GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001536-TA|BGIBMGA001536-PA|IPR003010|Nitrilase/cyanide
hydratase and apolipoprotein N-acyltransferase
         (385 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   6.4  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   6.4  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 319 YVTAPDGSRTPGLSRIKDGLLIAQVDLNLC 348
           Y    DGS+   + R  +  L+  ++LN+C
Sbjct: 459 YTCVSDGSKLVSIQRKCNHGLVYDLELNIC 488


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 12/31 (38%), Positives = 14/31 (45%)

Query: 70  PRIVRLGLIQHSIAISTDNPITQQRLAIFEK 100
           P IVR  L +H        P T Q+L   EK
Sbjct: 102 PPIVRCALRKHKPNRKPRTPFTTQQLLALEK 132


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.136    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,806
Number of Sequences: 317
Number of extensions: 4103
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 2
length of query: 385
length of database: 114,650
effective HSP length: 58
effective length of query: 327
effective length of database: 96,264
effective search space: 31478328
effective search space used: 31478328
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)