Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001535-TA|BGIBMGA001535-PA|undefined
(200 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF022980-2|AAG24188.3| 343|Caenorhabditis elegans Hypothetical ... 31 0.74
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 29 2.3
AL132951-5|CAC44307.1| 426|Caenorhabditis elegans Hypothetical ... 29 2.3
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 29 2.3
Z50016-13|CAL22699.1| 264|Caenorhabditis elegans Hypothetical p... 29 3.0
Z50016-6|CAC42350.1| 448|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical pr... 29 3.0
U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated p... 29 3.0
U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated p... 29 3.0
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 29 3.0
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 29 3.0
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 29 3.0
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 3.0
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 29 3.0
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 29 3.0
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 3.0
AF151645-1|AAD42387.1| 264|Caenorhabditis elegans ionotropic GA... 29 3.0
AF151644-1|AAD42386.1| 448|Caenorhabditis elegans ionotropic GA... 29 3.0
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 28 5.2
AL117203-18|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 28 5.2
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z68302-4|CAB54515.1| 521|Caenorhabditis elegans Hypothetical pr... 27 6.9
U67949-5|AAB07566.1| 705|Caenorhabditis elegans Hypothetical pr... 27 6.9
AC024202-5|AAP86609.1| 827|Caenorhabditis elegans C. elegans AP... 27 9.1
AC024202-3|AAF36038.2| 955|Caenorhabditis elegans C. elegans AP... 27 9.1
>AF022980-2|AAG24188.3| 343|Caenorhabditis elegans Hypothetical
protein T03D3.5 protein.
Length = 343
Score = 30.7 bits (66), Expect = 0.74
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 94 TDLSADPIMRPVPPEQKAIIYKDIPNFGRKVYLSKRSKIAPEAK----YYFNECSGWVYG 149
+D D + +P E++A K+ P +K YLSK K + + K +Y++E +G
Sbjct: 126 SDAVKDMFVANIPIEREARAMKNKPF--KKFYLSKMLKKSVDTKTLVDFYYSEKNGIGGN 183
Query: 150 WRLEDSFF 157
WRLE F
Sbjct: 184 WRLEHPDF 191
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 14 AATLNREPKDYFESDVLEN-VMIGGMATITRDHEVAGYNRRRKPIRDVKEIPGISFIKKG 72
AA L P Y +++ N + +GG T T + E+ + + ++DVK + + KG
Sbjct: 51 AAALIPAPPTY---ELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKG 107
Query: 73 NSIVDVGLGDPAEDPR 88
+ D AE+ R
Sbjct: 108 YGFITFETEDQAEEIR 123
>AL132951-5|CAC44307.1| 426|Caenorhabditis elegans Hypothetical
protein Y67H2A.6 protein.
Length = 426
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/36 (44%), Positives = 18/36 (50%)
Query: 23 DYFESDVLENVMIGGMATITRDHEVAGYNRRRKPIR 58
DYF+ + LEN M G I AG RRR P R
Sbjct: 338 DYFDDEDLENDMSGPRRKIHAADSPAGSRRRRVPPR 373
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 14 AATLNREPKDYFESDVLEN-VMIGGMATITRDHEVAGYNRRRKPIRDVKEIPGISFIKKG 72
AA L P Y +++ N + +GG T T + E+ + + ++DVK + + KG
Sbjct: 52 AAALIPAPPTY---ELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKG 108
Query: 73 NSIVDVGLGDPAEDPR 88
+ D AE+ R
Sbjct: 109 YGFITFETEDQAEEIR 124
>Z50016-13|CAL22699.1| 264|Caenorhabditis elegans Hypothetical
protein T21C12.1h protein.
Length = 264
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 34 MIGGMATITRDHEVAGYNRRRKPIRDVKEI 63
+IG M +T H + G NRR P+ VK +
Sbjct: 104 LIGTMTVLTETHLMTGTNRRLPPVAYVKAV 133
>Z50016-6|CAC42350.1| 448|Caenorhabditis elegans Hypothetical
protein T21C12.1f protein.
Length = 448
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 34 MIGGMATITRDHEVAGYNRRRKPIRDVKEI 63
+IG M +T H + G NRR P+ VK +
Sbjct: 288 LIGTMTVLTETHLMTGTNRRLPPVAYVKAV 317
>Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical
protein T21C12.1a protein.
Length = 1106
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 34 MIGGMATITRDHEVAGYNRRRKPIRDVKEI 63
+IG M +T H + G NRR P+ VK +
Sbjct: 946 LIGTMTVLTETHLMTGTNRRLPPVAYVKAV 975
>U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated
protein 44, isoform d protein.
Length = 795
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/73 (17%), Positives = 33/73 (45%)
Query: 28 DVLENVMIGGMATITRDHEVAGYNRRRKPIRDVKEIPGISFIKKGNSIVDVGLGDPAEDP 87
D++ ++ G + + +++R+PIR +E+P + +K+ D+ +P +
Sbjct: 555 DIVRSIAYGEPDALINYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPT 614
Query: 88 RLKRSDTDLSADP 100
T + +P
Sbjct: 615 HHVEQATTVVQEP 627
>U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated
protein 44, isoform b protein.
Length = 905
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/73 (17%), Positives = 33/73 (45%)
Query: 28 DVLENVMIGGMATITRDHEVAGYNRRRKPIRDVKEIPGISFIKKGNSIVDVGLGDPAEDP 87
D++ ++ G + + +++R+PIR +E+P + +K+ D+ +P +
Sbjct: 665 DIVRSIAYGEPDALINYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPT 724
Query: 88 RLKRSDTDLSADP 100
T + +P
Sbjct: 725 HHVEQATTVVQEP 737
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/73 (17%), Positives = 33/73 (45%)
Query: 28 DVLENVMIGGMATITRDHEVAGYNRRRKPIRDVKEIPGISFIKKGNSIVDVGLGDPAEDP 87
D++ ++ G + + +++R+PIR +E+P + +K+ D+ +P +
Sbjct: 1569 DIVRSIAYGEPDALINYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPT 1628
Query: 88 RLKRSDTDLSADP 100
T + +P
Sbjct: 1629 HHVEQATTVVQEP 1641
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/73 (17%), Positives = 33/73 (45%)
Query: 28 DVLENVMIGGMATITRDHEVAGYNRRRKPIRDVKEIPGISFIKKGNSIVDVGLGDPAEDP 87
D++ ++ G + + +++R+PIR +E+P + +K+ D+ +P +
Sbjct: 1569 DIVRSIAYGEPDALINYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPT 1628
Query: 88 RLKRSDTDLSADP 100
T + +P
Sbjct: 1629 HHVEQATTVVQEP 1641
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/73 (17%), Positives = 33/73 (45%)
Query: 28 DVLENVMIGGMATITRDHEVAGYNRRRKPIRDVKEIPGISFIKKGNSIVDVGLGDPAEDP 87
D++ ++ G + + +++R+PIR +E+P + +K+ D+ +P +
Sbjct: 1569 DIVRSIAYGEPDALINYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPT 1628
Query: 88 RLKRSDTDLSADP 100
T + +P
Sbjct: 1629 HHVEQATTVVQEP 1641
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/73 (17%), Positives = 33/73 (45%)
Query: 28 DVLENVMIGGMATITRDHEVAGYNRRRKPIRDVKEIPGISFIKKGNSIVDVGLGDPAEDP 87
D++ ++ G + + +++R+PIR +E+P + +K+ D+ +P +
Sbjct: 1575 DIVRSIAYGEPDALINYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPT 1634
Query: 88 RLKRSDTDLSADP 100
T + +P
Sbjct: 1635 HHVEQATTVVQEP 1647
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/73 (17%), Positives = 33/73 (45%)
Query: 28 DVLENVMIGGMATITRDHEVAGYNRRRKPIRDVKEIPGISFIKKGNSIVDVGLGDPAEDP 87
D++ ++ G + + +++R+PIR +E+P + +K+ D+ +P +
Sbjct: 1575 DIVRSIAYGEPDALINYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPT 1634
Query: 88 RLKRSDTDLSADP 100
T + +P
Sbjct: 1635 HHVEQATTVVQEP 1647
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/73 (17%), Positives = 33/73 (45%)
Query: 28 DVLENVMIGGMATITRDHEVAGYNRRRKPIRDVKEIPGISFIKKGNSIVDVGLGDPAEDP 87
D++ ++ G + + +++R+PIR +E+P + +K+ D+ +P +
Sbjct: 1569 DIVRSIAYGEPDALINYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPT 1628
Query: 88 RLKRSDTDLSADP 100
T + +P
Sbjct: 1629 HHVEQATTVVQEP 1641
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/73 (17%), Positives = 33/73 (45%)
Query: 28 DVLENVMIGGMATITRDHEVAGYNRRRKPIRDVKEIPGISFIKKGNSIVDVGLGDPAEDP 87
D++ ++ G + + +++R+PIR +E+P + +K+ D+ +P +
Sbjct: 1575 DIVRSIAYGEPDALINYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPT 1634
Query: 88 RLKRSDTDLSADP 100
T + +P
Sbjct: 1635 HHVEQATTVVQEP 1647
>AF151645-1|AAD42387.1| 264|Caenorhabditis elegans ionotropic GABA
receptor subunitUNC-49Cshort protein.
Length = 264
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 34 MIGGMATITRDHEVAGYNRRRKPIRDVKEI 63
+IG M +T H + G NRR P+ VK +
Sbjct: 104 LIGTMTVLTETHLMTGTNRRLPPVAYVKAV 133
>AF151644-1|AAD42386.1| 448|Caenorhabditis elegans ionotropic GABA
receptor subunitUNC-49C protein.
Length = 448
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 34 MIGGMATITRDHEVAGYNRRRKPIRDVKEI 63
+IG M +T H + G NRR P+ VK +
Sbjct: 288 LIGTMTVLTETHLMTGTNRRLPPVAYVKAV 317
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 27.9 bits (59), Expect = 5.2
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 13/93 (13%)
Query: 104 PVPPEQKAIIYKDIPNFGRKVYLSKRSKIAPE--AKYYFNECSGWVYGWRLEDSFFRRNP 161
PV PE +P + YLS+++K+A + Y NECS R D N
Sbjct: 2183 PVVPEPMDFGKIQLPERRTREYLSRKAKLAEKNYVHYLSNECS-----HRSHDVVV--NQ 2235
Query: 162 HRCGRVWRLTRDVKSR-TGPHPDPDHYKDSDPP 193
RC + T + R TG D D+Y + PP
Sbjct: 2236 FRC---FTGTHGERERGTGDVIDTDYYHPTRPP 2265
>AL117203-18|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 27.9 bits (59), Expect = 5.2
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 13/93 (13%)
Query: 104 PVPPEQKAIIYKDIPNFGRKVYLSKRSKIAPE--AKYYFNECSGWVYGWRLEDSFFRRNP 161
PV PE +P + YLS+++K+A + Y NECS R D N
Sbjct: 2183 PVVPEPMDFGKIQLPERRTREYLSRKAKLAEKNYVHYLSNECS-----HRSHDVVV--NQ 2235
Query: 162 HRCGRVWRLTRDVKSR-TGPHPDPDHYKDSDPP 193
RC + T + R TG D D+Y + PP
Sbjct: 2236 FRC---FTGTHGERERGTGDVIDTDYYHPTRPP 2265
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
protein H02I12.1 protein.
Length = 1319
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 166 RVWRLTRDVKSRTGPHPDPDHYKD 189
+V+ R K + GPH DPD Y D
Sbjct: 500 QVFPKNRHSKKQLGPHEDPDGYDD 523
>Z68302-4|CAB54515.1| 521|Caenorhabditis elegans Hypothetical
protein ZK792.8 protein.
Length = 521
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 162 HRCGRVWRLTRDVKSRTGPHPDPDHY 187
+R GR WR TR +S H D D +
Sbjct: 219 NRFGRDWRFTRRKRSHVAAHGDEDDF 244
>U67949-5|AAB07566.1| 705|Caenorhabditis elegans Hypothetical
protein F55A4.5 protein.
Length = 705
Score = 27.5 bits (58), Expect = 6.9
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 12 KKAATLNREPK-DYFESDVLENVMIGGMAT-ITRDHEVAGYNRRRKPIRDVKEIPGISFI 69
KK A +NREPK D + + G ++R +V + P ++ G+S
Sbjct: 384 KKLAAMNREPKRKTIVKDKKMDPLYGHQINPVSRLIQVTQAKSKEHPTFELVAEHGVSKY 443
Query: 70 KKGNSIVDVGLGDPAEDPR------LKRSDTDLSADPI--MRPVPPEQKAIIYKDI 117
K+ I+ V GD ++ + KR+ + + I ++P+PP K+++ K I
Sbjct: 444 KE--FIIQVKYGDDVQEGKGPNKRLAKRAAAEAMLESIGFVKPLPPPGKSLLKKMI 497
>AC024202-5|AAP86609.1| 827|Caenorhabditis elegans C. elegans APB-1
protein, isoform c protein.
Length = 827
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 20 EPKDYFESDVLENVM--IGGMATITRDHEVAGYNRRRKPIRDVKEIPGISFIKKGNSIVD 77
E D E +LE ++ IG +A++ A + + P+R + IP F G+S++D
Sbjct: 547 EETDLLEPSLLEQLVCHIGTLASVYHKPPSAFIDPAKAPLRQINPIPAAKF---GSSLLD 603
>AC024202-3|AAF36038.2| 955|Caenorhabditis elegans C. elegans APB-1
protein, isoform a protein.
Length = 955
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 20 EPKDYFESDVLENVM--IGGMATITRDHEVAGYNRRRKPIRDVKEIPGISFIKKGNSIVD 77
E D E +LE ++ IG +A++ A + + P+R + IP F G+S++D
Sbjct: 547 EETDLLEPSLLEQLVCHIGTLASVYHKPPSAFIDPAKAPLRQINPIPAAKF---GSSLLD 603
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.138 0.438
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,004,877
Number of Sequences: 27539
Number of extensions: 267173
Number of successful extensions: 565
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 546
Number of HSP's gapped (non-prelim): 25
length of query: 200
length of database: 12,573,161
effective HSP length: 78
effective length of query: 122
effective length of database: 10,425,119
effective search space: 1271864518
effective search space used: 1271864518
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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