Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001528-TA|BGIBMGA001528-PA|IPR000980|SH2 motif
(665 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16900| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 3e-08
SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 2e-07
SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 52 1e-06
SB_48419| Best HMM Match : SH2 (HMM E-Value=4.6e-13) 50 5e-06
SB_41533| Best HMM Match : SH2 (HMM E-Value=6.3e-25) 49 1e-05
SB_51792| Best HMM Match : SH2 (HMM E-Value=6.3e-24) 48 2e-05
SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-04
SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-04
SB_7446| Best HMM Match : SH2 (HMM E-Value=2.7e-22) 46 1e-04
SB_30777| Best HMM Match : SH2 (HMM E-Value=4e-10) 46 1e-04
SB_58219| Best HMM Match : SOCS_box (HMM E-Value=2e-07) 45 2e-04
SB_40820| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 45 2e-04
SB_34104| Best HMM Match : SH2 (HMM E-Value=1.6e-24) 45 2e-04
SB_6049| Best HMM Match : SH2 (HMM E-Value=8.4e-30) 43 7e-04
SB_13732| Best HMM Match : SH2 (HMM E-Value=3.6e-12) 42 0.001
SB_35674| Best HMM Match : SH2 (HMM E-Value=0) 42 0.002
SB_18647| Best HMM Match : SH2 (HMM E-Value=7.3e-16) 42 0.002
SB_22865| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.003
SB_37681| Best HMM Match : SH2 (HMM E-Value=3.5e-11) 40 0.006
SB_55759| Best HMM Match : SH2 (HMM E-Value=0.082) 37 0.045
SB_34759| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.045
SB_17929| Best HMM Match : SH2 (HMM E-Value=5e-08) 37 0.045
SB_27771| Best HMM Match : SH2 (HMM E-Value=8.6e-16) 36 0.079
SB_15740| Best HMM Match : SH2 (HMM E-Value=8.1e-18) 35 0.18
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 35 0.18
SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0) 34 0.32
SB_8390| Best HMM Match : SH2 (HMM E-Value=0.00091) 34 0.42
SB_42044| Best HMM Match : ubiquitin (HMM E-Value=1.2e-06) 32 1.3
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.2
SB_24482| Best HMM Match : KID (HMM E-Value=0.045) 31 3.0
SB_36274| Best HMM Match : SH2 (HMM E-Value=9.6e-05) 31 3.9
SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.9
SB_8818| Best HMM Match : I-set (HMM E-Value=0) 31 3.9
SB_37750| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.2
SB_22682| Best HMM Match : C1_4 (HMM E-Value=2.2) 30 5.2
SB_48515| Best HMM Match : SH2 (HMM E-Value=3.1) 30 6.9
SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28) 30 6.9
SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 9.1
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 29 9.1
SB_48826| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.1
SB_28410| Best HMM Match : zf-CCCH (HMM E-Value=7.9e-05) 29 9.1
SB_22798| Best HMM Match : Cadherin (HMM E-Value=0) 29 9.1
SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33) 29 9.1
>SB_16900| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 57.6 bits (133), Expect = 3e-08
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Query: 550 PRDLVDATLPLDRQGWYHGTLARVEAESLLRDADEGAFLVRNSESAKHDYSLSLKSTRGF 609
P + L++ WYHG ++R AE LL G+FLVR SES+ S+SL+
Sbjct: 88 PSSYIKPVNSLEKHSWYHGQISRNAAEYLLSSGINGSFLVRESESSPGQLSISLRYDERV 147
Query: 610 MHMRICRGAEGYTLGGASTAFPSVPALMRHY-VTAQRLPVRGAEHMALSTPLPAV 663
H R+ + + F ++ L+ H+ V A L V + A T P V
Sbjct: 148 YHYRVSTSVDNKYYVSSDNRFSTIAELVHHHSVNADGL-VTTLHYPAAKTQEPTV 201
>SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 54.8 bits (126), Expect = 2e-07
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 550 PRDLVDATLPLDRQGWYHGTLARVEAESLL-RDADEGAFLVRNSESAKHDYSLSLKSTRG 608
P + V L + W+ G + RV+AE LL + G+FL+R SES DYSLSL+
Sbjct: 112 PSNYVAPQSSLQSEEWFFGAIRRVDAEKLLIMHGESGSFLIRESESKPGDYSLSLRDGDN 171
Query: 609 FMHMRI-CRGAEGYTLGGASTAFPSVPALMRHY 640
H RI C G+ + + F ++ L+ HY
Sbjct: 172 VKHYRIRCLDNGGFYIAHRA-QFATLIDLVEHY 203
>SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1038
Score = 52.4 bits (120), Expect = 1e-06
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 547 IAPPRDLVDATLPLDRQGWYHGTLARVEAESLLRDADEGAFLVRNSESAKHDYSLSLKST 606
+ PP D+ PL + W+HG + R + + L+ +G +LVR S + + LS +S
Sbjct: 395 VEPPEDI-----PLQDEPWFHGIIQRKDVDKRLK--SDGEYLVRESATKPGQFVLSARSD 447
Query: 607 RGFMHMRICRGAEGYTLGGASTAFPSVPALMRHYVTAQRLPVRGAEHMALSTPL 660
H I +G+ + AFP + L+++++T +PV + +STP+
Sbjct: 448 GALRHFIIQTMEDGF-VRFEEQAFPCIRELLKYHIT-HHIPVTKKSNAMISTPV 499
>SB_48419| Best HMM Match : SH2 (HMM E-Value=4.6e-13)
Length = 274
Score = 50.4 bits (115), Expect = 5e-06
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 559 PLDRQGWYHGTLARVEAESLLRDADE---GAFLVRNSESAKHDYSLSLKSTRGFMHMRIC 615
PL W+HGTL+R+EA L+ + G FL+R SE+ + +Y L+ H+R+
Sbjct: 103 PLAHYPWFHGTLSRIEASQLVSQGSQQWHGIFLIRQSETRRGEYVLTFNYQGRAKHLRLS 162
Query: 616 RGAEGYTLGGASTAFPSVPALMRHY 640
EG FPS+ ++ H+
Sbjct: 163 LNNEG-QCRVQHLWFPSIFEMLEHF 186
>SB_41533| Best HMM Match : SH2 (HMM E-Value=6.3e-25)
Length = 389
Score = 49.2 bits (112), Expect = 1e-05
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 559 PLDRQGWYHGTLARVEAES-LLRDADEGAFLVRNSESAKHDYSLSLKSTRGFMHMRICRG 617
P DR WYHG L R E L D GA+LVR S+ +SLS G +H RI
Sbjct: 50 PDDR--WYHGKLDRKTCEERLAADGRIGAYLVRESDRKPATFSLSYLGKNGIVHFRISNV 107
Query: 618 AEGYTLGGASTAFPSVPALMRHYVT 642
Y +GG F S+ L+ +Y +
Sbjct: 108 CGDYYIGGRQ--FDSLSDLIGYYTS 130
>SB_51792| Best HMM Match : SH2 (HMM E-Value=6.3e-24)
Length = 189
Score = 48.0 bits (109), Expect = 2e-05
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 561 DRQGWYHGTLARVEAESLL--RDADEGAFLVRNSESAKHDYSLSLKSTRGFMHMRI-CRG 617
+ W+HG ++R A +L EG FLVR S++ DY LSL +T +H +I CRG
Sbjct: 5 NEHAWFHGEMSREAAVDILVKHGKKEGLFLVRESKTIPGDYVLSLWTTNQALHFQIQCRG 64
Query: 618 AEGYTLGGASTAFPSVPALMRHY-VTAQRLPVR 649
+ Y F + +L+ +Y A LP+R
Sbjct: 65 -DIYFCIDDGPIFHGLDSLVDYYRENADGLPIR 96
>SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 46.0 bits (104), Expect = 1e-04
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 550 PRDLVDATLPLDRQGWYHGTLARVEAESLLRDA--DEGAFLVRNSESAKHDYSLSLKSTR 607
P + V L+ + W++G + R EAE LL+ + GAFL+R+S K ++LS++
Sbjct: 121 PMNYVAPMETLEAEEWFYGPIKRPEAEKLLQSPPNEHGAFLIRDSN--KGLFALSMRDGD 178
Query: 608 GFMHMRICRGAEGYTLGGASTAFPSVPALMRHY 640
H RI + G + F S+ L+ HY
Sbjct: 179 MIKHYRIRKSDTGGFFISHNNVFTSLKDLVAHY 211
>SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 46.0 bits (104), Expect = 1e-04
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 550 PRDLVDATLPLDRQGWYHGTLARVEAES-LLRDAD-EGAFLVRNSESAKHDYSLSLKSTR 607
P + V + + Q W+ G + R EAE LL + +G FL+R+SE+ ++SLS++
Sbjct: 127 PSNYVAPEMSVKSQDWFFGKIKRAEAEKKLLAPGNPKGTFLIRDSETQPGNFSLSVRDGD 186
Query: 608 GFMHMRICRGAEGYTLGGASTAFPSVPALMRHYV 641
H RI + G F S+ L+ HY+
Sbjct: 187 NVKHYRIRKLDTGGFYITTRAPFGSLTELVDHYM 220
>SB_7446| Best HMM Match : SH2 (HMM E-Value=2.7e-22)
Length = 699
Score = 45.6 bits (103), Expect = 1e-04
Identities = 29/59 (49%), Positives = 34/59 (57%), Gaps = 9/59 (15%)
Query: 544 LGPIAPPRDLVDATLPLDRQGWYHGTLARVEAESLLRDADEGAFLVRNSESAKHDYSLS 602
L P APP LV ++ WYHG ++R EAE LL DEG FLVR S+S Y LS
Sbjct: 435 LPPQAPPDSLV-------QKDWYHGPISRGEAELLLE--DEGDFLVRESKSQPGQYVLS 484
>SB_30777| Best HMM Match : SH2 (HMM E-Value=4e-10)
Length = 265
Score = 45.6 bits (103), Expect = 1e-04
Identities = 26/95 (27%), Positives = 46/95 (48%)
Query: 551 RDLVDATLPLDRQGWYHGTLARVEAESLLRDADEGAFLVRNSESAKHDYSLSLKSTRGFM 610
RDL + L QGW+ G + +AE +L +G+FLVR+S ++ +S++S +
Sbjct: 157 RDLSRGFMNLSEQGWFWGAMRYEDAEQVLAGRPDGSFLVRDSTNSFDLLVVSVRSQSTTI 216
Query: 611 HMRICRGAEGYTLGGASTAFPSVPALMRHYVTAQR 645
H+R+ + L + SV L+ + R
Sbjct: 217 HVRVMYTNGCFHLSHGDQGYESVVELIESVMEVSR 251
>SB_58219| Best HMM Match : SOCS_box (HMM E-Value=2e-07)
Length = 507
Score = 45.2 bits (102), Expect = 2e-04
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 551 RDLVDATLPLDRQGWYHGTLARVEAESLLRDADEGAFLVRNSESAKHDYSLSLKSTRGFM 610
R L + L GWY G ++ EAE L + +G FLVR+SE+ H S+S +S
Sbjct: 331 RRLSSSLKTLSNCGWYWGPMSSKEAEKELYNQPDGCFLVRDSENDYHLLSVSFRSKGATC 390
Query: 611 HMRI 614
H R+
Sbjct: 391 HTRL 394
>SB_40820| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 526
Score = 45.2 bits (102), Expect = 2e-04
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 542 LNLGPIAPPRDLVDATLPLDRQGWYHGTLARVEAESLLRDADEGAFLVRNSESAKHDYSL 601
+ L P+ + L + L W+HG + R ++E LL+ +G FLVR S + DY+L
Sbjct: 180 IGLIPVNYVQVLERGAVKLHAMPWFHGKIEREKSEELLQPRTDGLFLVRESRNYVGDYTL 239
Query: 602 SLKSTRGFMHMRICRGAEGYTLGGASTAFPSVPALMRHY 640
S+ H R+ T+ F ++ L+ HY
Sbjct: 240 SVCCNGKVEHYRVIFKDNMLTV-DEEEYFENLTKLVEHY 277
>SB_34104| Best HMM Match : SH2 (HMM E-Value=1.6e-24)
Length = 421
Score = 44.8 bits (101), Expect = 2e-04
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 563 QGWYHGTLARVEAESLLRDAD--EGAFLVRNSESAKHDYSLSLKSTRGFMHMRICRGAEG 620
Q ++HG ++R +AE LL A +G +LVR S Y+LS+ + +H +I R A+G
Sbjct: 8 QPYFHGCISRFKAEELLARAGKRDGLYLVRESAHQLGSYALSMCNNHKVIHYQILRHADG 67
Query: 621 YTLGGASTAFPSVPALMRHY 640
FP L++H+
Sbjct: 68 KVGIEDGPRFPGPVELVQHH 87
>SB_6049| Best HMM Match : SH2 (HMM E-Value=8.4e-30)
Length = 94
Score = 43.2 bits (97), Expect = 7e-04
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 565 WYHGTLARVEAESLLRDA--DEGAFLVRNSESAKHDYSLSLKSTRGFMHMRICRGAEGYT 622
W++G + R EAE LL+ + GAFL+R+S K ++LS++ H RI + G
Sbjct: 2 WFYGPIKRPEAEKLLQSPPNEHGAFLIRDSN--KGLFALSMRDGDMIKHYRIRKSDTGGF 59
Query: 623 LGGASTAFPSVPALMRHY 640
+ F S+ L+ HY
Sbjct: 60 FISHNNVFTSLKDLVAHY 77
>SB_13732| Best HMM Match : SH2 (HMM E-Value=3.6e-12)
Length = 135
Score = 42.3 bits (95), Expect = 0.001
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 560 LDRQGWYHGTLARVEAESLLRDA--DEGAFLVRNSESAKHDYSLSLKSTRGFMHMRICR- 616
L + W+HG ++ EA L++ ++G FLVR S S Y L+ + H ++ +
Sbjct: 22 LAEEFWFHGRISHDEALVLMKREGFEDGLFLVRESCSVSDVYVLTFCMNKKVFHCQLVQD 81
Query: 617 ---GAEGYTLGGASTAFPSVPALMRHYVTAQRLPVRGAEHMALSTP 659
G++ Y AFPS+ L+R+Y QR V G +AL P
Sbjct: 82 IGPGSKMYYRLDKGPAFPSILELIRYY---QRKTVNGIS-VALGRP 123
>SB_35674| Best HMM Match : SH2 (HMM E-Value=0)
Length = 871
Score = 41.5 bits (93), Expect = 0.002
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 565 WYHGTLARVEAESLLRDAD-EGAFLVRNSESAKHDYSLSLKSTRGFMHMRICRGAEGYTL 623
W+H ++ +AE LL + G++LVR S+S D++LS++ H++I + Y L
Sbjct: 480 WFHSNVSGHDAERLLIERGLHGSYLVRPSKSNPGDFTLSVRRNGDVTHIKIQNTGDYYDL 539
Query: 624 GGASTAFPSVPALMRHY 640
G F ++ L+++Y
Sbjct: 540 YGGE-KFATLSELIQYY 555
Score = 36.7 bits (81), Expect = 0.060
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 574 EAESLLRDADE-GAFLVRNSESAKHDYSLSLKSTRGFMHMRICRGAEG-YTLGGASTAFP 631
E E++L D + G+FLVR S+S DY L+ + H+ I G Y +GG F
Sbjct: 587 EGETVLLDKGKNGSFLVRESQSKPGDYVLTARCDDRITHVMIRNHPNGKYDVGGGE-MFE 645
Query: 632 SVPALMRHY 640
+ L+ HY
Sbjct: 646 DLTDLVEHY 654
>SB_18647| Best HMM Match : SH2 (HMM E-Value=7.3e-16)
Length = 720
Score = 41.5 bits (93), Expect = 0.002
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 565 WYHGTLARVEAESLLRDADE-GAFLVRNSESAKHDYSLSLKSTRGFMHMRICRGAEG 620
W+H + R+E E LL E G FL+R+SES + + LS+ H RI R +G
Sbjct: 5 WHHKAINRLETEKLLLGCGEDGGFLIRDSESIPNAFVLSILFQGHIHHYRILREKDG 61
>SB_22865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 41.1 bits (92), Expect = 0.003
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 560 LDRQGWYHGTLARVEAESLLRDA--DEGAFLVRNSESAKHDYSLSLKSTRGFMHMRICR- 616
L + W+HG ++ EA L++ ++G FLVR S S Y L+ + H ++ +
Sbjct: 22 LAEEFWFHGRISHDEALVLMKREGFEDGLFLVRESCSVSDVYVLTFCMNKKVFHCQLVQD 81
Query: 617 ---GAEGYTLGGASTAFPSVPALMRHYVTAQRLPVRG 650
G++ Y AFPS+ L+R+Y QR V G
Sbjct: 82 IGPGSKMYYRLDKGPAFPSILELIRYY---QRKTVNG 115
>SB_37681| Best HMM Match : SH2 (HMM E-Value=3.5e-11)
Length = 421
Score = 39.9 bits (89), Expect = 0.006
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 565 WYHGTLARVEAESLLRDADEGAFLVRNSESAKHDYSLSLKSTRGFMHMRICRGAEGYTLG 624
WY G + R EAE +L +G FL+R+S ++ +S+S + H RI + Y+
Sbjct: 258 WYWGKINRFEAERVLDGLPDGTFLLRDSAQYQYLFSVSFRRYFRTYHARIEQWKHRYSFD 317
Query: 625 GAST-AFPS--VPALMRHYVTAQR 645
S +F S + L++HY A++
Sbjct: 318 KPSDYSFCSKTLHELLQHYSQAEQ 341
>SB_55759| Best HMM Match : SH2 (HMM E-Value=0.082)
Length = 42
Score = 37.1 bits (82), Expect = 0.045
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 565 WYHGTLARVEAESLLRDADE-GAFLVRNSESAKHDYSLS 602
W+HG ++ E E++L D + G+FLVR S+S DY L+
Sbjct: 2 WFHGHMSSKEGETVLLDKGKNGSFLVRESQSKPGDYVLT 40
>SB_34759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 633
Score = 37.1 bits (82), Expect = 0.045
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 565 WYHGTLARVEAESLLRDADEGAFLVRNSESAKHDYSLSLK-----STRGFMHMRICRGAE 619
WY + R +L+ ++EG+F VR+S+S ++L+++ GF + I E
Sbjct: 501 WYMPGIPREFIMEMLQASEEGSFFVRDSQSKPGCHALTVRVPTEVHASGFGNYLITPIPE 560
Query: 620 GYTLGGASTAFPSVPALMRHY-VTAQRLPVR 649
G L G S F + +L+ +Y A LP R
Sbjct: 561 GVKLEGFSRTFTDLVSLIEYYSYHADGLPCR 591
>SB_17929| Best HMM Match : SH2 (HMM E-Value=5e-08)
Length = 170
Score = 37.1 bits (82), Expect = 0.045
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 565 WYHGTLARVEAESLLRDADEGAFLVRNSESAKHDYSLSLK-----STRGFMHMRICRGAE 619
WY + R +L+ ++EG+F VR+S+S ++L+++ GF + I E
Sbjct: 38 WYMPGIPREFIMEMLQASEEGSFFVRDSQSKPGCHALTVRVPTEVHASGFGNYLITPIPE 97
Query: 620 GYTLGGASTAFPSVPALMRHY-VTAQRLPVR 649
G L G S F + +L+ +Y A LP R
Sbjct: 98 GVKLEGFSRTFTDLVSLIEYYSYHADGLPCR 128
>SB_27771| Best HMM Match : SH2 (HMM E-Value=8.6e-16)
Length = 896
Score = 36.3 bits (80), Expect = 0.079
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 584 EGAFLVRNSESAKHDYSLSLKSTRGFMHMRICRGAEGYTLGGAS-TAFPSVPALMRHY 640
+GAFLVRNS +DYS+SL H++I Y LG + F ++ L+ +Y
Sbjct: 269 DGAFLVRNSTRHPNDYSMSLLYKGDVRHLKIPEKDGKYILGDSGLEKFNTIVDLVNYY 326
>SB_15740| Best HMM Match : SH2 (HMM E-Value=8.1e-18)
Length = 453
Score = 35.1 bits (77), Expect = 0.18
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 566 YHGTLARVEAESLLRDAD---EGAFLVRNSESAKHDYSLSLKSTRGFMHMRI 614
+HG ++R + LL A G FLVR S SA DYSLSL H R+
Sbjct: 59 FHGKISREQVVELLTGAGGTVNGRFLVRESLSAPGDYSLSLTFGGEVEHYRL 110
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 35.1 bits (77), Expect = 0.18
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 565 WYHGTLARVEAESLLRDADEGAFLVRNSESAKHDYSLSLKSTRGFMHMRICRGAEGYT-L 623
++HG ++R +AE +L D G+FLVR SE Y+++ ++ H + + Y
Sbjct: 803 YFHGIISRQDAEQVLLDKVPGSFLVRVSERV-WGYTITYRAEERCKHYLVDTSEQTYQFF 861
Query: 624 GGASTAFPSVPALMRHYVTAQRLPVRGAEHMALSTP 659
G A P++ L+ + P+ G L P
Sbjct: 862 GHNQIAHPTLNDLIEFHKVR---PISGMGQELLKIP 894
>SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 824
Score = 34.3 bits (75), Expect = 0.32
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 558 LPLDRQGWYHGTLARVEAES-LLRDADEGAFLVRNSESAK 596
LP Q W+ G ++R + E LL +G FLVR SE+ K
Sbjct: 369 LPFVNQEWFWGRISRRQGEQLLLNHGTDGDFLVRESETTK 408
>SB_8390| Best HMM Match : SH2 (HMM E-Value=0.00091)
Length = 396
Score = 33.9 bits (74), Expect = 0.42
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 565 WYHGTLARVEAESLLRDADEGAFLVRNSESAKHD--YSLSLKS-TRGFMHMRICRGAEGY 621
W+ G + E+E LLRD G FL+R S S D + L++K+ G + ++I R
Sbjct: 330 WFAGHMDETESERLLRDLSPGHFLIRFSTSRADDGFFVLAVKTRDNGVVQVQIERVEVSG 389
Query: 622 TLGG 625
GG
Sbjct: 390 NQGG 393
>SB_42044| Best HMM Match : ubiquitin (HMM E-Value=1.2e-06)
Length = 1425
Score = 32.3 bits (70), Expect = 1.3
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 556 ATLPLDRQGWYHGTLARVEAESLLRDADEGAFLVRNSESAKHDYSLSLKS-TRGFMHMRI 614
A L++ W+HG + AE L+R A G FLVR + Y +++++ + +H+ I
Sbjct: 309 AARQLEKSPWFHGKITAEYAEMLMRGA--GEFLVREDPAMPGMYFIAVRNKEQETLHLAI 366
Query: 615 CR 616
+
Sbjct: 367 TK 368
>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 31.5 bits (68), Expect = 2.2
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 551 RDLVDATLPLDRQGWYHG--TLARVEA-ESLLRDADEGAFLVRNSESAKHDYSLSLKSTR 607
RD D T + + G TL +EA + +RD ++G F+VR+S+ +Y+L+L
Sbjct: 358 RDTEDGTFIVRDSKRFPGEYTLTLMEAVNARMRDTEDGTFIVRDSKRFPGEYTLTLMKGG 417
Query: 608 GFMHMRICRGAEGYTLGGASTAFPSVPALMRHY 640
+RI Y T F SV L+ +Y
Sbjct: 418 VIKLIRIMYKDGKYGFSEPLT-FKSVIDLVSYY 449
>SB_24482| Best HMM Match : KID (HMM E-Value=0.045)
Length = 1714
Score = 31.1 bits (67), Expect = 3.0
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Query: 332 PAKLNILSPISDKSSQEPASETSDNNKNNNSQKVSPEEGDTGNATIQTAVEIIAKPK 388
P +LS ++D S + NKN S K+ E+ + N+ A EI KPK
Sbjct: 80 PTSNTLLSKMADTSKDQKGQ-----NKNEESIKIRKEKNEAKNSETSAASEIAEKPK 131
>SB_36274| Best HMM Match : SH2 (HMM E-Value=9.6e-05)
Length = 292
Score = 30.7 bits (66), Expect = 3.9
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 565 WYHGTLARVEAESLLRDADEGAFLVRNSESAKHDYSLSLKSTRGFM-HMRICRGAEGYTL 623
W ++R EAE LL ++D G+F+ S + +SL S ++ H I GY +
Sbjct: 46 WNPFQISRKEAEDLLLNSDPGSFVF--SHDLASELFISLSSVGKYVCHHAIMSRDHGYYI 103
Query: 624 GGASTAFPSVPALMRHY 640
G + F SV ++ +Y
Sbjct: 104 G--AMRFESVGDVIAYY 118
>SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 30.7 bits (66), Expect = 3.9
Identities = 34/166 (20%), Positives = 67/166 (40%), Gaps = 10/166 (6%)
Query: 32 PALLQAEERKIISSASSAFEAVERSEPDFKGR-RKVTMKTDSVRRSKIPTIRQKRENENN 90
PAL RK+++S + +++ D G K+ D +R++K Q + E+
Sbjct: 360 PALSPTLMRKVMTSRVNKINQLDKEVIDMGGEITKIKKPNDELRKTKKKMQVQYEKLEHQ 419
Query: 91 ACALSEELEKVHIEGEERVASNSQLPLRGYXXXXXXXXXXXXKFQQKDGSAMNSIKSAPN 150
L KV ++ ++ V ++ + Y +D S S S P
Sbjct: 420 LDDL-----KVQLKRKDVVIADLNKVVEDYKRKESYGLFRESS--SEDSSP--STTSTPE 470
Query: 151 LPQAQPAHPRLKDLRLPVKSLRARDTPTSSDASMDVKGSVSTELDI 196
+ +P H R K+ + VK + ++ T+S S + + + +I
Sbjct: 471 SFEEKPKHARNKEKKKEVKKKKGKEKSTTSGTSKKSEAEIQEKKEI 516
>SB_8818| Best HMM Match : I-set (HMM E-Value=0)
Length = 2787
Score = 30.7 bits (66), Expect = 3.9
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 559 PLDRQGWYHGTLARVEAE--SLLRDADEGAFLVRNSESAKHD 598
P R WYHGT +E +L D+ F + ++S +HD
Sbjct: 1763 PKPRVAWYHGTTKLIEGTIYKMLEDSGNHTFTLIVNDSQRHD 1804
>SB_37750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 759
Score = 30.3 bits (65), Expect = 5.2
Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
Query: 336 NILSPISDKSSQEPASETSDNNKNNNSQKVSPE-EGDTGNATIQTAV-EIIAKPKXXXXX 393
N +S + DK Q+ S T+D + +QK +P+ G+ I+ AV EI +
Sbjct: 263 NKISHLEDKLVQQSNSFTADIKRKTQAQKKTPKTRGNNAMRLIKDAVFEIPTANRFTPLQ 322
Query: 394 XXXXXXXTFRHSATGDAEIQGSDSGISIHSREGVDSRNAFINFKNSNT 441
+ +H + + D + + R RN + +SN+
Sbjct: 323 SGQSSPTSAQHPSDNSTRDRSQDRPRTRYERNHAGKRNHVVFLADSNS 370
>SB_22682| Best HMM Match : C1_4 (HMM E-Value=2.2)
Length = 321
Score = 30.3 bits (65), Expect = 5.2
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 415 SDSGISIHSREGVDSRNAFINFKNSNTGEERKNDDVDLSDLPFDMPK 461
S+ + + +DS + I+FKN + E +DDV+ FD+P+
Sbjct: 57 SEDEDGVEEDKTLDSLSEVISFKNDASHSEEADDDVEFFKSVFDVPE 103
>SB_48515| Best HMM Match : SH2 (HMM E-Value=3.1)
Length = 40
Score = 29.9 bits (64), Expect = 6.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 566 YHGTLARVEAESLLRDADEGAFLVRNSESAKHDYSLSL 603
+ G + R EAE +G FLVR S + +Y+LS+
Sbjct: 2 FAGKMDRTEAEQETMGRSDGTFLVRESANRAGEYALSV 39
>SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28)
Length = 1643
Score = 29.9 bits (64), Expect = 6.9
Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 2/128 (1%)
Query: 69 KTDSVRRSKIPTIR-QKRENENNACALSEELEKVHIEGEERVASNSQLP-LRGYXXXXXX 126
+TD ++ K Q+ + +S + E I+G+E V+S+ + ++G
Sbjct: 1233 ETDKIKGEKECLFSDQETDKTKERKEVSSDQETGKIKGQEEVSSDQETGNIKGEKERFFS 1292
Query: 127 XXXXXXKFQQKDGSAMNSIKSAPNLPQAQPAHPRLKDLRLPVKSLRARDTPTSSDASMDV 186
+KD S + L Q + K+L+ + RA D P SMD+
Sbjct: 1293 DQETGKIKGRKDSSFSDQNTDIAVLSFEQGTCSKPKELKDNAEVKRAADFPNEPQQSMDI 1352
Query: 187 KGSVSTEL 194
+ STE+
Sbjct: 1353 EYGNSTEV 1360
>SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1080
Score = 29.5 bits (63), Expect = 9.1
Identities = 24/103 (23%), Positives = 38/103 (36%), Gaps = 2/103 (1%)
Query: 345 SSQEPASETSDNNKNNNSQKVSPEEGDTGNATIQTAVEIIAK-PKXXXXXXXXXXXXTFR 403
++Q A E + + + Q+ S EG N I I + P T
Sbjct: 326 TAQASAQEGHEQQQASQMQQ-SGSEGTPINLNIDLPSIISSDAPTMASSTTTTTSKTTLE 384
Query: 404 HSATGDAEIQGSDSGISIHSREGVDSRNAFINFKNSNTGEERK 446
A G SD S +S++G D R+ + + E+RK
Sbjct: 385 KGAAGSKTADTSDKATSDNSQKGSDKRSGEASKDGTGAAEKRK 427
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 29.5 bits (63), Expect = 9.1
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 7/109 (6%)
Query: 14 KIARSXXXXXXXXRVSNHPALLQ--AEERKIISSASSAFEAVERSEPDFKGR-----RKV 66
K R+ + H LQ AE +++I +A+ ++ D K RK
Sbjct: 31 KTVRTYTSKSASGGLGGHDVSLQQIAEAKEVIGDMEAAYRQLKAMLEDQKKEHMAEVRKF 90
Query: 67 TMKTDSVRRSKIPTIRQKRENENNACALSEELEKVHIEGEERVASNSQL 115
+ D +RR K Q R+++ + L +EL V E+ N L
Sbjct: 91 QREIDDLRRQKRSLEDQLRDSKGDNKRLQDELNMVRRRLLEKETENESL 139
>SB_48826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 29.5 bits (63), Expect = 9.1
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 338 LSPISD-KSSQEPASETSDNNKNNNSQKVSPEEGDTGNATIQTAVEII 384
LS SD ++ S ++NN NNN+ S +T +AT+ T+ I
Sbjct: 64 LSNSSDINNNNTTTSNNNNNNNNNNNNSSSSSNNNTISATVATSTTTI 111
>SB_28410| Best HMM Match : zf-CCCH (HMM E-Value=7.9e-05)
Length = 905
Score = 29.5 bits (63), Expect = 9.1
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 57 EPDFKGRRKVTMKTDSVRRSKIPTIRQKRENENNACALSEELEKVHIEGEERVASNSQLP 116
E DF+ RK T ++ R+ IP R+KR + + + ++ K + ++ + N+ L
Sbjct: 114 ERDFRRTRKNTDPSNKPNRNSIPVDRRKRRADEDIRTDNHKIAKEDLNTKQNDSENASLD 173
Query: 117 L 117
+
Sbjct: 174 I 174
>SB_22798| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3255
Score = 29.5 bits (63), Expect = 9.1
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 560 LDRQGWYHGTLARVEAESLL--RDADEGAFLVRNSESAKHDYSLSLKSTRG 608
++ WY+G + EAE LL G F++ + A +Y+L++K+ G
Sbjct: 2941 IEHAPWYYGNMNTTEAEELLEVHALQPGTFILHDG-IATDEYTLTVKAPEG 2990
>SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33)
Length = 997
Score = 29.5 bits (63), Expect = 9.1
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 565 WYHGTL--ARVEAESLLRDAD--EGAFLVRNSESAKHDYSLS 602
W+HG L R AE L + +G+FLVR S + D+SLS
Sbjct: 53 WFHGKLPDGRRVAEQYLNQFNRGDGSFLVRESTTFVGDFSLS 94
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.130 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,077,681
Number of Sequences: 59808
Number of extensions: 650352
Number of successful extensions: 2511
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2468
Number of HSP's gapped (non-prelim): 52
length of query: 665
length of database: 16,821,457
effective HSP length: 87
effective length of query: 578
effective length of database: 11,618,161
effective search space: 6715297058
effective search space used: 6715297058
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
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