Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001536-TA|BGIBMGA001536-PA|IPR003010|Nitrilase/cyanide
hydratase and apolipoprotein N-acyltransferase
(385 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC965.09 |||nitrilase |Schizosaccharomyces pombe|chr 3|||Manual 80 6e-16
SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr 1|||... 61 2e-10
SPBC651.02 |||nitrilase |Schizosaccharomyces pombe|chr 2|||Manual 43 8e-05
SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces pombe... 30 0.63
SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|... 28 2.6
SPAC644.04 |pct1||RNA 5'-triphosphatase|Schizosaccharomyces pomb... 28 2.6
SPAC30C2.03 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 2.6
SPBC660.13c |ssb1|rpa1, rad11|DNA replication factor A subunit S... 27 3.4
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 27 4.5
SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces pomb... 27 4.5
SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 27 4.5
SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr ... 26 7.8
>SPCC965.09 |||nitrilase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 272
Score = 79.8 bits (188), Expect = 6e-16
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 23/233 (9%)
Query: 140 AEPVLTGPSTVFLAELAVKYDMVIISPILERDDIHGDTIWNTAVVINEFGKVIGKHRKNH 199
AE GPS ++ LA KY + II E+++ + I+N+ + I E G + G +RK H
Sbjct: 61 AEIAGEGPSFKTMSNLAAKYHVNIIYGFPEKEEKQSNIIYNSCIYITENGNLGGVYRKVH 120
Query: 200 IPRVGDFNESTYYFEGNTGHPVFETKYGKVAINICYGRHHPLNWLMFGINGAEIVFNPSA 259
+ F+ +F+ + P+FET +GK+ + IC+ P + +NGA+++ +
Sbjct: 121 L-----FDTERKHFKKGSDFPIFETSFGKLGVMICWDTAFPEVARIHALNGADLLVVATN 175
Query: 260 TVSGLSEHLWAVEARNAAIANSYYTCAINRVGTESFPNEFTSGDGKPAHKDFGHFYGSSY 319
+ S+ W + + A N A NRVGT+ E S F+G S
Sbjct: 176 WENPYSDD-WDLVTKARAFENCIPLVAANRVGTD----EKLS------------FFGHSK 218
Query: 320 VTAPDGSRTPGLSRIKDGLLIAQVDLNLCRQI-KDKWGFTMTQRLDLYAQSLN 371
+ P G L K+G++ VDL+ + + K+ + F + DLY + L+
Sbjct: 219 IIGPTGKVIKALDEEKEGVISYTVDLDDAKPLRKNYYTFFEDRMPDLYKRLLS 271
>SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 322
Score = 61.3 bits (142), Expect = 2e-10
Identities = 75/307 (24%), Positives = 124/307 (40%), Gaps = 40/307 (13%)
Query: 71 RIVRLGLIQHSIAISTDNPITQQRLAIFEKVQKIISAAAAEQVNILCLQEAWNMPFAFCT 130
R R+GL+Q + + RL + E AA N++ L E +N P+
Sbjct: 42 RAFRIGLVQLANTKDKSENLQLARLKVLE--------AAKNGSNVIVLPEIFNSPYG--- 90
Query: 131 REKQPWCDFAEPVL-TGPSTVFLAELAVKYDMVIIS-PILERDDIHGDTIWNTAVVINEF 188
+ +AEP+ + PS L+ +A + I ER D ++NTA+V +
Sbjct: 91 --TGYFNQYAEPIEESSPSYQALSSMAKDTKTYLFGGSIPERKD---GKLYNTAMVFDPS 145
Query: 189 GKVIGKHRKNH-----IPRVGDFNESTYYFEGNTGHPVFETKYGKVAINICYGRHHPLNW 243
GK+I HRK H IP F ES G+ V +T+YGK + ICY P
Sbjct: 146 GKLIAVHRKIHLFDIDIPGGVSFRESDSLSPGDAMTMV-DTEYGKFGLGICYDIRFPELA 204
Query: 244 LMFGINGAEIVFNPSATVSGLSEHLWAVEARNAAIANSYYTCAINRVGTESFPNEFTSGD 303
++ NG ++ P A W + AR A+ N +
Sbjct: 205 MIAARNGCSVMIYPGAFNLSTGPLHWELLARARAVDNEMFVAC--------------CAP 250
Query: 304 GKPAHKDFGHFYGSSYVTAPDGSRTPGLSRIKDGLLIAQVDLNLCRQIKDKWGFTMTQRL 363
+ + D+ H +G S V P G + + K ++ A +D ++ ++ +R
Sbjct: 251 ARDMNADY-HSWGHSTVVDPFG-KVIATTDEKPSIVYADIDPSVMSTARNSVPIYTQRRF 308
Query: 364 DLYAQSL 370
D+Y++ L
Sbjct: 309 DVYSEVL 315
>SPBC651.02 |||nitrilase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 276
Score = 42.7 bits (96), Expect = 8e-05
Identities = 54/220 (24%), Positives = 85/220 (38%), Gaps = 24/220 (10%)
Query: 154 ELAVKYDMVIISPILERDDIHGDTIWNTAVVINEFGKVIGKHRKNHIPRVGDFN-----E 208
E A K+ + + + E + + ++ + G++I ++ K H+ V N E
Sbjct: 71 ESATKHSIFVNICVHEPSKVKNKLLNSSLFIEPLHGEIISRYSKAHLFDVEIKNGPTLKE 130
Query: 209 STYYFEGNTGHPVFETKYGKVAINICYGRHHPLNWLMFGINGAEIVFNPSATVSGLSEHL 268
S G P +T GKV IC+ P + GA I+ PSA
Sbjct: 131 SNTTLRGEAILPPCKTPLGKVGSAICFDIRFPEQAIKLRNMGAHIITYPSAFTEKTGAAH 190
Query: 269 WAVEARNAAIANSYYTCAINRVGTESFPNEFTSGDGKPAHKDFGHFYGSSYVTAPDGSRT 328
W V R A+ + Y A + GK H + YG S + P G+
Sbjct: 191 WEVLLRARALDSQCYVIA-------------PAQGGK--HNEKRASYGHSMIVDPWGTVI 235
Query: 329 PGLSRIK--DGLLIAQVDLNLCRQIKDKWGFTMTQRLDLY 366
S I +GL+ A +DLNL ++ + +R DLY
Sbjct: 236 AQYSDISSPNGLIFADLDLNLVDHVRTY--IPLLRRNDLY 273
>SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 29.9 bits (64), Expect = 0.63
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Query: 230 AINICYGRHHPLNWLMFGINGAEIVFNPSATVSGLSEHLWAVEARNAAIANSYYTCAINR 289
A+ CY +H W+ + + E+ NP T + L LW V+A I+ A N
Sbjct: 332 ALKACYRKH----WVQYILEQNELGRNPYNTTNVLRAILWLVKAWTTDISPEIIENAFNL 387
Query: 290 VGTESFPNE 298
G NE
Sbjct: 388 SGVLGLFNE 396
>SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1234
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 252 EIVFNPSATVSGLSEHLWAVEARNAAIA 279
EI+ +PS +S +S+H W + R+ I+
Sbjct: 374 EIMKHPSLLISAISQHFWVLALRDPIIS 401
>SPAC644.04 |pct1||RNA 5'-triphosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 320 VTAPDGSRTPGLSRIKD--GLLIAQVDLNLCRQIKDKWGFTMTQRLDLYAQSLNEAIKHD 377
V+ P G++ P L+R+KD G + ++ ++L + ++ + T+R +L + N A D
Sbjct: 212 VSMPSGNQQPSLTRLKDRVGYVHQEIKIDLTKTTQNDPVYDTTERHELEVEFGNIADLRD 271
>SPAC30C2.03 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 210
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 80 HSIAIS--TDNPITQQRLAIFEKVQKIISAAAAEQVNILCLQEAWNMPF 126
HSI++ + I+Q+ + I QK+ A + + + C+ AW +PF
Sbjct: 26 HSISLGYLSKEKISQEEMQIIRATQKL---ARTKYMTLYCIPRAWLIPF 71
>SPBC660.13c |ssb1|rpa1, rad11|DNA replication factor A subunit Ssb1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 609
Score = 27.5 bits (58), Expect = 3.4
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 10/66 (15%)
Query: 79 QHSIAISTDNPITQQRLAIFEKVQKIISAAAAEQVNIL----------CLQEAWNMPFAF 128
++ I I+ + Q L +F+ V K+I A+++N L C+ EA MP+ F
Sbjct: 508 RYIITIAVGDHTGQLWLNVFDDVGKLIMHKTADELNDLQENDENAFMNCMAEACYMPYIF 567
Query: 129 CTREKQ 134
R KQ
Sbjct: 568 QCRAKQ 573
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 12 VISNSLKGKELEEFNRIHYGR 32
V+ N+L K LE+ NRI YG+
Sbjct: 747 VLQNTLVAKNLEQANRIAYGK 767
>SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 414
Score = 27.1 bits (57), Expect = 4.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 170 RDDIHGDTIWNTAVVINEFGKVIGKHRKNHIPRVGDFNES 209
+D I TI N + I+ KV+G+ H VG F+ES
Sbjct: 168 KDVISCSTIENKIMAISFCRKVLGQTGDGHFSPVGGFSES 207
>SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 681
Score = 27.1 bits (57), Expect = 4.5
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 10/110 (9%)
Query: 6 LTSLDEVISNSLKGKELEEFNRIHYGRIDQCALF-ISSVAAQKAASNGFEIKAYDFPAR- 63
LT + + N + LE N H I L+ + +++ QK +SN E + PA
Sbjct: 530 LTLVQDAFGNYVLQYVLELNNPNHTEAIISYFLYKVRALSTQKFSSNVMEKCIFFAPAAI 589
Query: 64 --------KEECRKPRIVRLGLIQHSIAISTDNPITQQRLAIFEKVQKII 105
+E P+++R + I + DN +QR + E+++ +I
Sbjct: 590 KEKLISELMDEKHLPKLLRDSFANYVIQTALDNASVKQRAELVERIKPLI 639
>SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 384
Score = 26.2 bits (55), Expect = 7.8
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 146 GPSTVFLAELAVKYDMVIISPILERDDIHGDTIWNTAVVINEFGKVIGKHR----KNHIP 201
GP+ V + + ++ + P LER GD I N GK I K R +NH
Sbjct: 31 GPTAVVMMNMGGPSNLDEVGPFLERLFTDGDII-PLGYFQNSLGKFIAKRRTPKVQNHYS 89
Query: 202 RVG 204
+G
Sbjct: 90 DIG 92
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.136 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,841,933
Number of Sequences: 5004
Number of extensions: 79946
Number of successful extensions: 143
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 133
Number of HSP's gapped (non-prelim): 14
length of query: 385
length of database: 2,362,478
effective HSP length: 74
effective length of query: 311
effective length of database: 1,992,182
effective search space: 619568602
effective search space used: 619568602
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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