GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001528-TA|BGIBMGA001528-PA|IPR000980|SH2 motif
         (665 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          40   2e-04
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    27   1.6  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    25   4.9  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 39.9 bits (89), Expect = 2e-04
 Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 3/104 (2%)

Query: 504  NASSSQSVEDLNQGNKLKSSLKLNFDXXXXXXXXKGLHLNLGPIAPPRDLVDATLPLDRQ 563
            N +  ++ +DL  GN+ ++   +N +        +         + P+++    +   R 
Sbjct: 1155 NPAYQRTTKDLFSGNQQRTQELVNQNETLSCYTSRRNSTTSNANSEPQEVAPQFVKFARD 1214

Query: 564  G---WYHGTLARVEAESLLRDADEGAFLVRNSESAKHDYSLSLK 604
                WY   ++R EA +LLR+A  G F+VR+S +  + Y L +K
Sbjct: 1215 SSKYWYKPNISREEAIALLRNAAPGTFIVRDSTTFANAYGLVVK 1258


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
            symporter protein.
          Length = 1127

 Score = 27.1 bits (57), Expect = 1.6
 Identities = 18/49 (36%), Positives = 22/49 (44%)

Query: 552  DLVDATLPLDRQGWYHGTLARVEAESLLRDADEGAFLVRNSESAKHDYS 600
            DLV  TLP+ R+G     L     E+L RD     F+  N  S    YS
Sbjct: 1079 DLVVMTLPMPRKGVVSAPLYMAWLEALSRDLPPFLFVRGNQTSVLTFYS 1127


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 25.4 bits (53), Expect = 4.9
 Identities = 10/30 (33%), Positives = 19/30 (63%)

Query: 345 SSQEPASETSDNNKNNNSQKVSPEEGDTGN 374
           +S+ P++ T+  N NNN+   SP++  T +
Sbjct: 129 ASEGPSTGTNVINNNNNNSTTSPQDLSTAS 158


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.130    0.366 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,023
Number of Sequences: 2123
Number of extensions: 18928
Number of successful extensions: 41
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38
Number of HSP's gapped (non-prelim): 3
length of query: 665
length of database: 516,269
effective HSP length: 68
effective length of query: 597
effective length of database: 371,905
effective search space: 222027285
effective search space used: 222027285
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 51 (24.6 bits)