GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001534-TA|BGIBMGA001534-PA|IPR001522|Fatty acid
desaturase, type 1, IPR005804|Fatty acid desaturase
         (160 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    27   0.21 
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    26   0.50 
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    25   0.87 
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   1.1  

>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative
          translation initiation factor protein.
          Length = 348

 Score = 27.5 bits (58), Expect = 0.21
 Identities = 8/29 (27%), Positives = 19/29 (65%)

Query: 66 LRFYDKNIVPAENRFVSICTLGEGWHNYH 94
          L+  D+ ++PAE++++ +  + +GW   H
Sbjct: 13 LQILDQLLLPAESKYIPVAGVKDGWSAIH 41


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 26.2 bits (55), Expect = 0.50
 Identities = 15/50 (30%), Positives = 21/50 (42%)

Query: 101 YKAAEHFDFFNFGTKFIKLFEKIGWAYDLKEATPEMINAIAKKLGDGTPV 150
           Y+     D   FG  ++ L   +G     KE  PE +N I  +L    PV
Sbjct: 334 YRLVNMSDIILFGEVYVILKRMVGGNRVPKELDPEKLNTIIDELFPSHPV 383


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 25.4 bits (53), Expect = 0.87
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 63  DPFLRFYDKNIVPAENRFVSICTLGEGW 90
           D  +R +  N  PA    VSI T G GW
Sbjct: 276 DGQVRLWLTNNAPASKLIVSIPTFGRGW 303


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 92   NYHHAFPFDYKAAEHFDFFNFGTKFIKLFEKIGWAYDLKEATPEMINAIAKKLGDGTPVH 151
            N    F F+ +  E F   +   K+ + FE  G+AY++ +   + +  +A  L  G P H
Sbjct: 1042 NGERFFAFNNQTIEQFP--SLVKKYFEDFED-GFAYNMTKFYQQNVVTMAFPLATGLPFH 1098

Query: 152  FPI 154
            + +
Sbjct: 1099 YSL 1101



 Score = 24.6 bits (51), Expect = 1.5
 Identities = 7/18 (38%), Positives = 13/18 (72%)

Query: 94   HHAFPFDYKAAEHFDFFN 111
            H+ F  D++ A +FD++N
Sbjct: 1592 HNQFQIDFQLAPYFDYYN 1609


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.325    0.141    0.461 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,953
Number of Sequences: 2123
Number of extensions: 8323
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 6
length of query: 160
length of database: 516,269
effective HSP length: 59
effective length of query: 101
effective length of database: 391,012
effective search space: 39492212
effective search space used: 39492212
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)