Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001533-TA|BGIBMGA001533-PA|IPR003599|Immunoglobulin
subtype, IPR003598|Immunoglobulin subtype 2,
IPR007110|Immunoglobulin-like, IPR013151|Immunoglobulin
(335 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 27 0.30
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 27 0.30
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 26 0.40
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 24 1.6
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 24 2.1
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 23 2.8
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 22 8.7
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 26.6 bits (56), Expect = 0.30
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 88 PYFEEEKYTQVTAHVGAEALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIA 147
PYF VT G A L+C V TV WL+ + + P+ + R+
Sbjct: 808 PYFAAPSRL-VTVKKGDTATLHCEVHGDTPVTVTWLKGGK-----IELNPST---NYRVT 858
Query: 148 VKFQYPNNW---RLSMNPVKRSDAGHYMCQIS 176
VK + + +L ++ + SD+G Y CQ S
Sbjct: 859 VKREVTPDGVIAQLQISSAEASDSGAYFCQAS 890
Score = 23.0 bits (47), Expect = 3.7
Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 10/82 (12%)
Query: 96 TQVTAHVGAEALLNCRVVMLKDKTVMWLRNT-TDSAQLLTVGPAPYTGDSRIAVKFQYPN 154
T V+ L+C+ + T++W + T + S + + YT + +
Sbjct: 717 TDVSVERNKHVALHCQAQGVPTPTIVWKKATGSKSGEYEELRERAYT---------KILS 767
Query: 155 NWRLSMNPVKRSDAGHYMCQIS 176
N L + VK G Y+CQ S
Sbjct: 768 NGTLLLQHVKEDREGFYLCQAS 789
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 26.6 bits (56), Expect = 0.30
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 88 PYFEEEKYTQVTAHVGAEALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIA 147
PYF VT G A L+C V TV WL+ + + P+ + R+
Sbjct: 804 PYFAAPSRL-VTVKKGDTATLHCEVHGDTPVTVTWLKGGK-----IELNPST---NYRVT 854
Query: 148 VKFQYPNNW---RLSMNPVKRSDAGHYMCQIS 176
VK + + +L ++ + SD+G Y CQ S
Sbjct: 855 VKREVTPDGVIAQLQISSAEASDSGAYFCQAS 886
Score = 23.0 bits (47), Expect = 3.7
Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 10/82 (12%)
Query: 96 TQVTAHVGAEALLNCRVVMLKDKTVMWLRNT-TDSAQLLTVGPAPYTGDSRIAVKFQYPN 154
T V+ L+C+ + T++W + T + S + + YT + +
Sbjct: 713 TDVSVERNKHVALHCQAQGVPTPTIVWKKATGSKSGEYEELRERAYT---------KILS 763
Query: 155 NWRLSMNPVKRSDAGHYMCQIS 176
N L + VK G Y+CQ S
Sbjct: 764 NGTLLLQHVKEDREGFYLCQAS 785
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 26.2 bits (55), Expect = 0.40
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 103 GAEALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIAVKFQYPNNWRLSMNP 162
G++A + C+ V W + D+ P YT D +++ + LS+N
Sbjct: 693 GSDARVECKADGFPKPQVTWKKAAGDT-------PGDYT-DLKLSNPDISVEDGTLSINN 744
Query: 163 VKRSDAGHYMCQ 174
+++++ G+Y+C+
Sbjct: 745 IQKTNEGYYLCE 756
Score = 22.6 bits (46), Expect = 5.0
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 158 LSMNPVKRSDAGHYMCQI-STHPPRTIFTNLTVLPP 192
L + V R+DAG Y C + +T T+ L V P
Sbjct: 1331 LFIKEVDRTDAGEYSCYVENTFGHDTVTHQLIVHAP 1366
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 87 GPYFEEEKYTQVTAHVGAEALLNCRVVMLKDKTVMWLR 124
GP F +E +V G A++ C+ ++W+R
Sbjct: 2 GPVFVKEPPNRVDFSNGTGAVVECQARGNPQPDIIWVR 39
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 24.2 bits (50), Expect = 1.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 157 RLSMNPVKRSDAGHYMCQ 174
++ ++P + DAG+Y CQ
Sbjct: 84 KMEIDPATQKDAGYYECQ 101
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 154 NNWRLSMNPVKRSDAGHYMCQIST 177
N +L + V +D G YMCQ S+
Sbjct: 455 NGTKLIIKNVDYADTGAYMCQASS 478
Score = 21.8 bits (44), Expect = 8.7
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 98 VTAHVGAEALLNCRVVMLKDKTVMWLRNTTD 128
++A VG + C V ++W RN D
Sbjct: 320 ISARVGDNVEIKCDVTGTPPPPLVWRRNGAD 350
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 23.4 bits (48), Expect = 2.8
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 125 NTTDSAQLLTVGPAPYTGDSRIAVKFQYPNNW 156
N T+ + + P D +K +YPNNW
Sbjct: 140 NNTNKYKDYYIWVDPVKDDKGNPIKDKYPNNW 171
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 21.8 bits (44), Expect = 8.7
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 146 IAVKFQYPNNWRL 158
+A+ + PNNWR+
Sbjct: 18 MAIAVELPNNWRI 30
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.319 0.134 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,005
Number of Sequences: 429
Number of extensions: 2833
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 14
length of query: 335
length of database: 140,377
effective HSP length: 58
effective length of query: 277
effective length of database: 115,495
effective search space: 31992115
effective search space used: 31992115
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)
- SilkBase 1999-2023 -