVITSDWKIISC---MLFFKKKKRNYSN 442
Score = 34.3 bits (75), Expect = 0.24
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 450 LYQEALKHXXXXXXXXXXXXXDYGQHLKLKKYYTEAAIIYERANNNDKAIECYKEALEWE 509
LYQ+AL Y L+ K ++ EAA+ YE + N++K ++C++ + + +
Sbjct: 910 LYQDALTLVKPGDRRYKQCCELYAAELERKVHWREAALFYELSGNSEKTLKCWEMSRDVD 969
Query: 510 -LAIKLAYFWPKA-QFKVLCWELVTALKEEKRHEE 542
LA A + K+ ++ T L+E ++ +E
Sbjct: 970 GLAASARRLAVDAGKLKIHAIKMSTTLREARQPKE 1004
>U29487-1|AAA68768.1| 253|Caenorhabditis elegans 2 (zwei) ig-domain
protein protein4 protein.
Length = 253
Score = 36.7 bits (81), Expect = 0.046
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 188 CKDTETNTQKVLLYTTSNYHWYLK-QTLLFRSNQRINKIIWDNDFDISNNKKMHIILQNG 246
C+ + +++ +T S + TL+ R+NQ+++ + ND + NN K +L NG
Sbjct: 154 CRSNHKSAPEIVFWTDSRFEMTGNVATLVCRANQQVDWVWMSNDELVKNNDKF-TVLSNG 212
Query: 247 SYLIYSWIWN 256
+I + +W+
Sbjct: 213 DLVIKNIVWD 222
>AF456251-1|AAL59609.1| 253|Caenorhabditis elegans secreted
2-immunoglobulin-domainprotein ZIG-4 protein.
Length = 253
Score = 36.7 bits (81), Expect = 0.046
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 188 CKDTETNTQKVLLYTTSNYHWYLK-QTLLFRSNQRINKIIWDNDFDISNNKKMHIILQNG 246
C+ + +++ +T S + TL+ R+NQ+++ + ND + NN K +L NG
Sbjct: 154 CRSNHKSAPEIVFWTDSRFEMTGNVATLVCRANQQVDWVWMSNDELVKNNDKF-TVLSNG 212
Query: 247 SYLIYSWIWN 256
+I + +W+
Sbjct: 213 DLVIKNIVWD 222
>U00044-8|AAA50680.1| 108|Caenorhabditis elegans Hypothetical
protein K04C2.5 protein.
Length = 108
Score = 33.5 bits (73), Expect = 0.43
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Query: 335 QKEKHPLNYEAYNSQQFDKSDF---PFQYHHWLWV-DSQTIVCAMTDEKSTSVIELTMVN 390
Q K + YE+ + F S PF WL V D +I C +T E ELT
Sbjct: 19 QASKRRIQYESVSQFLFHNSKLCGDPFSDAVWLPVLDLCSIECEITSEYCVENEELTQQC 78
Query: 391 DKLVKSNSVHVRGVVTQIQAHPTNKSLLFL 420
KL + +R + QIQ H ++ ++L
Sbjct: 79 KKLPEDCQALLRKAIKQIQRHIRSQKPVYL 108
>U50300-7|AAC48106.1| 645|Caenorhabditis elegans Hypothetical
protein R03H4.5 protein.
Length = 645
Score = 32.7 bits (71), Expect = 0.75
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 132 PSGNVITTTQKIENQYKVTF-------FEKNGLKHREFSIPVEHGTYVENIMWSSDSEIL 184
P GN + I N Y + F F KN + R SI +GTYV + W + L
Sbjct: 422 PPGNGTASVMMIGNSYILNFVDQIEASFHKNYSEFRYISIIASYGTYVSS--WKISQQAL 479
Query: 185 TLQCKDTETNTQKVL 199
+ K E++ VL
Sbjct: 480 EISKKQVESHKPDVL 494
>U41020-2|AAA82332.3| 1732|Caenorhabditis elegans Osmotic avoidance
abnormal protein1 protein.
Length = 1732
Score = 32.3 bits (70), Expect = 0.99
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 17/109 (15%)
Query: 482 YTEAAIIYERANNNDKAIECYKEALEWELAIKLAYF-WPKAQFKVLCWELVTALKEEKRH 540
Y +A +YE+ + DKA+E +K+ + AI+LA F +P+ ++VT +E H
Sbjct: 801 YDKAGDVYEKLKDFDKAVEYFKKGDAYGKAIQLARFAFPE--------KVVTLEQEWGLH 852
Query: 541 EEALIILEQFYGDPEECISYAVETSHYKKALRLCSLYDKLQLKGISIVK 589
E + G + +++ VE + KKA+ ++ K K +SIV+
Sbjct: 853 LE-------YIGQYDAAVNHFVEANDLKKAVE-AAIRAKEWPKALSIVE 893
>DQ360811-1|ABC88648.1| 1737|Caenorhabditis elegans intraflagellar
transport protein protein.
Length = 1737
Score = 32.3 bits (70), Expect = 0.99
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 17/109 (15%)
Query: 482 YTEAAIIYERANNNDKAIECYKEALEWELAIKLAYF-WPKAQFKVLCWELVTALKEEKRH 540
Y +A +YE+ + DKA+E +K+ + AI+LA F +P+ ++VT +E H
Sbjct: 806 YDKAGDVYEKLKDFDKAVEYFKKGDAYGKAIQLARFAFPE--------KVVTLEQEWGLH 857
Query: 541 EEALIILEQFYGDPEECISYAVETSHYKKALRLCSLYDKLQLKGISIVK 589
E + G + +++ VE + KKA+ ++ K K +SIV+
Sbjct: 858 LE-------YIGQYDAAVNHFVEANDLKKAVE-AAIRAKEWPKALSIVE 898
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 202 TTSNYHWYLKQTLLFRSNQRINKIIWDNDFDISN 235
T Y W ++QT++F+ Q +N I+ D+ D++N
Sbjct: 107 TDEEYEWCIEQTIVFKDGQPLNMIL-DDGGDLTN 139
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 202 TTSNYHWYLKQTLLFRSNQRINKIIWDNDFDISN 235
T Y W ++QT++F+ Q +N I+ D+ D++N
Sbjct: 107 TDEEYEWCIEQTIVFKDGQPLNMIL-DDGGDLTN 139
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 202 TTSNYHWYLKQTLLFRSNQRINKIIWDNDFDISN 235
T Y W ++QT++F+ Q +N I+ D+ D++N
Sbjct: 107 TDEEYEWCIEQTIVFKDGQPLNMIL-DDGGDLTN 139
>AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein
protein.
Length = 760
Score = 30.3 bits (65), Expect = 4.0
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 9/130 (6%)
Query: 84 ITWRGDGNLYAIGFAMDGLRHFKVFDREGHLLYTSEKQKGLEDNIVWRPSGNVITTTQKI 143
I+W DG L+A+G ++ D+ G + G + W P G +
Sbjct: 233 ISWNTDGTLFAVG----SHNILRLCDKSGWSHSLEKMNAGSVMALSWSPDGTQLAVGTAA 288
Query: 144 ENQYKVTFFEKNGLKHREFSIPVEHGTYVENIMWSSDSEILTLQCKDTETN---TQKVLL 200
+ +K L + EF I T +E SS+ TL+ K+ + K L+
Sbjct: 289 GLVFHAHIIDKR-LTYEEFEIVQTQKTVIEVRDVSSEVSRETLETKERISKIAILYKYLI 347
Query: 201 YTTSNYHWYL 210
TS+ H Y+
Sbjct: 348 VVTSS-HIYI 356
>AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal
chemotaxis protein 2 protein.
Length = 760
Score = 30.3 bits (65), Expect = 4.0
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 9/130 (6%)
Query: 84 ITWRGDGNLYAIGFAMDGLRHFKVFDREGHLLYTSEKQKGLEDNIVWRPSGNVITTTQKI 143
I+W DG L+A+G ++ D+ G + G + W P G +
Sbjct: 233 ISWNTDGTLFAVG----SHNILRLCDKSGWSHSLEKMNAGSVMALSWSPDGTQLAVGTAA 288
Query: 144 ENQYKVTFFEKNGLKHREFSIPVEHGTYVENIMWSSDSEILTLQCKDTETN---TQKVLL 200
+ +K L + EF I T +E SS+ TL+ K+ + K L+
Sbjct: 289 GLVFHAHIIDKR-LTYEEFEIVQTQKTVIEVRDVSSEVSRETLETKERISKIAILYKYLI 347
Query: 201 YTTSNYHWYL 210
TS+ H Y+
Sbjct: 348 VVTSS-HIYI 356
>Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical protein
R09E10.7 protein.
Length = 1717
Score = 29.5 bits (63), Expect = 7.0
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 202 TTSNYHWY----LKQTLLFRSNQRINKIIWDNDFDISNNKKMHI 241
T S+ H Y L + +LF + +N +IW N N+++H+
Sbjct: 1160 TVSDAHVYHMNELSKKILFEAGGSLNNVIWGNPVTGGTNRRLHL 1203
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 29.5 bits (63), Expect = 7.0
Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 12/128 (9%)
Query: 128 IVWRPSGNVITTTQKIENQYKVTFFEKNGLKHREFSIPVEHGTYVENIMWSSDSEILTLQ 187
I+W+ N+ Q +ENQ V F NG K+ P+E ++ + + LT+
Sbjct: 2508 IIWK---NLENAVQYMENQKNVNF--SNGSKNLILKTPLEETMQIDIFGQNFERSALTIT 2562
Query: 188 CKDTETNTQKVLLYTTSNYHWYLKQTLLFRSNQRINKIIWDND----FDISNNKKMHIIL 243
+ ++ + Y + L + I+ W +D I K H+
Sbjct: 2563 ---PNRSLMACPVFQKNFYFFESVANLDSKHPTEIHNFGWSSDEIKGCQIDIFDKTHLFY 2619
Query: 244 QNGSYLIY 251
QNGS LI+
Sbjct: 2620 QNGSSLIF 2627
>AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical
protein F14F9.4 protein.
Length = 918
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 319 NSFFVITVDNKLLFYSQKEKHPLNYEAYN-SQQFDKSDFPFQYHHWLWVDSQTI 371
N + T+ L Y +K L +++Y Q ++P QY+H W +S+ +
Sbjct: 462 NRKIIETMKMSTLLYGRKTVPELLHDSYEWENQLVNMNWPNQYYHCTWANSEEL 515
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.134 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,021,073
Number of Sequences: 27539
Number of extensions: 644869
Number of successful extensions: 1497
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1475
Number of HSP's gapped (non-prelim): 26
length of query: 590
length of database: 12,573,161
effective HSP length: 85
effective length of query: 505
effective length of database: 10,232,346
effective search space: 5167334730
effective search space used: 5167334730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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