Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001529-TA|BGIBMGA001529-PA|undefined
(324 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC042681-1|AAH42681.2| 402|Homo sapiens zinc finger protein 547... 33 1.8
AK055662-1|BAB70979.1| 353|Homo sapiens protein ( Homo sapiens ... 33 1.8
U17838-1|AAC50820.2| 1719|Homo sapiens zinc finger protein RIZ p... 30 9.6
D45132-1|BAA08110.1| 1482|Homo sapiens zinc-finger DNA-binding p... 30 9.6
AL583942-2|CAH70943.1| 1718|Homo sapiens PR domain containing 2,... 30 9.6
AL031277-4|CAI19344.1| 1540|Homo sapiens PR domain containing 2,... 30 9.6
AL031277-3|CAB37643.1| 1481|Homo sapiens PR domain containing 2,... 30 9.6
AL031277-2|CAI19343.1| 1718|Homo sapiens PR domain containing 2,... 30 9.6
AB208877-1|BAD92114.1| 1576|Homo sapiens PR-domain zinc finger p... 30 9.6
>BC042681-1|AAH42681.2| 402|Homo sapiens zinc finger protein 547
protein.
Length = 402
Score = 32.7 bits (71), Expect = 1.8
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 223 QLREPGDGIAGIAADSLRI--NGGMRPFKQGLLLCPQTLSQTRRARLRRAFTEATGDTVT 280
Q +P + + + D LR+ + G P +QGL CP L Q ++ ++R + G T
Sbjct: 84 QNTQPCETCSSLLKDILRLAEHDGTHP-EQGLYTCPAHLHQHQKEQIREKLSRGDGGRPT 142
Query: 281 YVK 283
+VK
Sbjct: 143 FVK 145
>AK055662-1|BAB70979.1| 353|Homo sapiens protein ( Homo sapiens
cDNA FLJ31100 fis, clone IMR321000242, weakly similar to
ZINC FINGER PROTEIN 33A. ).
Length = 353
Score = 32.7 bits (71), Expect = 1.8
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 223 QLREPGDGIAGIAADSLRI--NGGMRPFKQGLLLCPQTLSQTRRARLRRAFTEATGDTVT 280
Q +P + + + D LR+ + G P +QGL CP L Q ++ ++R + G T
Sbjct: 84 QNTQPCETCSSLLKDILRLAEHDGTHP-EQGLYTCPAHLHQHQKEQIREKLSRGDGGRPT 142
Query: 281 YVK 283
+VK
Sbjct: 143 FVK 145
>U17838-1|AAC50820.2| 1719|Homo sapiens zinc finger protein RIZ
protein.
Length = 1719
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 164 PCGCSSLHAVSTCPV-IQPPALLLPTTSARIIRQSSQP 200
P G S+ PV + PA +LP TS+R R++S P
Sbjct: 704 PAGISATEIAKLGPVCVSAPASMLPVTSSRFKRRTSSP 741
>D45132-1|BAA08110.1| 1482|Homo sapiens zinc-finger DNA-binding
protein protein.
Length = 1482
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 164 PCGCSSLHAVSTCPV-IQPPALLLPTTSARIIRQSSQP 200
P G S+ PV + PA +LP TS+R R++S P
Sbjct: 503 PAGISATEIAKLGPVCVSAPASMLPVTSSRFKRRTSSP 540
>AL583942-2|CAH70943.1| 1718|Homo sapiens PR domain containing 2,
with ZNF domain protein.
Length = 1718
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 164 PCGCSSLHAVSTCPV-IQPPALLLPTTSARIIRQSSQP 200
P G S+ PV + PA +LP TS+R R++S P
Sbjct: 703 PAGISATEIAKLGPVCVSAPASMLPVTSSRFKRRTSSP 740
>AL031277-4|CAI19344.1| 1540|Homo sapiens PR domain containing 2,
with ZNF domain protein.
Length = 1540
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 164 PCGCSSLHAVSTCPV-IQPPALLLPTTSARIIRQSSQP 200
P G S+ PV + PA +LP TS+R R++S P
Sbjct: 561 PAGISATEIAKLGPVCVSAPASMLPVTSSRFKRRTSSP 598
>AL031277-3|CAB37643.1| 1481|Homo sapiens PR domain containing 2,
with ZNF domain protein.
Length = 1481
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 164 PCGCSSLHAVSTCPV-IQPPALLLPTTSARIIRQSSQP 200
P G S+ PV + PA +LP TS+R R++S P
Sbjct: 502 PAGISATEIAKLGPVCVSAPASMLPVTSSRFKRRTSSP 539
>AL031277-2|CAI19343.1| 1718|Homo sapiens PR domain containing 2,
with ZNF domain protein.
Length = 1718
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 164 PCGCSSLHAVSTCPV-IQPPALLLPTTSARIIRQSSQP 200
P G S+ PV + PA +LP TS+R R++S P
Sbjct: 703 PAGISATEIAKLGPVCVSAPASMLPVTSSRFKRRTSSP 740
>AB208877-1|BAD92114.1| 1576|Homo sapiens PR-domain zinc finger
protein 2 variant protein.
Length = 1576
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 164 PCGCSSLHAVSTCPV-IQPPALLLPTTSARIIRQSSQP 200
P G S+ PV + PA +LP TS+R R++S P
Sbjct: 561 PAGISATEIAKLGPVCVSAPASMLPVTSSRFKRRTSSP 598
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.321 0.133 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,204,438
Number of Sequences: 224733
Number of extensions: 1567256
Number of successful extensions: 2605
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2605
Number of HSP's gapped (non-prelim): 9
length of query: 324
length of database: 73,234,838
effective HSP length: 90
effective length of query: 234
effective length of database: 53,008,868
effective search space: 12404075112
effective search space used: 12404075112
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)
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