GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001535-TA|BGIBMGA001535-PA|undefined
         (200 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK098551-1|BAC05330.1|  250|Homo sapiens protein ( Homo sapiens ...    29   8.3  
AJ549812-1|CAD71147.1| 1363|Homo sapiens hypothetical protein pr...    29   8.3  

>AK098551-1|BAC05330.1|  250|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25685 fis, clone TST04219. ).
          Length = 250

 Score = 29.5 bits (63), Expect = 8.3
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 79  GLGDPAEDPRLKRS-DTDLSADPIMRPVPPEQKAIIYKDIPNFGRKVYLSKRSKIAPEAK 137
           GL D  +DP      D D++ DP   P  PE+ A+  K   N   K+  S  ++I     
Sbjct: 49  GLTDITKDPDFNEIYDEDVNEDPTYDPNSPEETAVFMKYAENIMLKLTFS-TTQIQQYEN 107

Query: 138 YYFNECSGWV 147
            +  E   W+
Sbjct: 108 VFIFETGYWL 117


>AJ549812-1|CAD71147.1| 1363|Homo sapiens hypothetical protein
           protein.
          Length = 1363

 Score = 29.5 bits (63), Expect = 8.3
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 79  GLGDPAEDPRLKRS-DTDLSADPIMRPVPPEQKAIIYKDIPNFGRKVYLSKRSKIAPEAK 137
           GL D  +DP      D D++ DP   P  PE+ A+  K   N   K+  S  ++I     
Sbjct: 130 GLTDITKDPDFNEIYDEDVNEDPTYDPNSPEETAVFMKYAENIMLKLTFS-TTQIQQYEN 188

Query: 138 YYFNECSGWV 147
            +  E   W+
Sbjct: 189 VFIFETGYWL 198


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.318    0.138    0.438 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,029,665
Number of Sequences: 224733
Number of extensions: 1595121
Number of successful extensions: 3099
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3099
Number of HSP's gapped (non-prelim): 2
length of query: 200
length of database: 73,234,838
effective HSP length: 86
effective length of query: 114
effective length of database: 53,907,800
effective search space: 6145489200
effective search space used: 6145489200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)