GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001533-TA|BGIBMGA001533-PA|IPR003599|Immunoglobulin
subtype, IPR003598|Immunoglobulin subtype 2,
IPR007110|Immunoglobulin-like, IPR013151|Immunoglobulin
         (335 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    28   0.42 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   4.0  
AY745215-1|AAU93482.1|   56|Anopheles gambiae cytochrome P450 pr...    24   6.9  

>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 27.9 bits (59), Expect = 0.42
 Identities = 11/39 (28%), Positives = 22/39 (56%)

Query: 181 RTIFTNLTVLPPVITINGDDSHDMKDRFYKAGSAIKLSC 219
           +++   L +L  V+  +GD  +D  +RF + G   +L+C
Sbjct: 119 KSLLMVLVLLINVVIADGDTCNDANERFLECGPVYQLAC 157


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 108  LNCRVVMLKDKTVMWLRNT-TDSAQLLTVGPAPYTGDSRIAVKFQYPNNW 156
            L CR   + +  +  LR+    +  L  +G     GD  IA KF+  +NW
Sbjct: 1701 LYCRYDNVHEGKLSHLRSKQVSNLNLYRLGRRKRLGDCMIAAKFEPHDNW 1750


>AY745215-1|AAU93482.1|   56|Anopheles gambiae cytochrome P450
          protein.
          Length = 56

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 26 EKDSLALSREIFKNITKQLRENIKREGATDKTD 58
          E + + + R +  ++ K+L+EN K   AT K D
Sbjct: 19 ETNCVNIIRNMSLDLMKELKENYKNSKATVKED 51


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.134    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,197
Number of Sequences: 2123
Number of extensions: 8940
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 3
length of query: 335
length of database: 516,269
effective HSP length: 64
effective length of query: 271
effective length of database: 380,397
effective search space: 103087587
effective search space used: 103087587
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)