Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001532-TA|BGIBMGA001532-PA|undefined
         (122 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   4.0  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    20   6.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    20   6.9  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 75  PSGQEVHFSLEILIEDDFPKNQQLTVEFIIEDQD 108
           P G+ ++ SL   +     K+Q  T E + E +D
Sbjct: 247 PLGKNLNLSLHASLNHTLTKDQPETYELVKEWRD 280


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 6.9
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 87  LIEDDFPKNQQLTVEFIIEDQDNKPLICAELPIV 120
           LIE+  P N++L  +    D+    L   EL  V
Sbjct: 327 LIENVIPSNEELICDKRFVDESANNLSIEELDFV 360


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 6.9
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 87  LIEDDFPKNQQLTVEFIIEDQDNKPLICAELPIV 120
           LIE+  P N++L  +    D+    L   EL  V
Sbjct: 342 LIENVIPSNEELICDKRFVDESANNLSIEELDFV 375


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.325    0.139    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,925
Number of Sequences: 429
Number of extensions: 1066
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 122
length of database: 140,377
effective HSP length: 51
effective length of query: 71
effective length of database: 118,498
effective search space:  8413358
effective search space used:  8413358
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.1 bits)
S2: 39 (19.8 bits)