Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001524-TA|BGIBMGA001524-PA|undefined
(130 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q29AL4 Cluster: GA11831-PA; n=1; Drosophila pseudoobscu... 34 0.76
UniRef50_A0TVY1 Cluster: Putative uncharacterized protein precur... 34 1.0
UniRef50_UPI00004989D0 Cluster: conserved hypothetical protein; ... 33 2.3
UniRef50_Q22F29 Cluster: Ubiquitin-transferase, HECT-domain; n=1... 33 2.3
UniRef50_A2D8J4 Cluster: Putative uncharacterized protein; n=1; ... 33 2.3
UniRef50_A6LU24 Cluster: Type II secretion system protein; n=1; ... 32 3.1
UniRef50_Q4YNW7 Cluster: Putative uncharacterized protein; n=2; ... 32 3.1
UniRef50_UPI000049876F Cluster: tRNA splicing endonuclease; n=1;... 32 4.1
UniRef50_Q47592 Cluster: Putative uncharacterized protein ORF708... 32 4.1
UniRef50_Q23AY1 Cluster: Cyclic nucleotide-binding domain contai... 32 4.1
UniRef50_A2EDE6 Cluster: Putative uncharacterized protein; n=1; ... 32 4.1
UniRef50_Q6C7H0 Cluster: Similar to sp|P39985 Saccharomyces cere... 32 4.1
UniRef50_P40345 Cluster: Phospholipid:diacylglycerol acyltransfe... 32 4.1
UniRef50_O42202 Cluster: Neurogenic differentiation factor 1; n=... 32 4.1
UniRef50_Q4CSI9 Cluster: Putative uncharacterized protein; n=2; ... 31 5.4
UniRef50_Q1HQV9 Cluster: Reverse transcriptase-like protein; n=1... 31 5.4
UniRef50_Q54UC0 Cluster: DNA-dependent protein kinase (DNAPK) su... 31 7.1
UniRef50_Q64RV3 Cluster: Putative cell surface protein; n=3; Bac... 31 9.4
UniRef50_Q4MW71 Cluster: CBS domain protein; n=8; Bacillus|Rep: ... 31 9.4
UniRef50_Q95QA3 Cluster: Putative uncharacterized protein; n=3; ... 31 9.4
UniRef50_Q8I273 Cluster: Putative uncharacterized protein PFA034... 31 9.4
UniRef50_Q4YPW4 Cluster: Putative uncharacterized protein; n=5; ... 31 9.4
UniRef50_Q23EX9 Cluster: Putative uncharacterized protein; n=1; ... 31 9.4
UniRef50_A2EEN3 Cluster: Clan CA, family C19, ubiquitin hydrolas... 31 9.4
UniRef50_Q55YW4 Cluster: Putative uncharacterized protein; n=1; ... 31 9.4
UniRef50_A7TMU7 Cluster: Putative uncharacterized protein; n=1; ... 31 9.4
UniRef50_Q04712 Cluster: RNA polymerase I-specific transcription... 31 9.4
UniRef50_O82782 Cluster: 1-(5-phosphoribosyl)-5-[(5-phosphoribos... 31 9.4
>UniRef50_Q29AL4 Cluster: GA11831-PA; n=1; Drosophila
pseudoobscura|Rep: GA11831-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1264
Score = 34.3 bits (75), Expect = 0.76
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 7 PVTYATGETVFDDLSRSEEIGHEKLIGSKDSEDQNEEK 44
P T AT ++V++ L E++G E+ KD++ +NE+K
Sbjct: 771 PQTAATNKSVYEVLDSDEDVGEEQDDNDKDNDAENEDK 808
>UniRef50_A0TVY1 Cluster: Putative uncharacterized protein
precursor; n=1; Burkholderia cenocepacia MC0-3|Rep:
Putative uncharacterized protein precursor -
Burkholderia cenocepacia MC0-3
Length = 565
Score = 33.9 bits (74), Expect = 1.0
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Query: 5 VLPVTYATGET-VFDDLSRSEEIGHEKLIGSKDSEDQNEEKKGFDLQNKRINEGTKKYIN 63
+L VT + G+T ++D+L E +L+ S S N +D + G Y N
Sbjct: 398 LLNVTQSLGKTFLWDNLFLQAEFAFNRLL-SVQSHPGNVANSSYDTTGQCSASGNNPYNN 456
Query: 64 CLDFISIVCTINFFTGVLIPSSVKYFIKLPQGLRNSPLLVPLNDKAFSPLGG 115
C + F+ G I ++ +++ P PL V LN K +SP+ G
Sbjct: 457 C--------STRFWAGFGIGATPQWYQVFPGVDLTMPLFVNLNLKGYSPVIG 500
>UniRef50_UPI00004989D0 Cluster: conserved hypothetical protein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 468
Score = 32.7 bits (71), Expect = 2.3
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 16 VFDDLSRSEEIGHEKLIGSKDSEDQNEEKKGFDLQNKRINEGTKKYINCLDFISIVCTIN 75
+ D+ +E E IG +D E+Q EEKK D++ K+ K+Y + +++C N
Sbjct: 13 IIQDIEEKKE--QETKIG-EDKEEQEEEKKVKDIEEKKEEFDRKEYYKKKNSETVICPFN 69
>UniRef50_Q22F29 Cluster: Ubiquitin-transferase, HECT-domain; n=1;
Tetrahymena thermophila SB210|Rep:
Ubiquitin-transferase, HECT-domain - Tetrahymena
thermophila SB210
Length = 3694
Score = 32.7 bits (71), Expect = 2.3
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 35 KDSEDQNEEKKGFDLQNKRINEGTKKYINCLDFISIVCTINFFTGVLIPSSVKYFIKLPQ 94
+D+ + E + D + K +NE ++ + F + FTG+ V KL
Sbjct: 383 EDTNIEFENRFVDDFKAKYLNEDQTDFVENVKFDDVARYFEQFTGIYKSIKVDLLNKL-- 440
Query: 95 GLRNSPLLVPLNDKAFSPLGGFVRYY 120
G +NSP L L + L ++YY
Sbjct: 441 GTKNSPHLAKLEQECNDLLDTLIKYY 466
>UniRef50_A2D8J4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 2079
Score = 32.7 bits (71), Expect = 2.3
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 29 EKLIGSKDSEDQNEEKKGFDLQNKRINE 56
EK I SKD +D NEEK +NK NE
Sbjct: 1475 EKQISSKDKQDSNEEKPSSKEENKNSNE 1502
>UniRef50_A6LU24 Cluster: Type II secretion system protein; n=1;
Clostridium beijerinckii NCIMB 8052|Rep: Type II
secretion system protein - Clostridium beijerinckii
NCIMB 8052
Length = 371
Score = 32.3 bits (70), Expect = 3.1
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 12 TGETVFDDLSRSEEIGHEKLIGSKDSEDQNEEKKGF-DLQNK---RINEGTKKYINCLDF 67
+GET+ + L +S L + E+ ++GF +L N R+NE +KY+ ++
Sbjct: 281 SGETLTESLEKSGVFSKYALAIVRIREEGGTIEEGFKELANTLEYRLNEKIQKYLKMINP 340
Query: 68 ISIVCTINFFTGVLIPSSVKYFIKLPQGLR 97
I I+ +F T L+ + F L G+R
Sbjct: 341 IFIIMMASFITLFLLIFVLPLFNNLKGGIR 370
>UniRef50_Q4YNW7 Cluster: Putative uncharacterized protein; n=2;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 267
Score = 32.3 bits (70), Expect = 3.1
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 11 ATGETVFDDLSRSEEIGHEKLIGSKDSE-DQNEEKKGFDLQNKRINEGTKKYINCLDFIS 69
+T T F+D ++SE H L +K+ E ++N + KG QN + + + + C D +
Sbjct: 122 STHATSFEDSNKSES-SHTYLDTTKEKENEENNDSKGNVAQNFQKSNISSNQVECTDDVK 180
Query: 70 IVCTINF 76
+ T N+
Sbjct: 181 LTETDNY 187
>UniRef50_UPI000049876F Cluster: tRNA splicing endonuclease; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: tRNA splicing
endonuclease - Entamoeba histolytica HM-1:IMSS
Length = 1140
Score = 31.9 bits (69), Expect = 4.1
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 19 DLSRSEEIGHEKLIGSKDSEDQNEEKKGFDLQNKRIN 55
DLS+ EE +KD+ +Q EEKK FDL+ R N
Sbjct: 1014 DLSQVEEDNDNT--STKDNNEQQEEKKPFDLEKARSN 1048
>UniRef50_Q47592 Cluster: Putative uncharacterized protein ORF708;
n=2; Escherichia coli|Rep: Putative uncharacterized
protein ORF708 - Escherichia coli
Length = 708
Score = 31.9 bits (69), Expect = 4.1
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 13 GETVFDDLSRSEEIGHEKLIGSKDSEDQNEEKKGF---DLQNKRINEGTKKYINCLDFIS 69
G + D L+ EEI EK++GS EK+GF D++ + +++ +DF S
Sbjct: 313 GRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGS 372
Query: 70 IVCT 73
IV T
Sbjct: 373 IVTT 376
>UniRef50_Q23AY1 Cluster: Cyclic nucleotide-binding domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Cyclic nucleotide-binding domain containing
protein - Tetrahymena thermophila SB210
Length = 2154
Score = 31.9 bits (69), Expect = 4.1
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 9 TYATGETVFDDLSRSEEIGHEKLIGSKDSEDQNEEKKGFDLQNKRINEGTKKYIN 63
T+ GE D L+R+ ++ K +E +NE ++ ++N R ++ ++Y+N
Sbjct: 463 THLQGEQQLDSLNRNLKVKENKQSKVLHTEPENESRRQNKIKNIRYSQNKQQYVN 517
>UniRef50_A2EDE6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 2166
Score = 31.9 bits (69), Expect = 4.1
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 14 ETVFDDLSRSEEI-GHEKLIGSKDSEDQNEEKKGFDLQNKRINEGT 58
+ VFD EEI G +K++ S SE++N+E+K + K ++ +
Sbjct: 1113 KNVFDSSENDEEIKGKKKILDSSSSENENDEEKRNQKKKKLVDSSS 1158
>UniRef50_Q6C7H0 Cluster: Similar to sp|P39985 Saccharomyces
cerevisiae YEL055c POL5 DNA polymerase V; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P39985 Saccharomyces
cerevisiae YEL055c POL5 DNA polymerase V - Yarrowia
lipolytica (Candida lipolytica)
Length = 1045
Score = 31.9 bits (69), Expect = 4.1
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 1 MWKSVLPVTYATGETVFDDLSRSEEI-GHEKLIGSKDSEDQNEE 43
+W+ ++ + VFD L E + G EKL G + ED++EE
Sbjct: 678 VWEGLVLENKVNMQLVFDVLKTEENVKGQEKLFGEEGEEDEDEE 721
>UniRef50_P40345 Cluster: Phospholipid:diacylglycerol
acyltransferase; n=4; Saccharomycetales|Rep:
Phospholipid:diacylglycerol acyltransferase -
Saccharomyces cerevisiae (Baker's yeast)
Length = 661
Score = 31.9 bits (69), Expect = 4.1
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 20 LSRSEEIGHEKLIGSKDSEDQNEEKKGFDLQNKRINEGTKKYINCLDFISIVCTINFFTG 79
+ + +GH++ G S +NE K FD KR G K++ D ++ + F G
Sbjct: 35 IHHQQGLGHKRRRGISGSAKRNERGKDFD--RKRDGNGRKRW---RDSRRLIFILGAFLG 89
Query: 80 VLIPSS 85
VL+P S
Sbjct: 90 VLLPFS 95
>UniRef50_O42202 Cluster: Neurogenic differentiation factor 1;
n=12; Coelomata|Rep: Neurogenic differentiation factor
1 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 350
Score = 31.9 bits (69), Expect = 4.1
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 12 TGETVFDDLSRSEEIGHEKLIGSKDSEDQNEEKKGFDLQNKRINEGTKK 60
T E + +D+ ++ G +L D E++ EE+ G D + KR KK
Sbjct: 37 TSEPMLNDMEDDDDAGLNRLEDEDDEEEEEEEEDGDDTKPKRRGPKKKK 85
>UniRef50_Q4CSI9 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 325
Score = 31.5 bits (68), Expect = 5.4
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 14 ETVFDDLSRSEEIGHEKLIGSKDSEDQNEEKKGFDLQNKRINEGTKK 60
E V + LSRS E G E+ +E++ EEK+G + + + EGT++
Sbjct: 80 EAVAESLSRSLETGEEE--EEISAEEEEEEKEGTEEEEEEEKEGTEE 124
>UniRef50_Q1HQV9 Cluster: Reverse transcriptase-like protein; n=1;
Aedes aegypti|Rep: Reverse transcriptase-like protein -
Aedes aegypti (Yellowfever mosquito)
Length = 268
Score = 31.5 bits (68), Expect = 5.4
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 44 KKGFDLQNKRINEGTKKYINCLDFISIVCTINFFTGVLIPSSVKYFIKLPQGLRNSPLLV 103
++ F +N+R E T Y+N L +SI C FT + + KLP ++P V
Sbjct: 84 RREFYRRNQRPGEYTGVYVNELKRLSIKCNFGAFTHDALRDRIACG-KLPDDKTSNPTTV 142
Query: 104 PLNDKAFS 111
P K S
Sbjct: 143 PTTSKGQS 150
>UniRef50_Q54UC0 Cluster: DNA-dependent protein kinase (DNAPK)
subunit; n=1; Dictyostelium discoideum AX4|Rep:
DNA-dependent protein kinase (DNAPK) subunit -
Dictyostelium discoideum AX4
Length = 4299
Score = 31.1 bits (67), Expect = 7.1
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 16 VFDDLSRSEEIGHEKLIGSKDSEDQNEEKKGFDLQNKRINEGTKKYINCL----DFISIV 71
+F++ E++ ++ I D D N + K N + NC +I V
Sbjct: 732 IFNNQIIDEQLQQQQDIMDIDDTDNNSNSNN-KINKKLTNSLEEDKNNCFILFKKYIKEV 790
Query: 72 CT-INFFTGVLIPSSVKYFIKLPQGLRNSPLLVPLNDKAF 110
I+ + L+ S ++ + LP+ L + PLLVP+ + AF
Sbjct: 791 SNFISHYKDELLSSCIELLLSLPKQLISIPLLVPIANLAF 830
>UniRef50_Q64RV3 Cluster: Putative cell surface protein; n=3;
Bacteroides|Rep: Putative cell surface protein -
Bacteroides fragilis
Length = 593
Score = 30.7 bits (66), Expect = 9.4
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 24 EEIGHEKLIGSKDSEDQNEEKKGFDLQNKRINEGTKKYINCLDFISIVCTINFFTGVLIP 83
+ G++++ G + D + ++ GF + N +GT+ + +DFI I C + +G L
Sbjct: 522 DNFGNDQIEGGS-TVDGSGQRNGFKISNAIHADGTEANLQYIDFIKIQCGVLAKSGWLGE 580
Query: 84 SSVKYF 89
S + F
Sbjct: 581 VSTEVF 586
>UniRef50_Q4MW71 Cluster: CBS domain protein; n=8; Bacillus|Rep: CBS
domain protein - Bacillus cereus G9241
Length = 184
Score = 30.7 bits (66), Expect = 9.4
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 83 PSSVKYFIKLPQGLRNSPLLVPLNDKAFSPLGGFV 117
P SV+YF K+ +G SPL V + D LGGF+
Sbjct: 14 PISVRYFAKM-KGKGRSPLQVNIKDSLTGLLGGFL 47
>UniRef50_Q95QA3 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 803
Score = 30.7 bits (66), Expect = 9.4
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 51 NKRINEGTKKYINCLDFISIVCTINFFTGVLIPSSVKYFIKLPQGL 96
+K ++ K Y+ CL S+ +N V IPS+ F K+ +G+
Sbjct: 477 DKLFSQVVKAYVECLAHKSLANLVNHLRFVAIPSTSSLFYKMIEGI 522
>UniRef50_Q8I273 Cluster: Putative uncharacterized protein PFA0340w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFA0340w - Plasmodium falciparum
(isolate 3D7)
Length = 734
Score = 30.7 bits (66), Expect = 9.4
Identities = 15/87 (17%), Positives = 42/87 (48%)
Query: 8 VTYATGETVFDDLSRSEEIGHEKLIGSKDSEDQNEEKKGFDLQNKRINEGTKKYINCLDF 67
++Y + + +++ ++ + + + + E+KK + N I++G + +++ +DF
Sbjct: 468 ISYEFEDVNINKCNKNYNSNNDSMQNNNIKDKKEEKKKKIHITNILIHDGARPFLSEIDF 527
Query: 68 ISIVCTINFFTGVLIPSSVKYFIKLPQ 94
+++ V++ S IKL Q
Sbjct: 528 FNLIYYSTLDKNVILGSKATDTIKLIQ 554
>UniRef50_Q4YPW4 Cluster: Putative uncharacterized protein; n=5;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 2030
Score = 30.7 bits (66), Expect = 9.4
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 21 SRSEEIGHEKLIGSKDSEDQ---NEEKKGFDLQNKRINEGTKKYINCLDFISIVCTINFF 77
+ SEE E++ + +D+ N++K+ ++ ++N+ KKY+ ++I+++ T N
Sbjct: 1655 TESEESSEEEVETESEGDDETERNKQKENKIGKDSKVNKCKKKYVKACEYINMINTNNIC 1714
Query: 78 TGV--LIPSSVKYFIK 91
L + +KY K
Sbjct: 1715 DKYFNLANNRIKYIYK 1730
>UniRef50_Q23EX9 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 310
Score = 30.7 bits (66), Expect = 9.4
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 9 TYATGETVFDDLSRSEEIGHEKLIGSKDSEDQNE-EKKGFDLQNKRINEGTKK--YINCL 65
TY +G+T D+ ++++E EK K+ + +N+ EK+G + N+ +K N
Sbjct: 228 TYQSGKTDDDEQNKTKENQDEKKQEIKEEKQENQIEKEGDKTNSNSENDQNEKNNLTNNT 287
Query: 66 DFISIVCTINFFTGVLIPS 84
D+ S C + +L+ S
Sbjct: 288 DYKSSSCKLQMILLLLVSS 306
>UniRef50_A2EEN3 Cluster: Clan CA, family C19, ubiquitin
hydrolase-like cysteine peptidase; n=1; Trichomonas
vaginalis G3|Rep: Clan CA, family C19, ubiquitin
hydrolase-like cysteine peptidase - Trichomonas
vaginalis G3
Length = 1146
Score = 30.7 bits (66), Expect = 9.4
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Query: 36 DSEDQNEEKKGFDLQNKRINEGTKKYINCLDFISIVCT 73
+ +DQNEEKK N ++ +K+++ LDF+S++ T
Sbjct: 664 NEKDQNEEKKS----NVASSKNDEKFVSSLDFVSLLLT 697
>UniRef50_Q55YW4 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 165
Score = 30.7 bits (66), Expect = 9.4
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 12 TGETVFDDLSRSEEIGHEKLIGSKDSEDQNEEKKGFDLQNKRINEGTKK 60
TGE D + ++ E E++I +D E +NEE F++Q KR+N K+
Sbjct: 56 TGEEGEDTVEKAVEGLAEQII-KEDEEKRNEELDLFNIQPKRVNWDLKR 103
>UniRef50_A7TMU7 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1016
Score = 30.7 bits (66), Expect = 9.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 47 FDLQNKRINEGTKKYINCLDFISIVCTIN 75
F KR+NE T++YI CLD + + I+
Sbjct: 390 FLFNKKRLNEATEQYIQCLDVVEMSSIIS 418
>UniRef50_Q04712 Cluster: RNA polymerase I-specific transcription
initiation factor RRN11; n=2; Saccharomyces
cerevisiae|Rep: RNA polymerase I-specific transcription
initiation factor RRN11 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 507
Score = 30.7 bits (66), Expect = 9.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 2 WKSVLPVTYATGETVFDDLSRSEEIGHEKLIGSKDSEDQNEEKK 45
W+SV+ Y+T E+ D E G E G D ED +EE+K
Sbjct: 84 WRSVVGEIYSTTESETDSQEEETEEGGEHDTGI-DKEDSDEERK 126
>UniRef50_O82782 Cluster:
1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase, chloroplast
precursor; n=20; cellular organisms|Rep:
1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase, chloroplast precursor
- Arabidopsis thaliana (Mouse-ear cress)
Length = 304
Score = 30.7 bits (66), Expect = 9.4
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 4 SVLPVTYATGETVFDDLSRSEEIG 27
S +PVTYA G TV DD+ R ++ G
Sbjct: 246 SPIPVTYAGGVTVMDDVERIKDAG 269
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.139 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,891,175
Number of Sequences: 1657284
Number of extensions: 6992923
Number of successful extensions: 20263
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 20239
Number of HSP's gapped (non-prelim): 44
length of query: 130
length of database: 575,637,011
effective HSP length: 92
effective length of query: 38
effective length of database: 423,166,883
effective search space: 16080341554
effective search space used: 16080341554
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 66 (30.7 bits)
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