GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001526-TA|BGIBMGA001526-PA|undefined
         (137 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr...    32   0.23 
AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB ...    32   0.23 
BT011119-1|AAR82786.1| 1066|Drosophila melanogaster LD15941p pro...    29   2.9  
AE013599-815|AAF58971.2| 2408|Drosophila melanogaster CG8014-PA ...    29   2.9  

>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
            protein.
          Length = 5327

 Score = 32.3 bits (70), Expect = 0.23
 Identities = 18/60 (30%), Positives = 27/60 (45%)

Query: 2    EKVWRRVGLHSSRKKRDGSGTSQEVASSVPQEAEYQNIHTLRTADLIRQRQGEEKSTLRS 61
            E V  +V     +  R  S TSQ       +E     +H+L T + +  +Q EEKS+  S
Sbjct: 4315 ESVASQVSEKDMKTSRPASSTSQFSTKEGDEETTESLLHSLTTTETVETKQMEEKSSFES 4374


>AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB
            protein.
          Length = 5412

 Score = 32.3 bits (70), Expect = 0.23
 Identities = 18/60 (30%), Positives = 27/60 (45%)

Query: 2    EKVWRRVGLHSSRKKRDGSGTSQEVASSVPQEAEYQNIHTLRTADLIRQRQGEEKSTLRS 61
            E V  +V     +  R  S TSQ       +E     +H+L T + +  +Q EEKS+  S
Sbjct: 4400 ESVASQVSEKDMKTSRPASSTSQFSTKEGDEETTESLLHSLTTTETVETKQMEEKSSFES 4459


>BT011119-1|AAR82786.1| 1066|Drosophila melanogaster LD15941p
           protein.
          Length = 1066

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)

Query: 15  KKRDGSGTSQEVASSVPQEAEYQNIHTLRTADLIRQR---QGEEKSTL 59
           K+ D S  S + ASS P E+E Q   T      I+Q+    GE K++L
Sbjct: 307 KESDTSSGSSDTASSTPTESEQQQQLTKTRTSAIQQKYIVTGEAKNSL 354


>AE013599-815|AAF58971.2| 2408|Drosophila melanogaster CG8014-PA
            protein.
          Length = 2408

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)

Query: 15   KKRDGSGTSQEVASSVPQEAEYQNIHTLRTADLIRQR---QGEEKSTL 59
            K+ D S  S + ASS P E+E Q   T      I+Q+    GE K++L
Sbjct: 1649 KESDTSSGSSDTASSTPTESEQQQQLTKTRTSAIQQKYIVTGEAKNSL 1696


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.130    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,183,968
Number of Sequences: 52641
Number of extensions: 201905
Number of successful extensions: 573
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 571
Number of HSP's gapped (non-prelim): 4
length of query: 137
length of database: 24,830,863
effective HSP length: 78
effective length of query: 59
effective length of database: 20,724,865
effective search space: 1222767035
effective search space used: 1222767035
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)