GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001526-TA|BGIBMGA001526-PA|undefined
         (137 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    25   0.38 
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    24   0.51 

>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 24.6 bits (51), Expect = 0.38
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 7   RVGLHSSRKKRDGSGTSQEVASSVPQEAEYQNI 39
           R+G H  R KRD +G     +S+V     YQ++
Sbjct: 256 RMGFHGMRGKRDAAGIYGSNSSTVGTIFGYQDM 288


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 0.51
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 7   RVGLHSSRKKRDGSGTSQEVASSVPQEAEYQNIH 40
           R+G H  R KRD +G     +S+V     YQ  +
Sbjct: 256 RMGFHGMRGKRDAAGIYGSNSSTVGTIFGYQGTY 289


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.130    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,963
Number of Sequences: 429
Number of extensions: 1159
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 137
length of database: 140,377
effective HSP length: 52
effective length of query: 85
effective length of database: 118,069
effective search space: 10035865
effective search space used: 10035865
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
S2: 40 (20.2 bits)