Silkworm BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001529-TA|BGIBMGA001529-PA|undefined
         (324 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119457-1|AAM50111.1|  443|Drosophila melanogaster GH01258p pro...    68   2e-11
AE014298-732|AAF46027.3|  809|Drosophila melanogaster CG10706-PB...    68   2e-11
AE014298-731|AAF46029.3|  809|Drosophila melanogaster CG10706-PA...    68   2e-11
AE014298-730|AAS65264.1|  924|Drosophila melanogaster CG10706-PF...    68   2e-11
AE014298-729|AAN09136.2|  924|Drosophila melanogaster CG10706-PC...    68   2e-11
AE014298-658|AAF45971.2|  714|Drosophila melanogaster CG15473-PA...    30   3.8  

>AY119457-1|AAM50111.1|  443|Drosophila melanogaster GH01258p
           protein.
          Length = 443

 Score = 68.1 bits (159), Expect = 2e-11
 Identities = 43/83 (51%), Positives = 46/83 (55%), Gaps = 13/83 (15%)

Query: 181 PPALLL--PTTSARIIRQSSQPEXXXXXX----------XXXXXXXXXXXXXLRQLREP- 227
           PP L+   PT  +RIIRQSSQPE                             L+QLRE  
Sbjct: 310 PPVLITSSPTNGSRIIRQSSQPESSSTAICCGPHSACVGHAHSHSHTVPNVSLKQLRESS 369

Query: 228 GDGIAGIAADSLRINGGMRPFKQ 250
           GDGIAGIAADSLRINGGMRPFKQ
Sbjct: 370 GDGIAGIAADSLRINGGMRPFKQ 392


>AE014298-732|AAF46027.3|  809|Drosophila melanogaster CG10706-PB,
           isoform B protein.
          Length = 809

 Score = 68.1 bits (159), Expect = 2e-11
 Identities = 43/83 (51%), Positives = 46/83 (55%), Gaps = 13/83 (15%)

Query: 181 PPALLL--PTTSARIIRQSSQPEXXXXXX----------XXXXXXXXXXXXXLRQLREP- 227
           PP L+   PT  +RIIRQSSQPE                             L+QLRE  
Sbjct: 310 PPVLITSSPTNGSRIIRQSSQPESSSTAICCGPHSACVGHAHSHSHTVPNVSLKQLRESS 369

Query: 228 GDGIAGIAADSLRINGGMRPFKQ 250
           GDGIAGIAADSLRINGGMRPFKQ
Sbjct: 370 GDGIAGIAADSLRINGGMRPFKQ 392


>AE014298-731|AAF46029.3|  809|Drosophila melanogaster CG10706-PA,
           isoform A protein.
          Length = 809

 Score = 68.1 bits (159), Expect = 2e-11
 Identities = 43/83 (51%), Positives = 46/83 (55%), Gaps = 13/83 (15%)

Query: 181 PPALLL--PTTSARIIRQSSQPEXXXXXX----------XXXXXXXXXXXXXLRQLREP- 227
           PP L+   PT  +RIIRQSSQPE                             L+QLRE  
Sbjct: 310 PPVLITSSPTNGSRIIRQSSQPESSSTAICCGPHSACVGHAHSHSHTVPNVSLKQLRESS 369

Query: 228 GDGIAGIAADSLRINGGMRPFKQ 250
           GDGIAGIAADSLRINGGMRPFKQ
Sbjct: 370 GDGIAGIAADSLRINGGMRPFKQ 392


>AE014298-730|AAS65264.1|  924|Drosophila melanogaster CG10706-PF,
           isoform F protein.
          Length = 924

 Score = 68.1 bits (159), Expect = 2e-11
 Identities = 43/83 (51%), Positives = 46/83 (55%), Gaps = 13/83 (15%)

Query: 181 PPALLL--PTTSARIIRQSSQPEXXXXXX----------XXXXXXXXXXXXXLRQLREP- 227
           PP L+   PT  +RIIRQSSQPE                             L+QLRE  
Sbjct: 310 PPVLITSSPTNGSRIIRQSSQPESSSTAICCGPHSACVGHAHSHSHTVPNVSLKQLRESS 369

Query: 228 GDGIAGIAADSLRINGGMRPFKQ 250
           GDGIAGIAADSLRINGGMRPFKQ
Sbjct: 370 GDGIAGIAADSLRINGGMRPFKQ 392


>AE014298-729|AAN09136.2|  924|Drosophila melanogaster CG10706-PC,
           isoform C protein.
          Length = 924

 Score = 68.1 bits (159), Expect = 2e-11
 Identities = 43/83 (51%), Positives = 46/83 (55%), Gaps = 13/83 (15%)

Query: 181 PPALLL--PTTSARIIRQSSQPEXXXXXX----------XXXXXXXXXXXXXLRQLREP- 227
           PP L+   PT  +RIIRQSSQPE                             L+QLRE  
Sbjct: 310 PPVLITSSPTNGSRIIRQSSQPESSSTAICCGPHSACVGHAHSHSHTVPNVSLKQLRESS 369

Query: 228 GDGIAGIAADSLRINGGMRPFKQ 250
           GDGIAGIAADSLRINGGMRPFKQ
Sbjct: 370 GDGIAGIAADSLRINGGMRPFKQ 392


>AE014298-658|AAF45971.2|  714|Drosophila melanogaster CG15473-PA
           protein.
          Length = 714

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 4   PTIDSTEAITILDMGSSDETASLP-GRRTRPLPVIVPSENRTVKPVL 49
           P   S E + +L   S   + S+  G     +P+IV  E   VKPVL
Sbjct: 666 PPAPSKEVVEVLTQKSVSRSVSIKVGENGEEIPIIVDDEENEVKPVL 712


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.321    0.133    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,138,087
Number of Sequences: 52641
Number of extensions: 523243
Number of successful extensions: 1092
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1072
Number of HSP's gapped (non-prelim): 21
length of query: 324
length of database: 24,830,863
effective HSP length: 85
effective length of query: 239
effective length of database: 20,356,378
effective search space: 4865174342
effective search space used: 4865174342
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)