Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001524-TA|BGIBMGA001524-PA|undefined
(130 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51318| Best HMM Match : DNA_pol_B_2 (HMM E-Value=3.2) 29 1.2
SB_35782| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_11499| Best HMM Match : C1_1 (HMM E-Value=1.5) 29 1.2
SB_51719| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_32475| Best HMM Match : IWS1_C (HMM E-Value=0) 28 2.8
SB_13004| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34) 28 2.8
SB_48008| Best HMM Match : M (HMM E-Value=0.0068) 27 3.7
SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9
SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4) 27 4.9
SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019) 27 4.9
SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9
SB_26227| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 27 4.9
SB_8940| Best HMM Match : Toxin_23 (HMM E-Value=7.4) 27 4.9
SB_58820| Best HMM Match : DUF1014 (HMM E-Value=6.4) 27 6.4
SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30) 27 6.4
SB_58879| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_54201| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_48236| Best HMM Match : DNA_pol_B_2 (HMM E-Value=8.6e-09) 26 8.5
SB_47001| Best HMM Match : Asparaginase_2 (HMM E-Value=2.5e-40) 26 8.5
>SB_51318| Best HMM Match : DNA_pol_B_2 (HMM E-Value=3.2)
Length = 847
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 22 RSEEIGHEKLIGSKDSEDQNEEKKGFDLQNKRINEGTKKYINCLDF 67
+ E G ++ + S D E++ E+ +DL+ TK +C D+
Sbjct: 25 QQEGRGKKRSLDSDDDEEEEEDDVTYDLRQVTTRHSTKMRTDCTDY 70
>SB_35782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 22 RSEEIGHEKLIGSKDSEDQNEEKKGFDLQNKRINEGTKKYINCLDF 67
+ E G ++ + S D E++ E+ +DL+ TK +C D+
Sbjct: 187 QQEGRGKKRSLDSDDDEEEEEDDVTYDLRQVTTRHSTKMRTDCTDY 232
>SB_11499| Best HMM Match : C1_1 (HMM E-Value=1.5)
Length = 572
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 34 SKDSEDQNEEKKG--FDLQNKRINEGTKKYINCLDF 67
S DS+D+ EEK +DL+ TK I+C D+
Sbjct: 92 SHDSDDEEEEKDDVTYDLRQVTTRHSTKMRIDCTDY 127
>SB_51719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1296
Score = 28.7 bits (61), Expect = 1.6
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 22 RSEEIGHEKLIGSKDSEDQNEEKK-GFDLQNKRINEGTKKYINCLDF 67
+ E G ++ GS+D E++ EE+ +DL+ TK +C D+
Sbjct: 86 QQEGRGKKRSHGSEDEEEEEEEEDVTYDLRQVTTRHSTKMRTHCTDY 132
>SB_32475| Best HMM Match : IWS1_C (HMM E-Value=0)
Length = 768
Score = 27.9 bits (59), Expect = 2.8
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 18 DDLSRSEEIGHEKLIGSKDSEDQNEEKKGFDLQNKRINEGTK 59
D+ S EE+G + + + D+ EE +GFD ++ + + K
Sbjct: 300 DEGSEQEEVGDQLIADIFGASDEEEEFEGFDQEDIEVTKKKK 341
>SB_13004| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34)
Length = 636
Score = 27.9 bits (59), Expect = 2.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 38 EDQNEEKKGFDLQNKRINEGTKKYINCL 65
EDQN++K F N+ N T++YI +
Sbjct: 355 EDQNKDKHSFRSFNRSFNPPTRRYIGAV 382
>SB_48008| Best HMM Match : M (HMM E-Value=0.0068)
Length = 1068
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 20 LSRSEEIGHEKLIGSKDSEDQNEEKKGFDLQNKRINEGTKKYINCL 65
L R +E+ K+ + + D++ K + NK+ NE T KY + L
Sbjct: 505 LQRHKEMSTYKMHALQQALDESVPSKDLEAANKQYNELTSKYRDLL 550
>SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1120
Score = 27.1 bits (57), Expect = 4.9
Identities = 10/24 (41%), Positives = 18/24 (75%)
Query: 23 SEEIGHEKLIGSKDSEDQNEEKKG 46
SEE+ +K+ G+K + D+N E++G
Sbjct: 284 SEELTKQKMSGNKHNRDKNTEEEG 307
>SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4)
Length = 311
Score = 27.1 bits (57), Expect = 4.9
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 22 RSEEIGHEKLIGSKDSEDQNEEKKGFDLQNKRINE 56
+ E + EK +K+ E N+E+K + + KR+N+
Sbjct: 235 KKERLNKEKEQLNKEKEQLNKERKRLNKERKRVNK 269
>SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019)
Length = 94
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 34 SKDSEDQNEEKKGFDLQNKRINEGTKKYINCLDFISIVCTIN 75
+ DS D ++EK+ D NK++ + KK + I++ C +N
Sbjct: 8 NSDSSDSDDEKEEEDETNKKVEDNAKK----MAAIALPCYLN 45
>SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 638
Score = 27.1 bits (57), Expect = 4.9
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 22 RSEEIGHEKLIGSKDSEDQNEEKKGFDLQNKRINE 56
+ E + EK +K+ E N+E+K + + KR+N+
Sbjct: 494 KKERLNKEKEQLNKEKEQLNKERKRLNKERKRVNK 528
>SB_26227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 37 SEDQNEEKKGFDLQNKRINEGTKKYINCLDFISIVCTINFFTGVLIPSSVKYFIK 91
S ++ ++ + KR N+G ++ N I+I+ I F PSS YF++
Sbjct: 200 SRERASVRETLQMTEKRTNDGRERKAN----ITIMIVIGLFVVCWFPSSFYYFLQ 250
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 34 SKDSEDQNEEKKGFDLQNKRINEGTKKYINCLDFISIVCTIN 75
+ DS D ++EK+ D NK++ + KK + I++ C +N
Sbjct: 335 NSDSSDSDDEKEEEDETNKKVEDNAKK----MAAIALPCYLN 372
>SB_8940| Best HMM Match : Toxin_23 (HMM E-Value=7.4)
Length = 356
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 22 RSEEIGHEKLIGSKDSEDQNEEKKG--FDLQNKRINEGTKKYINCLDF 67
+ E G ++ + S D E++ EK+ +DL+ TK +C D+
Sbjct: 35 QQEGRGRKRPLDSDDEEEEEREKEDVTYDLRQVTTRHSTKMRTDCTDY 82
>SB_58820| Best HMM Match : DUF1014 (HMM E-Value=6.4)
Length = 238
Score = 26.6 bits (56), Expect = 6.4
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 23 SEEIGHEKLIGSKDSEDQNEEKKGFDLQNKRINEGTKKYINCLD 66
+E + K+ S + + + K G D++ RI EG + C++
Sbjct: 167 TESLAVSKVTASDTTNSERDGKNGEDVEKGRIREGNGIKLPCIE 210
>SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 26.6 bits (56), Expect = 6.4
Identities = 14/66 (21%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 22 RSEEIGHEKLIGSKDSEDQNEEKKG--FDLQNKRINEGTKKYINCLDFISIVCTINFFTG 79
+ E G ++ + + D +++ +EK+ +DL+ TK +C D+ I+
Sbjct: 112 QQEGRGKKRSLDNDDEKEEEKEKEDVTYDLRQVTTRHSTKMRTDCTDYKLILLLYRLCAD 171
Query: 80 VLIPSS 85
+ +P S
Sbjct: 172 INLPLS 177
>SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30)
Length = 3015
Score = 26.6 bits (56), Expect = 6.4
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 19 DLSRSEEIGHEKLIGSKDSEDQNEEKKGFDLQNKRINE 56
D ++++++GHE+LI + E + E G K N+
Sbjct: 1915 DFAKTDQVGHEQLIIGNNQEFASYEPSGVTSVKKTSND 1952
>SB_58879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1786
Score = 26.2 bits (55), Expect = 8.5
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 80 VLIPSSVKYFIKLPQGL----RNSPLLVPLNDKAFSPLG-GFVRYYKEV 123
VL P +K +L +G RNSPLLV +N K+ G F+R +K++
Sbjct: 832 VLPPMFIKGLSELAKGEVVKPRNSPLLVFVNSKSGDNQGVKFIRKFKQL 880
>SB_54201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 26.2 bits (55), Expect = 8.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 27 GHEKLIGSKDSEDQNEEKKGFDLQNKRINEGTK 59
G K + ++E +NE K FD +NK N+ T+
Sbjct: 41 GVTKSVRLSEAEKENESNKFFDKENKPENKRTE 73
>SB_48236| Best HMM Match : DNA_pol_B_2 (HMM E-Value=8.6e-09)
Length = 1396
Score = 26.2 bits (55), Expect = 8.5
Identities = 10/46 (21%), Positives = 23/46 (50%)
Query: 22 RSEEIGHEKLIGSKDSEDQNEEKKGFDLQNKRINEGTKKYINCLDF 67
R ++ H+ ++ E++ E++ +DL+ TK +C D+
Sbjct: 94 RGKKRSHDSDDEDEEEEEEEEDEVTYDLRQVTTRHSTKMRTDCTDY 139
>SB_47001| Best HMM Match : Asparaginase_2 (HMM E-Value=2.5e-40)
Length = 423
Score = 26.2 bits (55), Expect = 8.5
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 24 EEIGHEKLIGSKDSEDQNEEKKGFDLQN 51
E+ +EKL K+ ED+ E+KK FD N
Sbjct: 216 EKENNEKL--QKEKEDKEEDKKDFDCVN 241
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.139 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,837,204
Number of Sequences: 59808
Number of extensions: 200702
Number of successful extensions: 560
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 523
Number of HSP's gapped (non-prelim): 43
length of query: 130
length of database: 16,821,457
effective HSP length: 75
effective length of query: 55
effective length of database: 12,335,857
effective search space: 678472135
effective search space used: 678472135
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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