GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001526-TA|BGIBMGA001526-PA|undefined
         (137 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00005F7942 Cluster: COG2931: RTX toxins and related ...    34   0.90 
UniRef50_Q4S222 Cluster: Chromosome undetermined SCAF14764, whol...    34   1.2  
UniRef50_UPI00006A0FEF Cluster: Homeobox protein cut-like 2 (Hom...    33   2.1  
UniRef50_UPI000065DBBF Cluster: Homolog of Homo sapiens "Splice ...    32   3.6  
UniRef50_Q4G112 Cluster: Heat shock factor protein 5; n=18; Amni...    32   3.6  
UniRef50_Q9W596 Cluster: Microtubule-associated protein futsch; ...    32   3.6  
UniRef50_Q47U66 Cluster: Glycosyl transferase, group 1 family pr...    31   8.4  

>UniRef50_UPI00005F7942 Cluster: COG2931: RTX toxins and related
           Ca2+-binding proteins; n=1; Yersinia bercovieri ATCC
           43970|Rep: COG2931: RTX toxins and related Ca2+-binding
           proteins - Yersinia bercovieri ATCC 43970
          Length = 1126

 Score = 34.3 bits (75), Expect = 0.90
 Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 3/82 (3%)

Query: 35  EYQNIHTLRTADLIRQRQGEEKSTLRSSYIIRNGDNFILV---EXXXXXXXXXXXXXXXX 91
           EY     +R     +  +  +K  L   YII+  DN IL+                    
Sbjct: 639 EYHESGVIRLKGAYKTNEAGDKKVLSHHYIIQTADNLILLPEWPQTLDIAENKLPLSLKM 698

Query: 92  XXHHTPPVEESTRTEQKRRRPP 113
             H+ P VE  T+ E K+  PP
Sbjct: 699 NAHYNPMVEYLTQAENKQSEPP 720


>UniRef50_Q4S222 Cluster: Chromosome undetermined SCAF14764, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF14764,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 1556

 Score = 33.9 bits (74), Expect = 1.2
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 10  LHSSRKKRDGSGTSQEVASSVPQEAEYQNIHTLRTADLIRQRQGE-EKSTLR 60
           LHS  ++  GS ++ E  S+  +E      HTL TA+  +Q+ GE E+ T R
Sbjct: 443 LHSLEEQLQGSSSAVENTSNTARETNQLTAHTLATANQAQQKLGEVERRTER 494


>UniRef50_UPI00006A0FEF Cluster: Homeobox protein cut-like 2 (Homeobox
            protein Cux-2) (Cut-like 2).; n=7; Euteleostomi|Rep:
            Homeobox protein cut-like 2 (Homeobox protein Cux-2)
            (Cut-like 2). - Xenopus tropicalis
          Length = 1477

 Score = 33.1 bits (72), Expect = 2.1
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 6    RRVGLHSSRKKRDGSGTSQEVASSVPQEAEYQNIHTLRTADLIRQRQGEEKSTLRSSY 63
            RR GL S     + S T  E AS  PQ  EY ++   +   ++     EEK TL+ +Y
Sbjct: 1156 RRYGLISGGSDSESSNTKTECASPSPQPQEYSHLQMKKPRVVLGL---EEKETLKKAY 1210


>UniRef50_UPI000065DBBF Cluster: Homolog of Homo sapiens "Splice
          Isoform 1 of Mitogen-activated protein kinase kinase
          kinase kinase 4; n=1; Takifugu rubripes|Rep: Homolog of
          Homo sapiens "Splice Isoform 1 of Mitogen-activated
          protein kinase kinase kinase kinase 4 - Takifugu
          rubripes
          Length = 549

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 15/48 (31%), Positives = 26/48 (54%)

Query: 15 KKRDGSGTSQEVASSVPQEAEYQNIHTLRTADLIRQRQGEEKSTLRSS 62
          + +DGS TSQ+ + S+P + E+  I      D  +Q Q  + +  RS+
Sbjct: 34 QNQDGSKTSQQQSGSLPHKLEHDRIKNSPEPDAAKQPQSPDNTGTRSN 81


>UniRef50_Q4G112 Cluster: Heat shock factor protein 5; n=18;
           Amniota|Rep: Heat shock factor protein 5 - Homo sapiens
           (Human)
          Length = 596

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 21  GTSQEVASSVPQEAEYQNIHTLRTADLIRQRQGEEKSTLRSSYI 64
           GT Q VA S+PQ  EY  I+T+ TA  +     +E + ++ +++
Sbjct: 445 GTEQAVACSLPQSPEY--IYTIHTAQPVENSTIQESAAIQQAHV 486


>UniRef50_Q9W596 Cluster: Microtubule-associated protein futsch; n=6;
            melanogaster subgroup|Rep: Microtubule-associated protein
            futsch - Drosophila melanogaster (Fruit fly)
          Length = 5412

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 18/60 (30%), Positives = 27/60 (45%)

Query: 2    EKVWRRVGLHSSRKKRDGSGTSQEVASSVPQEAEYQNIHTLRTADLIRQRQGEEKSTLRS 61
            E V  +V     +  R  S TSQ       +E     +H+L T + +  +Q EEKS+  S
Sbjct: 4400 ESVASQVSEKDMKTSRPASSTSQFSTKEGDEETTESLLHSLTTTETVETKQMEEKSSFES 4459


>UniRef50_Q47U66 Cluster: Glycosyl transferase, group 1 family
           protein; n=1; Colwellia psychrerythraea 34H|Rep:
           Glycosyl transferase, group 1 family protein - Colwellia
           psychrerythraea (strain 34H / ATCC BAA-681)
           (Vibriopsychroerythus)
          Length = 377

 Score = 31.1 bits (67), Expect = 8.4
 Identities = 16/40 (40%), Positives = 21/40 (52%)

Query: 97  PPVEESTRTEQKRRRPPTKLKIFGIQWPLHSSDTRFVFKL 136
           P VEE+   ++K  +PPTK   F I   L      FVF+L
Sbjct: 22  PEVEEAKAIDEKVNQPPTKKSSFSILSDLTKHVPEFVFEL 61


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.316    0.130    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,438,174
Number of Sequences: 1657284
Number of extensions: 4062915
Number of successful extensions: 10248
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 10244
Number of HSP's gapped (non-prelim): 7
length of query: 137
length of database: 575,637,011
effective HSP length: 92
effective length of query: 45
effective length of database: 423,166,883
effective search space: 19042509735
effective search space used: 19042509735
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 67 (31.1 bits)