GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001534-TA|BGIBMGA001534-PA|IPR001522|Fatty acid
desaturase, type 1, IPR005804|Fatty acid desaturase
         (160 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         26   0.16 
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    26   0.16 
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    26   0.16 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    24   0.64 
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    22   3.4  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   5.9  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   7.9  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 26.2 bits (55), Expect = 0.16
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 134 PEMINAIAKKLGDGTPVHFP 153
           P  +N I+KK+GDG P+  P
Sbjct: 87  PSSLNVISKKVGDGGPLLQP 106


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 26.2 bits (55), Expect = 0.16
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 134 PEMINAIAKKLGDGTPVHFP 153
           P  +N I+KK+GDG P+  P
Sbjct: 87  PSSLNVISKKVGDGGPLLQP 106


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 26.2 bits (55), Expect = 0.16
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 134 PEMINAIAKKLGDGTPVHFP 153
           P  +N I+KK+GDG P+  P
Sbjct: 87  PSSLNVISKKVGDGGPLLQP 106


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 24.2 bits (50), Expect = 0.64
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 18/87 (20%)

Query: 67  RFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKAAEHFDFFNFGTKFIKLFEKIGWA 126
           +++D N    E R  +I +   G +NY +  P D       D +N G  F+ +    G  
Sbjct: 39  KYFDYNFGSDEKRQAAIQS---GEYNYKNNVPIDV------DRWN-GKTFVTILRNDG-- 86

Query: 127 YDLKEATPEMINAIAKKLGDGTPVHFP 153
                  P  +N I+ K+G+G P+  P
Sbjct: 87  ------VPSSLNVISNKIGNGGPLLEP 107


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/45 (17%), Positives = 21/45 (46%)

Query: 67  RFYDKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKAAEHFDFFN 111
           R  +  I+   N   +       ++NY++ +  +YK  ++++  N
Sbjct: 75  RSKEPKIISNNNSLSNNYNYNNNYNNYNNNYNTNYKKLQYYNIIN 119


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 8/15 (53%), Positives = 12/15 (80%)

Query: 45  NNEVILRGKQIDMSD 59
           +++V+LR KQI  SD
Sbjct: 304 SHDVLLRAKQIGFSD 318


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 25  PHNANRGLFFSHIGWLMMKKNNEVILRGKQ 54
           P NA  GLF    GWL     +   + G++
Sbjct: 221 PVNAIMGLFVLWWGWLAFNSGSTYGVSGQR 250


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.325    0.141    0.461 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,356
Number of Sequences: 429
Number of extensions: 2191
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 7
length of query: 160
length of database: 140,377
effective HSP length: 53
effective length of query: 107
effective length of database: 117,640
effective search space: 12587480
effective search space used: 12587480
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 41 (20.6 bits)