Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001526-TA|BGIBMGA001526-PA|undefined
         (137 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC115386-1|AAI15387.1|  495|Homo sapiens HSF5 protein protein.         32   0.58 
BC115385-1|AAI15386.1|  475|Homo sapiens HSF5 protein protein.         32   0.58 
BC033020-1|AAH33020.1|  596|Homo sapiens heat shock transcriptio...    32   0.58 
BC033017-1|AAH33017.1|  596|Homo sapiens heat shock transcriptio...    32   0.58 
AK097630-1|BAC05124.1|  278|Homo sapiens protein ( Homo sapiens ...    32   0.58 
AC007766-1|AAD38076.1|  430|Homo sapiens R26610_1 protein.             29   4.1  

>BC115386-1|AAI15387.1|  495|Homo sapiens HSF5 protein protein.
          Length = 495

 Score = 32.3 bits (70), Expect = 0.58
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 21  GTSQEVASSVPQEAEYQNIHTLRTADLIRQRQGEEKSTLRSSYI 64
           GT Q VA S+PQ  EY  I+T+ TA  +     +E + ++ +++
Sbjct: 344 GTEQAVACSLPQSPEY--IYTIHTAQPVENSTIQESAAIQQAHV 385


>BC115385-1|AAI15386.1|  475|Homo sapiens HSF5 protein protein.
          Length = 475

 Score = 32.3 bits (70), Expect = 0.58
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 21  GTSQEVASSVPQEAEYQNIHTLRTADLIRQRQGEEKSTLRSSYI 64
           GT Q VA S+PQ  EY  I+T+ TA  +     +E + ++ +++
Sbjct: 324 GTEQAVACSLPQSPEY--IYTIHTAQPVENSTIQESAAIQQAHV 365


>BC033020-1|AAH33020.1|  596|Homo sapiens heat shock transcription
           factor family member 5 protein.
          Length = 596

 Score = 32.3 bits (70), Expect = 0.58
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 21  GTSQEVASSVPQEAEYQNIHTLRTADLIRQRQGEEKSTLRSSYI 64
           GT Q VA S+PQ  EY  I+T+ TA  +     +E + ++ +++
Sbjct: 445 GTEQAVACSLPQSPEY--IYTIHTAQPVENSTIQESAAIQQAHV 486


>BC033017-1|AAH33017.1|  596|Homo sapiens heat shock transcription
           factor family member 5 protein.
          Length = 596

 Score = 32.3 bits (70), Expect = 0.58
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 21  GTSQEVASSVPQEAEYQNIHTLRTADLIRQRQGEEKSTLRSSYI 64
           GT Q VA S+PQ  EY  I+T+ TA  +     +E + ++ +++
Sbjct: 445 GTEQAVACSLPQSPEY--IYTIHTAQPVENSTIQESAAIQQAHV 486


>AK097630-1|BAC05124.1|  278|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40311 fis, clone TESTI2029785. ).
          Length = 278

 Score = 32.3 bits (70), Expect = 0.58
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 21  GTSQEVASSVPQEAEYQNIHTLRTADLIRQRQGEEKSTLRSSYI 64
           GT Q VA S+PQ  EY  I+T+ TA  +     +E + ++ +++
Sbjct: 127 GTEQAVACSLPQSPEY--IYTIHTAQPVENSTIQESAAIQQAHV 168


>AC007766-1|AAD38076.1|  430|Homo sapiens R26610_1 protein.
          Length = 430

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 12/35 (34%), Positives = 22/35 (62%)

Query: 21  GTSQEVASSVPQEAEYQNIHTLRTADLIRQRQGEE 55
           GT Q+V     QE+ +++I   R++D +R+  GE+
Sbjct: 73  GTPQQVKDKTLQESSFEDIMATRSSDWLRRPLGED 107


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.316    0.130    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,741,675
Number of Sequences: 224733
Number of extensions: 541262
Number of successful extensions: 4465
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 4464
Number of HSP's gapped (non-prelim): 6
length of query: 137
length of database: 73,234,838
effective HSP length: 82
effective length of query: 55
effective length of database: 54,806,732
effective search space: 3014370260
effective search space used: 3014370260
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)