Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001530-TA|BGIBMGA001530-PA|IPR003931|Calcium-activated
SK potassium channel, IPR011996|SK channel region, IPR013099|Ion
transport 2, IPR004178|Calmodulin-binding
(655 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1711.14 |rec15||meiotic recombination protein Rec15|Schizosa... 31 0.38
SPBC11B10.03 |cog8||Golgi transport complex subunit Cog8 |Schizo... 31 0.50
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 30 0.88
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 29 1.5
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 29 1.5
SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom... 29 1.5
SPBC336.08 |spc24||spindle pole body protein Spc24|Schizosacchar... 29 2.0
SPCC1620.05 |||Rab geranylgeranyltransferase |Schizosaccharomyce... 29 2.7
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 29 2.7
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 28 3.6
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 28 3.6
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 28 4.7
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 4.7
SPBC1685.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 6.2
SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|ch... 27 6.2
SPAC8C9.06c |||mitochondrial translation regulator |Schizosaccha... 27 6.2
SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces p... 27 6.2
SPCC622.10c |||exocyst complex subunit Sec5 |Schizosaccharomyces... 27 8.2
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 27 8.2
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 27 8.2
>SPBC1711.14 |rec15||meiotic recombination protein
Rec15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 180
Score = 31.5 bits (68), Expect = 0.38
Identities = 15/66 (22%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 487 YALRKVKMDQRKLMDNANTITDMAKTQ-NTVYEIVSDMSTRQDTIEERLTSLEEKLTTLQ 545
Y++ ++ RKL A + K+Q N + +++M+T+Q+ + + + L ++ +Q
Sbjct: 3 YSVSAAQLWSRKLAMQAEDMQQHQKSQSNQIASCLAEMNTKQEVVNQTIGQLGRSISEVQ 62
Query: 546 EQVNSL 551
+Q + L
Sbjct: 63 QQNSQL 68
>SPBC11B10.03 |cog8||Golgi transport complex subunit Cog8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 400
Score = 31.1 bits (67), Expect = 0.50
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 479 QRKFLLAIYALRKVKMDQRKLMDNANTITDMAKTQNTVYEIVSDMSTRQDTIEERLTSLE 538
+RK L L+ V+ Q+ L DN N + D A+ Q+ Y+++ ++R D +E +
Sbjct: 50 KRKAELHAQKLKLVQKRQQLLRDNYNVLVDYARNQDAFYQLLE--NSRHD-FKELVLHTN 106
Query: 539 EKLTTLQEQVNSLPDVMARHR 559
+ ++ N L + +R
Sbjct: 107 QLYEPVKRSQNFLTSISEHYR 127
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 30.3 bits (65), Expect = 0.88
Identities = 20/108 (18%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 97 YTKASIYSQALKTLISMSTVILLGLIVAYHALEVQLFMIDNCADDWRIAMTWQRIAQIGL 156
+T ++ + S T+ + ++ +++L + +F + +C + + WQ ++ I
Sbjct: 123 WTTGKVFDALSQYATSQITLGKMISLINFNSLLITIFGLASCVFSFGVRFLWQYLSAIAG 182
Query: 157 ELAICAVHPIPGQYTFTWTTKLANKGGVI-GVE--VVPYDVTLSLPMF 201
+ A + + T+ + +K G++ V+ + Y+ ++SLPMF
Sbjct: 183 KRARSLCFHVLSSKSSTFYSLTESKSGLVNSVDRCIQFYEKSISLPMF 230
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 29.5 bits (63), Expect = 1.5
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 447 KNAAANVLRETWLIYKHTRLVKRVHPGRVRTHQRKFLLAIYALRKVKMDQRKL--MDNAN 504
K+ + + +E K RLVK+ +H ++ L+ +++ K K +Q+ M + +
Sbjct: 427 KDLSTYLSKELASTEKAFRLVKQQTVKSSHSHYQE-LITKFSVEKEKAEQKYFLTMKSTD 485
Query: 505 TITDMAKTQNTVY----EIVSDMSTRQDTIEERLTSLEEKLTTLQEQVNS 550
++ K Y EI+S M QDT R+ E++L L N+
Sbjct: 486 SLHAEVKLLRQKYQKTNEIISKMLNSQDTAVHRIIEFEDQLARLSSVRNN 535
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 506 ITDMAKTQNTVYEIVSDMSTRQDTIEERLTSLEEKLTTLQEQVNS 550
I +MA + TV ++ S +D EE +TSL+ +L ++++ S
Sbjct: 64 INEMALMKQTVMDLEMQQSKVKDRYEEEITSLKAQLEARRKEIAS 108
>SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/74 (22%), Positives = 39/74 (52%)
Query: 478 HQRKFLLAIYALRKVKMDQRKLMDNANTITDMAKTQNTVYEIVSDMSTRQDTIEERLTSL 537
H+ L AI +++K + D+ + + + ++ ++ + E +S ++E+R+ L
Sbjct: 59 HRIDILSAIQSMKKQQKDKLQQENKDQELKNIEESYKKLEEKTEHLSDDNVSLEKRVEYL 118
Query: 538 EEKLTTLQEQVNSL 551
E + T L + +NSL
Sbjct: 119 ETENTKLVKTLNSL 132
>SPBC336.08 |spc24||spindle pole body protein
Spc24|Schizosaccharomyces pombe|chr 2|||Manual
Length = 198
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/93 (18%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 480 RKFLLAIYALRKVKMDQRKLMDNANTITDMAKTQNTVYEIVSDMSTRQDTIEERLTSLEE 539
RK ++ A+ +K +A I K + + ++++ ++E +L ++E
Sbjct: 55 RKLEISTQAMESLKQTAES-SQHAEEILSREKEKFRIAKLLNITENEIMSLESQLQKMKE 113
Query: 540 KLTTLQEQVNSLPDVMARHRRCAYAAIVYYYAL 572
+L L+E+ N+ D+ + +Y++L
Sbjct: 114 QLLQLEERENTSEDICQSEENANMLKLNFYHSL 146
>SPCC1620.05 |||Rab geranylgeranyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 5/47 (10%)
Query: 529 TIEERLTSLEEKLTTLQEQVNSLPDVMARHRRCAYAAIVYYYALCKS 575
TIEER+ L++++ +QE L ++ +R C ++V Y ALCK+
Sbjct: 259 TIEERIQYLQKEIELIQE----LHEMEPENRWCC-ESLVNYEALCKT 300
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 484 LAIYALRKVKMDQRKLMDNANTITDM---AKTQNTVYEIVSDMSTRQDTIEERLTSLEEK 540
L + K + ++ +DNA+ I + + T+ + + + ++D +E+RL L +K
Sbjct: 140 LRLQLSEKEDLHKKLSVDNAHLIKQLDLLSSNMKTLMKEKTKVQGQRDLLEQRLQGLMKK 199
Query: 541 LTTLQEQVNSLPD 553
LT ++ SL D
Sbjct: 200 LTEVESLTVSLND 212
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 462 KHTRLVKRVHPGRVRTHQRKFLLAIYALRKVKMDQRKLMDNANT-ITDMAKTQNTVYEIV 520
+H RL+K + RVR K + + + D+R ++N +T + + +T + E +
Sbjct: 401 RHQRLMKANYDARVRAKAEKAIEEAAEAERAEADERLRLENFSTWVNEKRETHKILLEKI 460
Query: 521 S 521
S
Sbjct: 461 S 461
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 496 QRKLMDNANTITDMAKTQNTVYEIV-SDMSTRQDTIEERLTSLEEKLTTLQEQVNSLPD 553
Q+K + + T+ M +T +V S++STR EE++TSL +L L ++V L +
Sbjct: 970 QQKYLASEKTLEMMNETHEQFKHLVESEISTR----EEKITSLRSELLDLNKRVEVLKE 1024
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 487 YALRKVKMDQRKLMDNANTITDMAKTQNTVYEIVSDMSTRQDTIEERLTSLEEKLTTLQE 546
Y+LR ++ Q A + + KT+ Y + + S ++ + ++TSLE+++ LQ+
Sbjct: 937 YSLRNIEQLQAA-SKLAEEMVERVKTEYDEYRLQTSESLEKNHL--KITSLEQRIVILQD 993
Query: 547 QVNS 550
++ S
Sbjct: 994 EIAS 997
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 511 KTQNTVYEIVSDMSTRQDTIEERLTSLEEKLTTLQEQVN 549
K N Y+ S + + ERL S+EE L +LQE+++
Sbjct: 176 KAHNNRYDESSLTNPEFSILVERLKSIEENLQSLQERIS 214
>SPBC1685.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 325
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/52 (26%), Positives = 29/52 (55%)
Query: 509 MAKTQNTVYEIVSDMSTRQDTIEERLTSLEEKLTTLQEQVNSLPDVMARHRR 560
+A N +V + T + +++ S+E++L TLQEQ ++ +V + +R
Sbjct: 159 LAIVTNQRNTLVKRLQTYDNLEKKKALSMEDRLLTLQEQYDAHANVSSLEKR 210
>SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|chr
3|||Manual
Length = 872
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 175 TTKLANKGGVIGVEVVPYDVTLSLPMFFRLYLICRVMLLHSKLFTDAS 222
TT+LA + V+ ++ SL + ++ +C+V L +K+F S
Sbjct: 525 TTELAAQAAVLDSKLEGISTMFSLELALKIVHLCKVSLARAKVFMGTS 572
>SPAC8C9.06c |||mitochondrial translation regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 931
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 487 YALRKVKMDQRKLMDNANTITDMAKTQNTVYEIVSDMSTRQDTIEERLTSLEEKLTTLQE 546
Y + + D+R L+ N T DM + ++ + ++ D I+E L L +
Sbjct: 658 YMSKNFQPDKRALLFNPRTANDMTYPPSLFSSLIKEYTSLGD-IKEAKQVLSTYLEYFSK 716
Query: 547 QVNSLPDV 554
+ S PD+
Sbjct: 717 NITSKPDI 724
>SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 595
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/40 (22%), Positives = 23/40 (57%)
Query: 520 VSDMSTRQDTIEERLTSLEEKLTTLQEQVNSLPDVMARHR 559
+ ++ + D + ++T+LEE + L ++ L + ++ HR
Sbjct: 459 LEELKNQNDYLTSQITNLEEGMVMLNKENTKLSEALSNHR 498
>SPCC622.10c |||exocyst complex subunit Sec5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 815
Score = 27.1 bits (57), Expect = 8.2
Identities = 16/40 (40%), Positives = 19/40 (47%)
Query: 128 LEVQLFMIDNCADDWRIAMTWQRIAQIGLELAICAVHPIP 167
LE++ M N A DW IA T +AQ L H IP
Sbjct: 724 LELKDSMPPNEAADWMIATTSCMLAQFALHSPYAFFHDIP 763
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 575 SNAVSVTSVAPESGAATVSTNPLGSREHDSSLSNTSPAAA 614
S S +S +P S + T +T+P S SS S++S +++
Sbjct: 134 STTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSS 173
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 27.1 bits (57), Expect = 8.2
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 518 EIVSDMSTRQDTIEERLTSLEEKLTTLQEQVNSLPDVMAR--HRRCAYAAI 566
+I+ + + + I+E L +EE+L L+E+ N L + RRC AI
Sbjct: 177 KIMDETIQKSEKIDELLQYIEERLRELEEEKNDLAVYHKKDNERRCLEYAI 227
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.323 0.134 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,507,372
Number of Sequences: 5004
Number of extensions: 90774
Number of successful extensions: 305
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 287
Number of HSP's gapped (non-prelim): 31
length of query: 655
length of database: 2,362,478
effective HSP length: 77
effective length of query: 578
effective length of database: 1,977,170
effective search space: 1142804260
effective search space used: 1142804260
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 57 (27.1 bits)
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