Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001533-TA|BGIBMGA001533-PA|IPR003599|Immunoglobulin
subtype, IPR003598|Immunoglobulin subtype 2,
IPR007110|Immunoglobulin-like, IPR013151|Immunoglobulin
(335 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110487-14|CAB54429.2| 268|Caenorhabditis elegans Hypothetical... 49 5e-06
AF456253-1|AAL59611.1| 268|Caenorhabditis elegans secreted 2-im... 49 5e-06
Z81045-4|CAB54202.2| 402|Caenorhabditis elegans Hypothetical pr... 35 0.094
Z81045-3|CAB02817.3| 280|Caenorhabditis elegans Hypothetical pr... 35 0.094
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 33 0.38
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 33 0.38
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 31 1.2
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 31 1.2
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 31 1.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 1.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 1.2
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 31 1.2
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 31 1.2
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 31 1.2
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 31 1.2
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 31 1.2
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 31 1.5
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 30 2.0
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 30 2.0
Z83234-7|CAB76745.1| 667|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z82067-4|CAB76738.1| 667|Caenorhabditis elegans Hypothetical pr... 29 6.1
U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1... 29 6.1
U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1... 29 6.1
U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1... 29 6.1
AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR... 29 6.1
AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein. 29 6.1
Z75711-1|CAB00032.1| 196|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z68314-10|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical p... 28 8.1
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 28 8.1
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 28 8.1
>AL110487-14|CAB54429.2| 268|Caenorhabditis elegans Hypothetical
protein Y39E4B.8 protein.
Length = 268
Score = 48.8 bits (111), Expect = 5e-06
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 5/133 (3%)
Query: 93 EKYTQVTAHVGAE--ALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIAVKF 150
E +Q +V AE A L+C V + + W R +D A LLT G +T D R V
Sbjct: 38 ENPSQTIVNVVAENPAYLHCSVPPDAEHEIAWTR-VSDGA-LLTAGNRTFTRDPRWQVSK 95
Query: 151 QYPNNWRLSMNPVKRSDAGHYMCQISTHPPRTIFTNLTVL-PPVITINGDDSHDMKDRFY 209
+ N W L++ ++ D+G Y+C+I+ L VL PP+ + + K
Sbjct: 96 KSANIWVLNLRRAEQQDSGCYLCEINDKHNTVYAVYLKVLEPPLPSPSSLQKKSTKLMAN 155
Query: 210 KAGSAIKLSCILS 222
+G + L+C ++
Sbjct: 156 MSGDEVVLNCTVT 168
>AF456253-1|AAL59611.1| 268|Caenorhabditis elegans secreted
2-immunoglobulin-domainprotein ZIG-8 protein.
Length = 268
Score = 48.8 bits (111), Expect = 5e-06
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 5/133 (3%)
Query: 93 EKYTQVTAHVGAE--ALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIAVKF 150
E +Q +V AE A L+C V + + W R +D A LLT G +T D R V
Sbjct: 38 ENPSQTIVNVVAENPAYLHCSVPPDAEHEIAWTR-VSDGA-LLTAGNRTFTRDPRWQVSK 95
Query: 151 QYPNNWRLSMNPVKRSDAGHYMCQISTHPPRTIFTNLTVL-PPVITINGDDSHDMKDRFY 209
+ N W L++ ++ D+G Y+C+I+ L VL PP+ + + K
Sbjct: 96 KSANIWVLNLRRAEQQDSGCYLCEINDKHNTVYAVYLKVLEPPLPSPSSLQKKSTKLMAN 155
Query: 210 KAGSAIKLSCILS 222
+G + L+C ++
Sbjct: 156 MSGDEVVLNCTVT 168
>Z81045-4|CAB54202.2| 402|Caenorhabditis elegans Hypothetical
protein C36F7.4b protein.
Length = 402
Score = 34.7 bits (76), Expect = 0.094
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 154 NNWRLSMNPVKRSDAGHYMCQISTHP 179
N W L++ V+ SD G+Y CQI+T P
Sbjct: 152 NEWVLTIKNVQESDRGNYSCQINTEP 177
>Z81045-3|CAB02817.3| 280|Caenorhabditis elegans Hypothetical
protein C36F7.4a protein.
Length = 280
Score = 34.7 bits (76), Expect = 0.094
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 154 NNWRLSMNPVKRSDAGHYMCQISTHP 179
N W L++ V+ SD G+Y CQI+T P
Sbjct: 62 NEWVLTIKNVQESDRGNYSCQINTEP 87
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 32.7 bits (71), Expect = 0.38
Identities = 27/86 (31%), Positives = 33/86 (38%), Gaps = 15/86 (17%)
Query: 88 PYFEEEKYTQVTAHVGAEALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIA 147
PY +E A G E +L C V+ TV W R G DSR
Sbjct: 3390 PYIDETIDQTPKAVAGGEIILKCPVLGNPTPTVTWKR-----------GDDAVPNDSRHT 3438
Query: 148 VKFQYPNNWRLSMNPVKRSDAGHYMC 173
+ NN+ L +N V DAG Y C
Sbjct: 3439 IV----NNYDLKINSVTTEDAGQYSC 3460
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 32.7 bits (71), Expect = 0.38
Identities = 27/86 (31%), Positives = 33/86 (38%), Gaps = 15/86 (17%)
Query: 88 PYFEEEKYTQVTAHVGAEALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIA 147
PY +E A G E +L C V+ TV W R G DSR
Sbjct: 3390 PYIDETIDQTPKAVAGGEIILKCPVLGNPTPTVTWKR-----------GDDAVPNDSRHT 3438
Query: 148 VKFQYPNNWRLSMNPVKRSDAGHYMC 173
+ NN+ L +N V DAG Y C
Sbjct: 3439 IV----NNYDLKINSVTTEDAGQYSC 3460
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 32.7 bits (71), Expect = 0.38
Identities = 27/86 (31%), Positives = 33/86 (38%), Gaps = 15/86 (17%)
Query: 88 PYFEEEKYTQVTAHVGAEALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIA 147
PY +E A G E +L C V+ TV W R G DSR
Sbjct: 3390 PYIDETIDQTPKAVAGGEIILKCPVLGNPTPTVTWKR-----------GDDAVPNDSRHT 3438
Query: 148 VKFQYPNNWRLSMNPVKRSDAGHYMC 173
+ NN+ L +N V DAG Y C
Sbjct: 3439 IV----NNYDLKINSVTTEDAGQYSC 3460
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 32.7 bits (71), Expect = 0.38
Identities = 27/86 (31%), Positives = 33/86 (38%), Gaps = 15/86 (17%)
Query: 88 PYFEEEKYTQVTAHVGAEALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIA 147
PY +E A G E +L C V+ TV W R G DSR
Sbjct: 3390 PYIDETIDQTPKAVAGGEIILKCPVLGNPTPTVTWKR-----------GDDAVPNDSRHT 3438
Query: 148 VKFQYPNNWRLSMNPVKRSDAGHYMC 173
+ NN+ L +N V DAG Y C
Sbjct: 3439 IV----NNYDLKINSVTTEDAGQYSC 3460
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 32.7 bits (71), Expect = 0.38
Identities = 27/86 (31%), Positives = 33/86 (38%), Gaps = 15/86 (17%)
Query: 88 PYFEEEKYTQVTAHVGAEALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIA 147
PY +E A G E +L C V+ TV W R G DSR
Sbjct: 3390 PYIDETIDQTPKAVAGGEIILKCPVLGNPTPTVTWKR-----------GDDAVPNDSRHT 3438
Query: 148 VKFQYPNNWRLSMNPVKRSDAGHYMC 173
+ NN+ L +N V DAG Y C
Sbjct: 3439 IV----NNYDLKINSVTTEDAGQYSC 3460
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 99 TAHVGAEALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIAVKFQYPNNWRL 158
T + G L+C+V + +V+W ++ P DSR +++++ L
Sbjct: 5393 TVNGGQPIRLSCKVDAIPRASVVWYKDGL-----------PLRADSRTSIQYEEDGTATL 5441
Query: 159 SMNPVKRSDAGHYMCQISTHPPRTIFTNLTV 189
++N D G Y C ++T+ TI T+ +V
Sbjct: 5442 AINDSTEEDIGAYRC-VATNAHGTINTSCSV 5471
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 99 TAHVGAEALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIAVKFQYPNNWRL 158
+A G + +L CR+ + TV W + D ++ + G + D + +N +L
Sbjct: 1527 SAQAGQQIMLTCRISSRSESTVAWFK---DDERIESAGRYELSSDKK--------SNHKL 1575
Query: 159 SMNPVKRSDAGHYMCQIS 176
+ V+ D G Y C ++
Sbjct: 1576 VCHAVQSQDTGKYRCVVT 1593
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 99 TAHVGAEALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIAVKFQYPNNWRL 158
+A G + +L CR+ + TV W + D ++ + G + D + +N +L
Sbjct: 1542 SAQAGQQIMLTCRISSRSESTVAWFK---DDERIESAGRYELSSDKK--------SNHKL 1590
Query: 159 SMNPVKRSDAGHYMCQIS 176
+ V+ D G Y C ++
Sbjct: 1591 VCHAVQSQDTGKYRCVVT 1608
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 99 TAHVGAEALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIAVKFQYPNNWRL 158
+A G + +L CR+ + TV W + D ++ + G + D + +N +L
Sbjct: 17353 SAQAGQQIMLTCRISSRSESTVAWFK---DDERIESAGRYELSSDKK--------SNHKL 17401
Query: 159 SMNPVKRSDAGHYMCQIS 176
+ V+ D G Y C ++
Sbjct: 17402 VCHAVQSQDTGKYRCVVT 17419
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 99 TAHVGAEALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIAVKFQYPNNWRL 158
+A G + +L CR+ + TV W + D ++ + G + D + +N +L
Sbjct: 17368 SAQAGQQIMLTCRISSRSESTVAWFK---DDERIESAGRYELSSDKK--------SNHKL 17416
Query: 159 SMNPVKRSDAGHYMCQIS 176
+ V+ D G Y C ++
Sbjct: 17417 VCHAVQSQDTGKYRCVVT 17434
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 99 TAHVGAEALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIAVKFQYPNNWRL 158
T + G L+C+V + +V+W ++ P DSR +++++ L
Sbjct: 4753 TVNGGQPIRLSCKVDAIPRASVVWYKDGL-----------PLRADSRTSIQYEEDGTATL 4801
Query: 159 SMNPVKRSDAGHYMCQISTHPPRTIFTNLTV 189
++N D G Y C ++T+ TI T+ +V
Sbjct: 4802 AINDSTEEDIGAYRC-VATNAHGTINTSCSV 4831
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 99 TAHVGAEALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIAVKFQYPNNWRL 158
T + G L+C+V + +V+W ++ P DSR +++++ L
Sbjct: 5393 TVNGGQPIRLSCKVDAIPRASVVWYKDGL-----------PLRADSRTSIQYEEDGTATL 5441
Query: 159 SMNPVKRSDAGHYMCQISTHPPRTIFTNLTV 189
++N D G Y C ++T+ TI T+ +V
Sbjct: 5442 AINDSTEEDIGAYRC-VATNAHGTINTSCSV 5471
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 99 TAHVGAEALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIAVKFQYPNNWRL 158
T + G L+C+V + +V+W ++ P DSR +++++ L
Sbjct: 5393 TVNGGQPIRLSCKVDAIPRASVVWYKDGL-----------PLRADSRTSIQYEEDGTATL 5441
Query: 159 SMNPVKRSDAGHYMCQISTHPPRTIFTNLTV 189
++N D G Y C ++T+ TI T+ +V
Sbjct: 5442 AINDSTEEDIGAYRC-VATNAHGTINTSCSV 5471
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 99 TAHVGAEALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIAVKFQYPNNWRL 158
T + G L+C+V + +V+W ++ P DSR +++++ L
Sbjct: 4753 TVNGGQPIRLSCKVDAIPRASVVWYKDGL-----------PLRADSRTSIQYEEDGTATL 4801
Query: 159 SMNPVKRSDAGHYMCQISTHPPRTIFTNLTV 189
++N D G Y C ++T+ TI T+ +V
Sbjct: 4802 AINDSTEEDIGAYRC-VATNAHGTINTSCSV 4831
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 99 TAHVGAEALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIAVKFQYPNNWRL 158
T + G L+C+V + +V+W ++ P DSR +++++ L
Sbjct: 5393 TVNGGQPIRLSCKVDAIPRASVVWYKDGL-----------PLRADSRTSIQYEEDGTATL 5441
Query: 159 SMNPVKRSDAGHYMCQISTHPPRTIFTNLTV 189
++N D G Y C ++T+ TI T+ +V
Sbjct: 5442 AINDSTEEDIGAYRC-VATNAHGTINTSCSV 5471
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
Query: 148 VKFQYPNNWRLSMNPVKRSDAGHYMCQISTHPPRTIFTNLTVLPPVITINGDD--SHDMK 205
VK+ N+ L+++ +++SD G Y C+IS +N+ V +NGD +
Sbjct: 504 VKYDLTNDG-LAIHDIRKSDEGEYTCEISG-------SNVKATANV-QVNGDSLIEYGPA 554
Query: 206 DRFYKAGSAIKLSCILSEEY 225
D+ G+ ++ SC +++EY
Sbjct: 555 DQKSLIGTNVEFSCEVAKEY 574
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 157 RLSMNPVKRSDAGHYMCQISTHPPRTIFTNLTV 189
RL++NPV+ SDAG Y+C +S + T+ T+
Sbjct: 98 RLTINPVQLSDAGTYIC-VSDYNGNTVEARATL 129
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 157 RLSMNPVKRSDAGHYMCQISTHPPRTIFTNLTV 189
RL++NPV+ SDAG Y+C +S + T+ T+
Sbjct: 98 RLTINPVQLSDAGTYIC-VSDYNGNTVEARATL 129
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 157 RLSMNPVKRSDAGHYMCQISTHPPRTIFTNLTV 189
RL++NPV+ SDAG Y+C +S + T+ T+
Sbjct: 98 RLTINPVQLSDAGTYIC-VSDYNGNTVEARATL 129
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 157 RLSMNPVKRSDAGHYMCQISTHPPRTIFTNLTV 189
RL++NPV+ SDAG Y+C +S + T+ T+
Sbjct: 98 RLTINPVQLSDAGTYIC-VSDYNGNTVEARATL 129
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 157 RLSMNPVKRSDAGHYMCQISTHPPRTIFTNLTV 189
RL++NPV+ SDAG Y+C +S + T+ T+
Sbjct: 98 RLTINPVQLSDAGTYIC-VSDYNGNTVEARATL 129
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 157 RLSMNPVKRSDAGHYMCQISTHPPRTIFTNLTV 189
RL++NPV+ SDAG Y+C +S + T+ T+
Sbjct: 98 RLTINPVQLSDAGTYIC-VSDYNGNTVEARATL 129
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 157 RLSMNPVKRSDAGHYMCQISTHPPRTIFTNLTV 189
RL++NPV+ SDAG Y+C +S + T+ T+
Sbjct: 98 RLTINPVQLSDAGTYIC-VSDYNGNTVEARATL 129
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 157 RLSMNPVKRSDAGHYMCQISTHPPRTIFTNLTV 189
RL++NPV+ SDAG Y+C +S + T+ T+
Sbjct: 98 RLTINPVQLSDAGTYIC-VSDYNGNTVEARATL 129
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 157 RLSMNPVKRSDAGHYMCQISTHPPRTIFTNLTV 189
RL++NPV+ SDAG Y+C +S + T+ T+
Sbjct: 98 RLTINPVQLSDAGTYIC-VSDYNGNTVEARATL 129
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 157 RLSMNPVKRSDAGHYMCQISTHPPRTIFTNLTV 189
RL++NPV+ SDAG Y+C +S + T+ T+
Sbjct: 98 RLTINPVQLSDAGTYIC-VSDYNGNTVEARATL 129
>Z83234-7|CAB76745.1| 667|Caenorhabditis elegans Hypothetical
protein W03H9.4 protein.
Length = 667
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 20 RRRRSEEKDSLALSREIFKNITKQLRENIKREGATDKTDHLLQTKVEDTRNYAPYQSYXX 79
RR++ E K + + + + + K++R++ KR+ A D D L+ ++ T P+
Sbjct: 44 RRQKEEMKKNESAEEKRARRMEKKMRKDAKRKDA-DAEDTLIPPELNYTNLNNPFND-TK 101
Query: 80 XXXXXXWGPYFEEEKYTQVT 99
WG E E + +T
Sbjct: 102 LTQTFVWGKKLEREGKSGLT 121
>Z82067-4|CAB76738.1| 667|Caenorhabditis elegans Hypothetical
protein W03H9.4 protein.
Length = 667
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 20 RRRRSEEKDSLALSREIFKNITKQLRENIKREGATDKTDHLLQTKVEDTRNYAPYQSYXX 79
RR++ E K + + + + + K++R++ KR+ A D D L+ ++ T P+
Sbjct: 44 RRQKEEMKKNESAEEKRARRMEKKMRKDAKRKDA-DAEDTLIPPELNYTNLNNPFND-TK 101
Query: 80 XXXXXXWGPYFEEEKYTQVT 99
WG E E + +T
Sbjct: 102 LTQTFVWGKKLEREGKSGLT 121
>U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1,
isoform c protein.
Length = 942
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 119 TVMWLRNTTDSAQLLTVGPAPYTGDSRIAVKFQYPNNWRLSMNPVKRSDAGHYMCQIS 176
+V +++N T + + AP G +R V +Y + W L + + SD+G YMC+++
Sbjct: 203 SVFFIQNGTIMREATSHPFAPRNGLAR-RVHEKY-SCWELEIKNAQTSDSGSYMCRVT 258
>U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1,
isoform a protein.
Length = 1409
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 119 TVMWLRNTTDSAQLLTVGPAPYTGDSRIAVKFQYPNNWRLSMNPVKRSDAGHYMCQIS 176
+V +++N T + + AP G +R V +Y + W L + + SD+G YMC+++
Sbjct: 203 SVFFIQNGTIMREATSHPFAPRNGLAR-RVHEKY-SCWELEIKNAQTSDSGSYMCRVT 258
>U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1,
isoform b protein.
Length = 1444
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 119 TVMWLRNTTDSAQLLTVGPAPYTGDSRIAVKFQYPNNWRLSMNPVKRSDAGHYMCQIS 176
+V +++N T + + AP G +R V +Y + W L + + SD+G YMC+++
Sbjct: 203 SVFFIQNGTIMREATSHPFAPRNGLAR-RVHEKY-SCWELEIKNAQTSDSGSYMCRVT 258
>AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR-1
protein.
Length = 942
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 119 TVMWLRNTTDSAQLLTVGPAPYTGDSRIAVKFQYPNNWRLSMNPVKRSDAGHYMCQIS 176
+V +++N T + + AP G +R V +Y + W L + + SD+G YMC+++
Sbjct: 203 SVFFIQNGTIMREATSHPFAPRNGLAR-RVHEKY-SCWELEIKNAQTSDSGSYMCRVT 258
>AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein.
Length = 1409
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 119 TVMWLRNTTDSAQLLTVGPAPYTGDSRIAVKFQYPNNWRLSMNPVKRSDAGHYMCQIS 176
+V +++N T + + AP G +R V +Y + W L + + SD+G YMC+++
Sbjct: 203 SVFFIQNGTIMREATSHPFAPRNGLAR-RVHEKY-SCWELEIKNAQTSDSGSYMCRVT 258
>Z75711-1|CAB00032.1| 196|Caenorhabditis elegans Hypothetical
protein K02B12.2 protein.
Length = 196
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 4 LVEPLRFPEDYRTNGVRRRRS--EEKDSLALSREIFKNITKQL-RENIKREGATDKTDHL 60
++E L P+++ + + S +++ S + +I I K++ RE K ++DK D
Sbjct: 73 IIELLDMPDEHNAEDIHSKPSPAKKRKSEEVKPKIEAKIEKKVAREETKLMESSDKIDKA 132
Query: 61 LQTKVEDTRN-YAP 73
+++ V +T N Y P
Sbjct: 133 IESLVAETENQYDP 146
>Z68314-10|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 10 FPEDYRTNGVRRRRSEEKDSLALSREIFKNITKQLRENIKREGATDKTD 58
+ DYR + EEK+ SRE+ K ++LRE ++E +T+
Sbjct: 342 YEPDYRQEKSKEETPEEKEKREQSREVRKQ-RRKLREERRKEVERQRTE 389
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 10 FPEDYRTNGVRRRRSEEKDSLALSREIFKNITKQLRENIKREGATDKTD 58
+ DYR + EEK+ SRE+ K ++LRE ++E +T+
Sbjct: 342 YEPDYRQEKSKEETPEEKEKREQSREVRKQ-RRKLREERRKEVERQRTE 389
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 10 FPEDYRTNGVRRRRSEEKDSLALSREIFKNITKQLRENIKREGATDKTD 58
+ DYR + EEK+ SRE+ K ++LRE ++E +T+
Sbjct: 342 YEPDYRQEKSKEETPEEKEKREQSREVRKQ-RRKLREERRKEVERQRTE 389
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.134 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,512,820
Number of Sequences: 27539
Number of extensions: 229753
Number of successful extensions: 773
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 652
Number of HSP's gapped (non-prelim): 143
length of query: 335
length of database: 12,573,161
effective HSP length: 82
effective length of query: 253
effective length of database: 10,314,963
effective search space: 2609685639
effective search space used: 2609685639
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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