Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001526-TA|BGIBMGA001526-PA|undefined
(137 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_517| Best HMM Match : PTN_MK_C (HMM E-Value=2.4) 32 0.15
SB_40458| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.78
SB_51216| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.0
SB_15408| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_7981| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 26 9.6
SB_38389| Best HMM Match : PspA_IM30 (HMM E-Value=0.87) 26 9.6
SB_20744| Best HMM Match : CH (HMM E-Value=0.92) 26 9.6
SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07) 26 9.6
SB_2144| Best HMM Match : MACPF (HMM E-Value=0.007) 26 9.6
>SB_517| Best HMM Match : PTN_MK_C (HMM E-Value=2.4)
Length = 83
Score = 32.3 bits (70), Expect = 0.15
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 5 WRRVGLHSSRKKRDGSGTSQEVASSVPQEAEYQNIHTLRTADLIRQRQGEEKSTLRS 61
W+++ + +RK++ GSG+ Q V+ P + + R+ DL + Q S+ +S
Sbjct: 5 WKKIRVQPNRKRKCGSGSLQAVSKGRPVQLQEPTSKRKRSHDLAKVVQANVNSSKKS 61
>SB_40458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 29.9 bits (64), Expect = 0.78
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 6 RRVGLHSS---RKKRDGSGTSQEVASSVPQEAEYQNIHTLRTADLIRQRQGEEKSTLRSS 62
R++G+ ++ K+ G Q+ S P+ + + +H+L T + R GEE+ SS
Sbjct: 353 RQIGVRATGVEEKESGGDHQKQKEQGSTPECPKCKGVHSLETCE--ENRNGEERENPESS 410
Query: 63 YIIR 66
I R
Sbjct: 411 VINR 414
>SB_51216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 29.5 bits (63), Expect = 1.0
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 23 SQEVASSVPQEAEYQNIHTLRTADLIRQRQGEEKSTLRSSYIIRNGDNFILV 74
SQ V + E ++ T R + IRQR T+ + ++RN DN + V
Sbjct: 25 SQAELDDVAMDTEEPSVSTTRRPERIRQRPARLDPTVWCTALVRNIDNHLRV 76
>SB_15408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 27.5 bits (58), Expect = 4.2
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 94 HHTPPVEESTRTEQK----RRRPPTKLKIFGIQWPLHSSDTR 131
+H + ES RT R+RP +K+FG QW L + +R
Sbjct: 33 NHRAGMGESLRTVPAKTSFRKRPTPIVKVFGAQWSLMRASSR 74
>SB_7981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 2 EKVWRRVGLHSSRKKRDGSGTSQEVASSVPQEAEYQNIHTLRTADLIRQRQGEE 55
E+V G K +G +QE V +E E + ++ + + Q +GEE
Sbjct: 7 EEVNEEEGEEEEVNKEEGEEVNQEEGEEVNEEEEGKEMNEEEEGEEVNQEEGEE 60
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 26.2 bits (55), Expect = 9.6
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 14 RKKRDGSGTSQEVASSVPQEAEYQNIHTLRTADLIRQRQGEEKSTLR---SSYIIRNGDN 70
RK G+ + + +SV EAEY+ + T A + EKS + SS +++ G +
Sbjct: 24 RKTLQGTSIASKEEASVVMEAEYKGLFTSGGAKYSSKEGKTEKSENKYSASSIVVQGGSH 83
Query: 71 FI 72
I
Sbjct: 84 EI 85
>SB_38389| Best HMM Match : PspA_IM30 (HMM E-Value=0.87)
Length = 339
Score = 26.2 bits (55), Expect = 9.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 17 RDGSGTSQEVASSVPQEAEYQNIHTLRTADLIRQRQGEE 55
RD +G +EV QE E N +R +LI Q + E
Sbjct: 143 RDAAGHGEEVTKLARQEQEVINETHIRARNLIAQTKSAE 181
>SB_20744| Best HMM Match : CH (HMM E-Value=0.92)
Length = 1103
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 2 EKVWRRVGLHSSRKKRDGSGTSQEVASSVPQEAEYQNIHTLR 43
+++W+R H SR + GS + + + +EAE + LR
Sbjct: 891 KEMWKRQSRHLSRLTKTGSDVKKTKSQRLVEEAEARQEKLLR 932
>SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07)
Length = 1844
Score = 26.2 bits (55), Expect = 9.6
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 4 VWRRVGLHSSRK--KRDGSGTSQEVASSVPQEAEYQNIHTLRTADLIR 49
VW H R RD +GTSQ P+E E + TL +DL++
Sbjct: 706 VWIDKSQHVIRSDTSRDHNGTSQFSREITPEERE-PTVDTLSISDLVK 752
>SB_2144| Best HMM Match : MACPF (HMM E-Value=0.007)
Length = 434
Score = 26.2 bits (55), Expect = 9.6
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 14 RKKRDGSGTSQEVASSVPQEAEYQNIHTLRTADLIRQRQGEEKSTLR---SSYIIRNGDN 70
RK G+ + + +SV EAEY+ + T A + EKS + SS +++ G +
Sbjct: 296 RKTLQGTSIASKEEASVVMEAEYKGLFTSGGAKYSSKEGTTEKSENKYSASSIVVQGGSH 355
Query: 71 FI 72
I
Sbjct: 356 EI 357
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.130 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,133,077
Number of Sequences: 59808
Number of extensions: 136402
Number of successful extensions: 389
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 383
Number of HSP's gapped (non-prelim): 10
length of query: 137
length of database: 16,821,457
effective HSP length: 75
effective length of query: 62
effective length of database: 12,335,857
effective search space: 764823134
effective search space used: 764823134
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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