GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001534-TA|BGIBMGA001534-PA|IPR001522|Fatty acid
desaturase, type 1, IPR005804|Fatty acid desaturase
         (160 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_25798| Best HMM Match : FA_desaturase (HMM E-Value=0)              102   2e-22
SB_54614| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-38)         27   7.3  
SB_44279| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.6  
SB_32653| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.6  
SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20)                     27   9.6  
SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.6  

>SB_25798| Best HMM Match : FA_desaturase (HMM E-Value=0)
          Length = 268

 Score =  102 bits (244), Expect = 2e-22
 Identities = 39/66 (59%), Positives = 53/66 (80%)

Query: 3   NSLYQWVRDHRIHHKFSDTDADPHNANRGLFFSHIGWLMMKKNNEVILRGKQIDMSDIEN 62
           N +++W RDHR+HHK+S+TDADPHNA RG FFSH+GWLM +K+ +VI +GK ID+SD+  
Sbjct: 53  NDIFEWSRDHRVHHKYSETDADPHNAKRGFFFSHVGWLMQRKHPDVIRKGKGIDLSDLYA 112

Query: 63  DPFLRF 68
           D  + F
Sbjct: 113 DSVVMF 118



 Score = 69.3 bits (162), Expect = 1e-12
 Identities = 33/77 (42%), Positives = 42/77 (54%)

Query: 69  YDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKAAEHFDFFNFGTKFIKLFEKIGWAYD 128
           YD  I PAEN FV++ T GEG+HNYHH FP DY A+E     N  T+ I ++  +G   D
Sbjct: 180 YDVTINPAENLFVTLATSGEGYHNYHHTFPQDYAASEFGTRLNMSTRLIDMWAAMGLVSD 239

Query: 129 LKEATPEMINAIAKKLG 145
            K    E I     + G
Sbjct: 240 RKVVPKETIRKRMMRTG 256


>SB_54614| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-38)
          Length = 1935

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 20   DTDADPHNANRGLFFSHIGWLMMKKNNEVILRGKQIDMSDIENDPFLRFYDKNIVPAENR 79
            D D DPH   R L    + W +        +  K+   +       L F   +I+PA+  
Sbjct: 1221 DLDFDPHLTEREL---GVQWNVNSDTFSFKINQKEKPTNRRVQSTILGFVSPSILPAKAI 1277

Query: 80   FVSICTLGEGW 90
               +C  G GW
Sbjct: 1278 LQDLCRQGLGW 1288


>SB_44279| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 244

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 8/21 (38%), Positives = 15/21 (71%)

Query: 111 NFGTKFIKLFEKIGWAYDLKE 131
           +FG +F+ LF  + W Y+++E
Sbjct: 205 HFGHRFMALFRGLAWQYEIEE 225


>SB_32653| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 477

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 9/67 (13%)

Query: 30 RGLFFSHIGWLMMKKNNEVILRGKQIDMSDIENDPFLRFYDKNI-----VPAENRFVSIC 84
          R L    + W+   +++  + + K +    + + P LRFYD N+     V A    +  C
Sbjct: 9  RTLLKKEVAWVWYPEHDAALTKLKSV----LTSKPVLRFYDTNLPTTLQVDASKSGLGAC 64

Query: 85 TLGEGWH 91
           L  G H
Sbjct: 65 LLQNGQH 71


>SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20)
          Length = 2232

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 102  KAAEHFDFFNFGTKFIKLFEKIGWAYDLKEAT-PEMINAI 140
            K   H D   +    I +  K GWA  LK+ T P+++ A+
Sbjct: 1422 KLKSHNDGHKYILTVIDVLSKYGWAIPLKDKTGPQIVQAL 1461


>SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 592

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 77  ENRFVSICTLGEGWHNYHHAFP 98
           + R +S C L  GWH+ +  FP
Sbjct: 257 DERDISGCVLENGWHHLNELFP 278


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.325    0.141    0.461 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,951,096
Number of Sequences: 59808
Number of extensions: 246014
Number of successful extensions: 513
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 509
Number of HSP's gapped (non-prelim): 7
length of query: 160
length of database: 16,821,457
effective HSP length: 77
effective length of query: 83
effective length of database: 12,216,241
effective search space: 1013948003
effective search space used: 1013948003
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 56 (26.6 bits)