Silkworm BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001530-TA|BGIBMGA001530-PA|IPR003931|Calcium-activated
SK potassium channel, IPR011996|SK channel region, IPR013099|Ion
transport 2, IPR004178|Calmodulin-binding
         (655 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         29   0.39 
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     25   6.3  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   8.4  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 29.1 bits (62), Expect = 0.39
 Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 6/84 (7%)

Query: 415 LLVTVASRK------LELTRAEKHVHNFMMETQLTKKLKNAAANVLRETWLIYKHTRLVK 468
           +L+T A RK      + +T   K+ H   M  +  ++L    AN+  +  ++    RL +
Sbjct: 124 ILITEADRKAIDESDIIMTFLNKNHHGSEMRHEKGRRLWFGIANIEDDVSVLMAELRLYR 183

Query: 469 RVHPGRVRTHQRKFLLAIYALRKV 492
           +++  +  T+     L +YAL ++
Sbjct: 184 KLNLNKYTTYNTSLTLTVYALTEL 207


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 25.0 bits (52), Expect = 6.3
 Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 456 ETWLIYKHTRLVKRVHPGRVRTHQRKFLLAIYALRKVKMDQRKLMDNANTITDMAKTQNT 515
           E W      RL+  ++P R+   +++  L  + +  ++++QR   D A  +T +AK  + 
Sbjct: 299 EAWNQANFERLL--LYPNRLPLAKQR--LEAFRMMLLQINQRNKHDFAPRLTRVAKELDK 354

Query: 516 VYEIVSDMSTRQDTIEERLTSLEEKLTT 543
               V   S  Q +  E+L +++    T
Sbjct: 355 CESFVKSGSKTQQSDLEKLVAVKRMFAT 382


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 8.4
 Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 4/63 (6%)

Query: 490 RKVKMDQRKLMDNANTITDMAKTQNTVYE----IVSDMSTRQDTIEERLTSLEEKLTTLQ 545
           +K++ ++ + +     + D  KT     E    I +++S    T +ER+  L+ +L  ++
Sbjct: 432 KKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRIKAELSQDVGTSKERIHELQSELDNVR 491

Query: 546 EQV 548
           EQ+
Sbjct: 492 EQL 494


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.134    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,283
Number of Sequences: 2123
Number of extensions: 21216
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 31
Number of HSP's gapped (non-prelim): 3
length of query: 655
length of database: 516,269
effective HSP length: 68
effective length of query: 587
effective length of database: 371,905
effective search space: 218308235
effective search space used: 218308235
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 51 (24.6 bits)