Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001534-TA|BGIBMGA001534-PA|IPR001522|Fatty acid
desaturase, type 1, IPR005804|Fatty acid desaturase
(160 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC073413-1|AAY40977.1| 256|Homo sapiens unknown protein. 103 3e-22
AK024685-1|BAB14961.1| 256|Homo sapiens protein ( Homo sapiens ... 98 1e-20
AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase pro... 95 7e-20
Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase p... 94 2e-19
S70284-1|AAB30631.1| 237|Homo sapiens stearoyl-CoA desaturase p... 94 2e-19
BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase... 94 2e-19
BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein. 94 2e-19
AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase... 94 2e-19
AL139819-3|CAH72823.1| 242|Homo sapiens stearoyl-CoA desaturase... 94 2e-19
AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase... 94 2e-19
AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase... 94 2e-19
AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase... 94 2e-19
AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase... 94 2e-19
BC048971-1|AAH48971.1| 134|Homo sapiens SCD5 protein protein. 77 2e-14
AL831891-1|CAD38567.1| 160|Homo sapiens hypothetical protein pr... 77 2e-14
AL096713-1|CAB46370.1| 1430|Homo sapiens hypothetical protein pr... 31 1.8
AF183187-1|AAG17468.1| 1230|Homo sapiens heart/fetal otoferlin p... 30 4.2
AF183186-1|AAG12992.1| 1307|Homo sapiens brain otoferlin short i... 30 4.2
AF183185-1|AAG12991.1| 1997|Homo sapiens brain otoferlin long is... 30 4.2
AF107403-1|AAD26117.1| 1230|Homo sapiens otoferlin protein. 30 4.2
AC093378-2|AAY15083.1| 1230|Homo sapiens unknown protein. 30 4.2
BC052617-1|AAH52617.1| 1577|Homo sapiens FER1L3 protein protein. 29 7.4
AL365364-3|CAI41207.2| 2048|Homo sapiens fer-1-like 3, myoferlin... 29 7.4
AL365364-2|CAI41206.2| 2061|Homo sapiens fer-1-like 3, myoferlin... 29 7.4
AL360229-3|CAH72372.2| 2061|Homo sapiens fer-1-like 3, myoferlin... 29 7.4
AL360229-2|CAH72371.2| 2048|Homo sapiens fer-1-like 3, myoferlin... 29 7.4
AF207990-1|AAG23737.1| 2048|Homo sapiens fer-1 like protein 3 pr... 29 7.4
AF182317-1|AAF27177.1| 2018|Homo sapiens myoferlin protein. 29 7.4
AF182316-1|AAF27176.1| 2061|Homo sapiens myoferlin protein. 29 7.4
AB033033-1|BAA86521.2| 2061|Homo sapiens KIAA1207 protein protein. 29 7.4
>AC073413-1|AAY40977.1| 256|Homo sapiens unknown protein.
Length = 256
Score = 103 bits (247), Expect = 3e-22
Identities = 43/96 (44%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 3 NSLYQWVRDHRIHHKFSDTDADPHNANRGLFFSHIGWLMMKKNNEVILRGKQIDMSDIEN 62
N +++W RDHR HHK+S+TDADPHNA RG FFSHIGWL ++K+ +VI +G+++D++D+
Sbjct: 122 NDIFEWSRDHRAHHKYSETDADPHNARRGFFFSHIGWLFVRKHRDVIEKGRKLDVTDLLA 181
Query: 63 DPFLRFY-DKNIVPAENRFV---SICTLGEGWHNYH 94
DP +R + + E R + + C + WH H
Sbjct: 182 DPVVRIQRNTQHIQKEGRALNQEAACEMLREWHQGH 217
>AK024685-1|BAB14961.1| 256|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21032 fis, clone CAE07365. ).
Length = 256
Score = 97.9 bits (233), Expect = 1e-20
Identities = 42/96 (43%), Positives = 64/96 (66%), Gaps = 4/96 (4%)
Query: 3 NSLYQWVRDHRIHHKFSDTDADPHNANRGLFFSHIGWLMMKKNNEVILRGKQIDMSDIEN 62
N +++ RDHR HHK+S+TDADPHNA RG FFSHIGWL ++K+ +VI +G+++D++D+
Sbjct: 122 NDIFERSRDHRAHHKYSETDADPHNARRGFFFSHIGWLFVRKHRDVIEKGRKLDVTDLLA 181
Query: 63 DPFLRFY-DKNIVPAENRFV---SICTLGEGWHNYH 94
DP +R + + E R + + C + WH H
Sbjct: 182 DPVVRIQRNTQHIQKEGRALNQEAACEMLREWHQGH 217
>AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase
protein.
Length = 330
Score = 95.5 bits (227), Expect = 7e-20
Identities = 37/69 (53%), Positives = 54/69 (78%)
Query: 3 NSLYQWVRDHRIHHKFSDTDADPHNANRGLFFSHIGWLMMKKNNEVILRGKQIDMSDIEN 62
N +++ RDHR HHK+S+TDADPHNA RG FFSHIGWL ++K+ +VI +G+++D++D+
Sbjct: 122 NDIFERSRDHRAHHKYSETDADPHNARRGFFFSHIGWLFVRKHRDVIEKGRKLDVTDLLA 181
Query: 63 DPFLRFYDK 71
DP +R K
Sbjct: 182 DPVVRIQRK 190
Score = 77.4 bits (182), Expect = 2e-14
Identities = 39/82 (47%), Positives = 49/82 (59%)
Query: 67 RFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKAAEHFDFFNFGTKFIKLFEKIGWA 126
R YDK+I P +N V++ +GEG+HNYHH FPFDY A+E FN T FI +G A
Sbjct: 248 RPYDKHISPRQNPLVALGAIGEGFHNYHHTFPFDYSASEFGLNFNPTTWFIDFMCWLGLA 307
Query: 127 YDLKEATPEMINAIAKKLGDGT 148
D K AT MI A + GD +
Sbjct: 308 TDRKRATKPMIEARKARTGDSS 329
>Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase
protein.
Length = 359
Score = 94.3 bits (224), Expect = 2e-19
Identities = 36/73 (49%), Positives = 52/73 (71%)
Query: 3 NSLYQWVRDHRIHHKFSDTDADPHNANRGLFFSHIGWLMMKKNNEVILRGKQIDMSDIEN 62
N +Y+W RDHR HHKFS+T ADPHN+ RG FFSH+GWL+++K+ V +G +D+SD+E
Sbjct: 148 NDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEA 207
Query: 63 DPFLRFYDKNIVP 75
+ + F + P
Sbjct: 208 EKLVMFQRRYYKP 220
Score = 85.8 bits (203), Expect = 6e-17
Identities = 40/81 (49%), Positives = 51/81 (62%)
Query: 67 RFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKAAEHFDFFNFGTKFIKLFEKIGWA 126
R YDKNI P EN VS+ +GEG+HNYHH+FP+DY A+E+ NF T FI +G
Sbjct: 274 RPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEYRWHINFNTFFIDWMAALGLT 333
Query: 127 YDLKEATPEMINAIAKKLGDG 147
YD K+ + I A K+ GDG
Sbjct: 334 YDRKKVSKAAILARIKRTGDG 354
>S70284-1|AAB30631.1| 237|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 237
Score = 94.3 bits (224), Expect = 2e-19
Identities = 36/73 (49%), Positives = 52/73 (71%)
Query: 3 NSLYQWVRDHRIHHKFSDTDADPHNANRGLFFSHIGWLMMKKNNEVILRGKQIDMSDIEN 62
N +Y+W RDHR HHKFS+T ADPHN+ RG FFSH+GWL+++K+ V +G +D+SD+E
Sbjct: 146 NDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEA 205
Query: 63 DPFLRFYDKNIVP 75
+ + F + P
Sbjct: 206 EKLVMFQRRYYKP 218
>BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 94.3 bits (224), Expect = 2e-19
Identities = 36/73 (49%), Positives = 52/73 (71%)
Query: 3 NSLYQWVRDHRIHHKFSDTDADPHNANRGLFFSHIGWLMMKKNNEVILRGKQIDMSDIEN 62
N +Y+W RDHR HHKFS+T ADPHN+ RG FFSH+GWL+++K+ V +G +D+SD+E
Sbjct: 148 NDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEA 207
Query: 63 DPFLRFYDKNIVP 75
+ + F + P
Sbjct: 208 EKLVMFQRRYYKP 220
Score = 87.0 bits (206), Expect = 3e-17
Identities = 41/81 (50%), Positives = 52/81 (64%)
Query: 67 RFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKAAEHFDFFNFGTKFIKLFEKIGWA 126
R YDKNI P EN VS+ +GEG+HNYHH+FP+DY A+E+ NF T FI +G A
Sbjct: 274 RPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEYRWHINFTTFFIDCMAALGLA 333
Query: 127 YDLKEATPEMINAIAKKLGDG 147
YD K+ + I A K+ GDG
Sbjct: 334 YDRKKVSKAAILARIKRTGDG 354
>BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein.
Length = 355
Score = 94.3 bits (224), Expect = 2e-19
Identities = 36/73 (49%), Positives = 52/73 (71%)
Query: 3 NSLYQWVRDHRIHHKFSDTDADPHNANRGLFFSHIGWLMMKKNNEVILRGKQIDMSDIEN 62
N +Y+W RDHR HHKFS+T ADPHN+ RG FFSH+GWL+++K+ V +G +D+SD+E
Sbjct: 148 NDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEA 207
Query: 63 DPFLRFYDKNIVP 75
+ + F + P
Sbjct: 208 EKLVMFQRRYYKP 220
Score = 87.0 bits (206), Expect = 3e-17
Identities = 41/81 (50%), Positives = 52/81 (64%)
Query: 67 RFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKAAEHFDFFNFGTKFIKLFEKIGWA 126
R YDKNI P EN VS+ +GEG+HNYHH+FP+DY A+E+ NF T FI +G A
Sbjct: 274 RPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEYRWHINFTTFFIDCMAALGLA 333
Query: 127 YDLKEATPEMINAIAKKLGDG 147
YD K+ + I A K+ GDG
Sbjct: 334 YDRKKVSKAAILARIKRTGDG 354
>AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 94.3 bits (224), Expect = 2e-19
Identities = 36/73 (49%), Positives = 52/73 (71%)
Query: 3 NSLYQWVRDHRIHHKFSDTDADPHNANRGLFFSHIGWLMMKKNNEVILRGKQIDMSDIEN 62
N +Y+W RDHR HHKFS+T ADPHN+ RG FFSH+GWL+++K+ V +G +D+SD+E
Sbjct: 148 NDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEA 207
Query: 63 DPFLRFYDKNIVP 75
+ + F + P
Sbjct: 208 EKLVMFQRRYYKP 220
Score = 87.0 bits (206), Expect = 3e-17
Identities = 41/81 (50%), Positives = 52/81 (64%)
Query: 67 RFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKAAEHFDFFNFGTKFIKLFEKIGWA 126
R YDKNI P EN VS+ +GEG+HNYHH+FP+DY A+E+ NF T FI +G A
Sbjct: 274 RPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEYRWHINFTTFFIDCMAALGLA 333
Query: 127 YDLKEATPEMINAIAKKLGDG 147
YD K+ + I A K+ GDG
Sbjct: 334 YDRKKVSKAAILARIKRTGDG 354
>AL139819-3|CAH72823.1| 242|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 242
Score = 94.3 bits (224), Expect = 2e-19
Identities = 36/73 (49%), Positives = 52/73 (71%)
Query: 3 NSLYQWVRDHRIHHKFSDTDADPHNANRGLFFSHIGWLMMKKNNEVILRGKQIDMSDIEN 62
N +Y+W RDHR HHKFS+T ADPHN+ RG FFSH+GWL+++K+ V +G +D+SD+E
Sbjct: 148 NDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEA 207
Query: 63 DPFLRFYDKNIVP 75
+ + F + P
Sbjct: 208 EKLVMFQRRYYKP 220
>AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 359
Score = 94.3 bits (224), Expect = 2e-19
Identities = 36/73 (49%), Positives = 52/73 (71%)
Query: 3 NSLYQWVRDHRIHHKFSDTDADPHNANRGLFFSHIGWLMMKKNNEVILRGKQIDMSDIEN 62
N +Y+W RDHR HHKFS+T ADPHN+ RG FFSH+GWL+++K+ V +G +D+SD+E
Sbjct: 148 NDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEA 207
Query: 63 DPFLRFYDKNIVP 75
+ + F + P
Sbjct: 208 EKLVMFQRRYYKP 220
Score = 87.0 bits (206), Expect = 3e-17
Identities = 41/81 (50%), Positives = 52/81 (64%)
Query: 67 RFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKAAEHFDFFNFGTKFIKLFEKIGWA 126
R YDKNI P EN VS+ +GEG+HNYHH+FP+DY A+E+ NF T FI +G A
Sbjct: 274 RPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEYRWHINFTTFFIDCMAALGLA 333
Query: 127 YDLKEATPEMINAIAKKLGDG 147
YD K+ + I A K+ GDG
Sbjct: 334 YDRKKVSKAAILARIKRTGDG 354
>AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 94.3 bits (224), Expect = 2e-19
Identities = 36/73 (49%), Positives = 52/73 (71%)
Query: 3 NSLYQWVRDHRIHHKFSDTDADPHNANRGLFFSHIGWLMMKKNNEVILRGKQIDMSDIEN 62
N +Y+W RDHR HHKFS+T ADPHN+ RG FFSH+GWL+++K+ V +G +D+SD+E
Sbjct: 148 NDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEA 207
Query: 63 DPFLRFYDKNIVP 75
+ + F + P
Sbjct: 208 EKLVMFQRRYYKP 220
Score = 87.0 bits (206), Expect = 3e-17
Identities = 41/81 (50%), Positives = 52/81 (64%)
Query: 67 RFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKAAEHFDFFNFGTKFIKLFEKIGWA 126
R YDKNI P EN VS+ +GEG+HNYHH+FP+DY A+E+ NF T FI +G A
Sbjct: 274 RPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEYRWHINFTTFFIDCMAALGLA 333
Query: 127 YDLKEATPEMINAIAKKLGDG 147
YD K+ + I A K+ GDG
Sbjct: 334 YDRKKVSKAAILARIKRTGDG 354
>AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 366
Score = 94.3 bits (224), Expect = 2e-19
Identities = 36/73 (49%), Positives = 52/73 (71%)
Query: 3 NSLYQWVRDHRIHHKFSDTDADPHNANRGLFFSHIGWLMMKKNNEVILRGKQIDMSDIEN 62
N +Y+W RDHR HHKFS+T ADPHN+ RG FFSH+GWL+++K+ V +G +D+SD+E
Sbjct: 155 NDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEA 214
Query: 63 DPFLRFYDKNIVP 75
+ + F + P
Sbjct: 215 EKLVMFQRRYYKP 227
Score = 87.0 bits (206), Expect = 3e-17
Identities = 41/81 (50%), Positives = 52/81 (64%)
Query: 67 RFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKAAEHFDFFNFGTKFIKLFEKIGWA 126
R YDKNI P EN VS+ +GEG+HNYHH+FP+DY A+E+ NF T FI +G A
Sbjct: 281 RPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEYRWHINFTTFFIDCMAALGLA 340
Query: 127 YDLKEATPEMINAIAKKLGDG 147
YD K+ + I A K+ GDG
Sbjct: 341 YDRKKVSKAAILARIKRTGDG 361
>AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 94.3 bits (224), Expect = 2e-19
Identities = 36/73 (49%), Positives = 52/73 (71%)
Query: 3 NSLYQWVRDHRIHHKFSDTDADPHNANRGLFFSHIGWLMMKKNNEVILRGKQIDMSDIEN 62
N +Y+W RDHR HHKFS+T ADPHN+ RG FFSH+GWL+++K+ V +G +D+SD+E
Sbjct: 148 NDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEA 207
Query: 63 DPFLRFYDKNIVP 75
+ + F + P
Sbjct: 208 EKLVMFQRRYYKP 220
Score = 87.0 bits (206), Expect = 3e-17
Identities = 41/81 (50%), Positives = 52/81 (64%)
Query: 67 RFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKAAEHFDFFNFGTKFIKLFEKIGWA 126
R YDKNI P EN VS+ +GEG+HNYHH+FP+DY A+E+ NF T FI +G A
Sbjct: 274 RPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEYRWHINFTTFFIDCMAALGLA 333
Query: 127 YDLKEATPEMINAIAKKLGDG 147
YD K+ + I A K+ GDG
Sbjct: 334 YDRKKVSKAAILARIKRTGDG 354
>BC048971-1|AAH48971.1| 134|Homo sapiens SCD5 protein protein.
Length = 134
Score = 77.4 bits (182), Expect = 2e-14
Identities = 39/82 (47%), Positives = 49/82 (59%)
Query: 67 RFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKAAEHFDFFNFGTKFIKLFEKIGWA 126
R YDK+I P +N V++ +GEG+HNYHH FPFDY A+E FN T FI +G A
Sbjct: 52 RPYDKHISPRQNPLVALGAIGEGFHNYHHTFPFDYSASEFGLNFNPTTWFIDFMCWLGLA 111
Query: 127 YDLKEATPEMINAIAKKLGDGT 148
D K AT MI A + GD +
Sbjct: 112 TDRKRATKPMIEARKARTGDSS 133
>AL831891-1|CAD38567.1| 160|Homo sapiens hypothetical protein
protein.
Length = 160
Score = 77.4 bits (182), Expect = 2e-14
Identities = 39/82 (47%), Positives = 49/82 (59%)
Query: 67 RFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKAAEHFDFFNFGTKFIKLFEKIGWA 126
R YDK+I P +N V++ +GEG+HNYHH FPFDY A+E FN T FI +G A
Sbjct: 78 RPYDKHISPRQNPLVALGAIGEGFHNYHHTFPFDYSASEFGLNFNPTTWFIDFMCWLGLA 137
Query: 127 YDLKEATPEMINAIAKKLGDGT 148
D K AT MI A + GD +
Sbjct: 138 TDRKRATKPMIEARKARTGDSS 159
>AL096713-1|CAB46370.1| 1430|Homo sapiens hypothetical protein
protein.
Length = 1430
Score = 31.1 bits (67), Expect = 1.8
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 47 EVILRGKQI---DMSDIENDPFLRFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKA 103
+VIL K I +MSDI ++ ++N + R+ S+ GEG N+ FPFDY
Sbjct: 1168 DVILDEKSITGEEMSDIYVKGWIPGNEENKQKTDVRYRSLD--GEGNFNWRFVFPFDYLP 1225
Query: 104 AE 105
AE
Sbjct: 1226 AE 1227
>AF183187-1|AAG17468.1| 1230|Homo sapiens heart/fetal otoferlin
protein.
Length = 1230
Score = 29.9 bits (64), Expect = 4.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 87 GEGWHNYHHAFPFDYKAAE 105
GEG N+ + FPFDY AAE
Sbjct: 1018 GEGNFNWRYLFPFDYLAAE 1036
>AF183186-1|AAG12992.1| 1307|Homo sapiens brain otoferlin short
isoform protein.
Length = 1307
Score = 29.9 bits (64), Expect = 4.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 87 GEGWHNYHHAFPFDYKAAE 105
GEG N+ + FPFDY AAE
Sbjct: 1095 GEGNFNWRYLFPFDYLAAE 1113
>AF183185-1|AAG12991.1| 1997|Homo sapiens brain otoferlin long isoform
protein.
Length = 1997
Score = 29.9 bits (64), Expect = 4.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 87 GEGWHNYHHAFPFDYKAAE 105
GEG N+ + FPFDY AAE
Sbjct: 1785 GEGNFNWRYLFPFDYLAAE 1803
>AF107403-1|AAD26117.1| 1230|Homo sapiens otoferlin protein.
Length = 1230
Score = 29.9 bits (64), Expect = 4.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 87 GEGWHNYHHAFPFDYKAAE 105
GEG N+ + FPFDY AAE
Sbjct: 1018 GEGNFNWRYLFPFDYLAAE 1036
>AC093378-2|AAY15083.1| 1230|Homo sapiens unknown protein.
Length = 1230
Score = 29.9 bits (64), Expect = 4.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 87 GEGWHNYHHAFPFDYKAAE 105
GEG N+ + FPFDY AAE
Sbjct: 1018 GEGNFNWRYLFPFDYLAAE 1036
>BC052617-1|AAH52617.1| 1577|Homo sapiens FER1L3 protein protein.
Length = 1577
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 47 EVILRGKQI---DMSDIENDPFLRFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKA 103
+VIL K I +MSDI ++ ++N + + S+ GEG N+ FPFDY
Sbjct: 1315 DVILDEKSITGEEMSDIYVKGWIPGNEENKQKTDVHYRSLD--GEGNFNWRFVFPFDYLP 1372
Query: 104 AE 105
AE
Sbjct: 1373 AE 1374
>AL365364-3|CAI41207.2| 2048|Homo sapiens fer-1-like 3, myoferlin (C.
elegans) protein.
Length = 2048
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 47 EVILRGKQI---DMSDIENDPFLRFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKA 103
+VIL K I +MSDI ++ ++N + + S+ GEG N+ FPFDY
Sbjct: 1786 DVILDEKSITGEEMSDIYVKGWIPGNEENKQKTDVHYRSLD--GEGNFNWRFVFPFDYLP 1843
Query: 104 AE 105
AE
Sbjct: 1844 AE 1845
>AL365364-2|CAI41206.2| 2061|Homo sapiens fer-1-like 3, myoferlin (C.
elegans) protein.
Length = 2061
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 47 EVILRGKQI---DMSDIENDPFLRFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKA 103
+VIL K I +MSDI ++ ++N + + S+ GEG N+ FPFDY
Sbjct: 1799 DVILDEKSITGEEMSDIYVKGWIPGNEENKQKTDVHYRSLD--GEGNFNWRFVFPFDYLP 1856
Query: 104 AE 105
AE
Sbjct: 1857 AE 1858
>AL360229-3|CAH72372.2| 2061|Homo sapiens fer-1-like 3, myoferlin (C.
elegans) protein.
Length = 2061
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 47 EVILRGKQI---DMSDIENDPFLRFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKA 103
+VIL K I +MSDI ++ ++N + + S+ GEG N+ FPFDY
Sbjct: 1799 DVILDEKSITGEEMSDIYVKGWIPGNEENKQKTDVHYRSLD--GEGNFNWRFVFPFDYLP 1856
Query: 104 AE 105
AE
Sbjct: 1857 AE 1858
>AL360229-2|CAH72371.2| 2048|Homo sapiens fer-1-like 3, myoferlin (C.
elegans) protein.
Length = 2048
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 47 EVILRGKQI---DMSDIENDPFLRFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKA 103
+VIL K I +MSDI ++ ++N + + S+ GEG N+ FPFDY
Sbjct: 1786 DVILDEKSITGEEMSDIYVKGWIPGNEENKQKTDVHYRSLD--GEGNFNWRFVFPFDYLP 1843
Query: 104 AE 105
AE
Sbjct: 1844 AE 1845
>AF207990-1|AAG23737.1| 2048|Homo sapiens fer-1 like protein 3
protein.
Length = 2048
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 47 EVILRGKQI---DMSDIENDPFLRFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKA 103
+VIL K I +MSDI ++ ++N + + S+ GEG N+ FPFDY
Sbjct: 1786 DVILDEKSITGEEMSDIYVKGWIPGNEENKQKTDVHYRSLD--GEGNFNWRFVFPFDYLP 1843
Query: 104 AE 105
AE
Sbjct: 1844 AE 1845
>AF182317-1|AAF27177.1| 2018|Homo sapiens myoferlin protein.
Length = 2018
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 47 EVILRGKQI---DMSDIENDPFLRFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKA 103
+VIL K I +MSDI ++ ++N + + S+ GEG N+ FPFDY
Sbjct: 1757 DVILDEKSITGEEMSDIYVKGWIPGNEENKQKTDVHYRSLD--GEGNFNWRFVFPFDYLP 1814
Query: 104 AE 105
AE
Sbjct: 1815 AE 1816
>AF182316-1|AAF27176.1| 2061|Homo sapiens myoferlin protein.
Length = 2061
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 47 EVILRGKQI---DMSDIENDPFLRFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKA 103
+VIL K I +MSDI ++ ++N + + S+ GEG N+ FPFDY
Sbjct: 1799 DVILDEKSITGEEMSDIYVKGWIPGNEENKQKTDVHYRSLD--GEGNFNWRFVFPFDYLP 1856
Query: 104 AE 105
AE
Sbjct: 1857 AE 1858
>AB033033-1|BAA86521.2| 2061|Homo sapiens KIAA1207 protein protein.
Length = 2061
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 47 EVILRGKQI---DMSDIENDPFLRFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKA 103
+VIL K I +MSDI ++ ++N + + S+ GEG N+ FPFDY
Sbjct: 1799 DVILDEKSITGEEMSDIYVKGWIPGNEENKQKTDVHYRSLD--GEGNFNWRFVFPFDYLP 1856
Query: 104 AE 105
AE
Sbjct: 1857 AE 1858
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.325 0.141 0.461
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,969,302
Number of Sequences: 224733
Number of extensions: 1041108
Number of successful extensions: 2055
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2026
Number of HSP's gapped (non-prelim): 39
length of query: 160
length of database: 73,234,838
effective HSP length: 84
effective length of query: 76
effective length of database: 54,357,266
effective search space: 4131152216
effective search space used: 4131152216
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 61 (28.7 bits)
- SilkBase 1999-2023 -