GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001536-TA|BGIBMGA001536-PA|IPR003010|Nitrilase/cyanide
hydratase and apolipoprotein N-acyltransferase
         (385 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    24   1.9  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   4.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   4.4  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   5.8  

>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 195 HRKNHIPRVGDFNESTYYFEGNTGHPVFETKYGKVAINICYGRHHPLNWLMFGI 248
           H K    +    N  +     NT     E +  K AI IC+   + L+W  +G+
Sbjct: 241 HEKALREQAKKMNVDSLRSNANTSSQSAEIRIAKAAITICF--LYVLSWTPYGV 292


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 12/56 (21%), Positives = 23/56 (41%)

Query: 178 IWNTAVVINEFGKVIGKHRKNHIPRVGDFNESTYYFEGNTGHPVFETKYGKVAINI 233
           I++T V    +G  +     N  PR   F+ + + +      P+ +  YG   + I
Sbjct: 177 IYHTLVAEQSYGLTLPSWTNNIFPRGELFDATVFTYNITNSTPLLKKLYGGPLLRI 232


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 12/56 (21%), Positives = 23/56 (41%)

Query: 178 IWNTAVVINEFGKVIGKHRKNHIPRVGDFNESTYYFEGNTGHPVFETKYGKVAINI 233
           I++T V    +G  +     N  PR   F+ + + +      P+ +  YG   + I
Sbjct: 192 IYHTLVAEQSYGLTLPSWTNNIFPRGELFDATVFTYNITNSTPLLKKLYGGPLLRI 247


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 304 GKPAHKDFGHFYGS 317
           G+P  KD+GH  GS
Sbjct: 426 GRPRAKDYGHSSGS 439


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.136    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,361
Number of Sequences: 429
Number of extensions: 4946
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 4
length of query: 385
length of database: 140,377
effective HSP length: 59
effective length of query: 326
effective length of database: 115,066
effective search space: 37511516
effective search space used: 37511516
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)