Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001531-TA|BGIBMGA001531-PA|IPR000276|Rhodopsin-like GPCR
superfamily
(364 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC18H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 30 0.59
SPCC1682.06 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 30 0.59
SPAPB1A11.03 |||FMN dependent dehydrogenase|Schizosaccharomyces ... 29 0.78
SPCC613.01 ||SPCC757.14|membrane transporter|Schizosaccharomyces... 27 3.1
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 3.1
SPBC36.03c |||spermidine family transporter |Schizosaccharomyces... 27 5.5
SPAC26H5.13c |||DUF1753 family protein|Schizosaccharomyces pombe... 27 5.5
SPCC330.07c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 7.3
SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces p... 26 9.6
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 26 9.6
>SPBC18H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 242
Score = 29.9 bits (64), Expect = 0.59
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 245 HGFYTERWQEQAYTTLSLVFMFILPLIILVSTYVSTVRTIAQSEKVFK 292
H FY + +QA L+ V +++ I+L+ TYV TV + S + K
Sbjct: 92 HNFYN--YFDQALADLNSVVKYVIETIVLIFTYVMTVIIVYFSFSLIK 137
>SPCC1682.06 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 238
Score = 29.9 bits (64), Expect = 0.59
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 245 HGFYTERWQEQAYTTLSLVFMFILPLIILVSTYVSTVRTIAQSEKVFK 292
H FY + +QA L+ V +++ I+L+ TYV TV + S + K
Sbjct: 92 HNFYN--YFDQALADLNSVVKYVIETIVLIFTYVMTVIIVYFSFSLIK 137
>SPAPB1A11.03 |||FMN dependent dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 407
Score = 29.5 bits (63), Expect = 0.78
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 311 LIDRAKMKSLRMSVVIVAAFLIWWTPYYVMMIIFTFLNPD 350
L++RAK R+ +V + F++ W P + FLNPD
Sbjct: 173 LLNRAKKTGCRVLIVTLDTFILGWRPSDMDNGYDPFLNPD 212
>SPCC613.01 ||SPCC757.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 497
Score = 27.5 bits (58), Expect = 3.1
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 121 PSWTAIYSLIFQLSIADLLVTIFCIAGEAAWSFA-VQWYAGNIGCKLFKFLQMLALYLST 179
P + I ++ Q+ I+ + T+ I G A + V + A N+G L F+Q+ LYL T
Sbjct: 434 PKYHMITGVVVQVGIS-IGETVGSICGGAIFDITTVGFIAMNLGIALLVFIQL--LYLWT 490
Query: 180 FVLVLIG 186
F+ G
Sbjct: 491 FIKTKTG 497
>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1877
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 249 TERWQEQAYTTLSLVFMFILPLIILVSTYVSTV 281
T R QE+ T+ +L F+ +L L +L S+Y+ V
Sbjct: 301 TLRLQEKLGTSCNLFFVLVLKLALLSSSYIGFV 333
>SPBC36.03c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 538
Score = 26.6 bits (56), Expect = 5.5
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 257 YTTLSLVFMFILPLIILVSTYVSTVRTIAQSEKVFKPEVRRQEKYFTPDMNRRRLIDRAK 316
Y + V +F P++ L++ Y+S V I P + ++++F+ +D
Sbjct: 316 YLAVPFVLLFCEPIVFLLTLYMSFVYGILYLLLEAYPIIFAEKRHFSLG------VDALP 369
Query: 317 MKSLRMSVVIVAAFLIWWTPYY 338
L + V++ AA + ++ YY
Sbjct: 370 YIGLLVGVILGAALIAYFQGYY 391
>SPAC26H5.13c |||DUF1753 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 26.6 bits (56), Expect = 5.5
Identities = 26/112 (23%), Positives = 54/112 (48%), Gaps = 15/112 (13%)
Query: 120 RPSWTAIYSLIF---------QLSIADLLVTIFCIAGEAAWSFAVQWYAGNIGCKLFKFL 170
RP+W+A++ IF L + ++ F I + + + + N ++ L
Sbjct: 6 RPNWSALFEKIFIQKSFLGFCSLRVGCEIIIWFAIINKVSGLYGIVSLFQNSDASPWQVL 65
Query: 171 QMLALYLSTFVLVLIGVDRWLAVKYPMKSMATATRSGRLVIIAWVLSVILSI 222
+Y+S+ VL+LI + WLA+ P S+ A + +I ++L+V+ ++
Sbjct: 66 ----MYVSS-VLMLI-LFSWLAIHIPKSSVPHALILFYVYLIDFLLNVLFTV 111
>SPCC330.07c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 7.3
Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 11/126 (8%)
Query: 107 ISIRRSKRCRGRARPSWTAIYSLIFQLSIADLLVTIFCIAGEAAWSFAVQWYAGNI---- 162
+S ++ R + SW + L F +A + F + G A ++ Y G +
Sbjct: 292 VSQQKENDDEDRPKLSWKHKFLLFFLAEVA--FIAYFTVNGYQA---SISIYTGKLYNYD 346
Query: 163 GCKLFKFLQMLALYLSTFVLVLIGVDRWLAVKYPMKSMATATRSGRLVIIAWVLSVILSI 222
+ F+ + AL ++ F+L + RWL ++ M + V I VL + +
Sbjct: 347 AFQSGNFIALSALIVAPFILASSFLSRWLEDRHIM--LGGLFLGILAVAIHLVLDAVHKL 404
Query: 223 PQAVVF 228
P V F
Sbjct: 405 PMQVYF 410
>SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1040
Score = 25.8 bits (54), Expect = 9.6
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 11 YDGNIMYPSELTLRTEFNTDGNNMNVCAIWPIEKCIEILILNDTKTDDILGRSFIYNDT- 69
Y+ Y L + D N+ V + E+C ++L +N++ ++G S I D
Sbjct: 702 YEDYESYKENYHLELVDSYDDNSFRVFSFTENERCEKVLKINESSL--LVGTSIIEQDKL 759
Query: 70 -----QLTCLEHAPVLTKTTVIRASVLSA 93
+L LE L V+ + VLSA
Sbjct: 760 VPVNGRLILLEFEKELQSLKVVSSMVLSA 788
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 25.8 bits (54), Expect = 9.6
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 258 TTLSLVFMFILPLIILVSTYVSTVRTIAQSEKVFKPEVRRQEKYFT----PDMNRRRLID 313
TT+ F+F L L +L TY T+ ++ K+ K E + KY T + R +L+
Sbjct: 207 TTIFSGFIFALSLPLLAETYPKTLLG-EKARKLNKSE--KTNKYHTEWNLEHIPRLKLVT 263
Query: 314 RAKMKSLRM 322
A M+ +RM
Sbjct: 264 PALMRPIRM 272
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.329 0.139 0.427
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,573,767
Number of Sequences: 5004
Number of extensions: 60872
Number of successful extensions: 183
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 179
Number of HSP's gapped (non-prelim): 11
length of query: 364
length of database: 2,362,478
effective HSP length: 74
effective length of query: 290
effective length of database: 1,992,182
effective search space: 577732780
effective search space used: 577732780
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 54 (25.8 bits)
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