GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001529-TA|BGIBMGA001529-PA|undefined
         (324 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   5.0  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   5.0  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 17/69 (24%), Positives = 23/69 (33%)

Query: 101 RPQTLVSPMAGCSHRGSVTACTLVPHSHSRCRVCERRQSTAPVSALQLAXXXXXXXXXXA 160
           RP  +      CS  GS +A  L  H +     C  + ST+  S               A
Sbjct: 227 RPYDISKSPRLCSSNGSSSATPLPLHPYHTDSDCSTQDSTSAPSPATYGDIASPSSASSA 286

Query: 161 LHYPCGCSS 169
           +  P   SS
Sbjct: 287 MTTPATTSS 295


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 17/69 (24%), Positives = 23/69 (33%)

Query: 101 RPQTLVSPMAGCSHRGSVTACTLVPHSHSRCRVCERRQSTAPVSALQLAXXXXXXXXXXA 160
           RP  +      CS  GS +A  L  H +     C  + ST+  S               A
Sbjct: 227 RPYDISKSPRLCSSNGSSSATPLPLHPYHTDSDCSTQDSTSAPSPATYGDIASPSSASSA 286

Query: 161 LHYPCGCSS 169
           +  P   SS
Sbjct: 287 MTTPATTSS 295


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.133    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 289,381
Number of Sequences: 2123
Number of extensions: 10024
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 2
length of query: 324
length of database: 516,269
effective HSP length: 64
effective length of query: 260
effective length of database: 380,397
effective search space: 98903220
effective search space used: 98903220
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 48 (23.4 bits)