Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001523-TA|BGIBMGA001523-PA|undefined
(69 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0511 + 25056018-25059107 67 2e-12
02_04_0148 - 20198407-20201424 64 1e-11
01_06_0662 + 30987187-30987277,30987825-30990214 28 1.1
01_06_0644 + 30821811-30821855,30822707-30822976,30823079-308243... 27 1.9
01_05_0195 - 19111983-19112477,19112646-19113950,19114053-191143... 27 1.9
10_07_0098 - 12844631-12845074,12845329-12846570 27 2.5
05_01_0179 - 1240271-1241600,1241713-1241765 26 3.3
11_06_0213 - 21321676-21322069,21322311-21322507,21322818-213234... 26 4.3
11_04_0160 + 14247463-14247584,14247710-14247923,14250099-142502... 26 4.3
02_04_0440 + 22954950-22955213,22955317-22956621,22956791-22957522 26 4.3
02_04_0056 + 19313422-19313967,19314035-19314168,19314263-193143... 25 5.7
02_05_0850 + 32209798-32210086,32210779-32212316 25 9.9
02_05_0435 - 28958422-28958665,28959328-28959462,28960056-289602... 25 9.9
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 66.9 bits (156), Expect = 2e-12
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 1 MLFSHWEVIDIDPFWRPCTEEEYLHWGEKYD-GVNRAKAYMDSVRARKGLATDKQLVQHA 59
++ SHWE I DPF+ P T EE +G+ G N AK M+SVR RKGL ++++V+H
Sbjct: 960 LVLSHWEAIPEDPFFIPKTHEEIEEFGDGSSIGPNLAKKLMNSVRRRKGLHVEEKVVEHG 1019
Query: 60 EKQRTLSK 67
KQRTL+K
Sbjct: 1020 TKQRTLAK 1027
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 64.1 bits (149), Expect = 1e-11
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 1 MLFSHWEVIDIDPFWRPCTEEEYLHWGEKYD-GVNRAKAYMDSVRARKGLATDKQLVQHA 59
+ FSHWE + DPF+ P T EE +G+ + G N A M+SVR RKGL ++++V++
Sbjct: 936 LAFSHWETVPQDPFFVPKTREEIEEFGDGSNIGPNLATKLMNSVRRRKGLHVEEKIVEYG 995
Query: 60 EKQRTLSK 67
KQRTL+K
Sbjct: 996 TKQRTLAK 1003
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 27.9 bits (59), Expect = 1.1
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 2 LFSHWEVIDIDPFWRPCTEEEYLHW 26
+F HWE++ +DP P T + L W
Sbjct: 796 VFDHWEMLSVDPL-EPGTRQLTLSW 819
>01_06_0644 +
30821811-30821855,30822707-30822976,30823079-30824383,
30824551-30824692,30824752-30825275
Length = 761
Score = 27.1 bits (57), Expect = 1.9
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 17 PCTEEEYLHWGEKYDGVNR---AKAYMDSVRARKGLATDKQL-VQHAEKQRTLSK 67
P + EEYLHW Y GV R + D V A L D + +Q+ K + K
Sbjct: 488 PSSYEEYLHW---YSGVTRRYLVPSISDDVEAGPSLQPDDSIDLQYQAKAPMIRK 539
>01_05_0195 - 19111983-19112477,19112646-19113950,19114053-19114322,
19118884-19118950,19119229-19119284,19119530-19119590,
19120181-19120297,19120570-19120682,19120774-19120848,
19121464-19122045,19122056-19122271,19122372-19122497,
19126152-19126190,19126266-19126360,19126423-19126962,
19127102-19127327,19127385-19127437,19127534-19127701,
19128353-19128707,19128785-19128876,19129891-19129993
Length = 1717
Score = 27.1 bits (57), Expect = 1.9
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 17 PCTEEEYLHWGEKYDGVNR---AKAYMDSVRARKGLATDKQL-VQHAEKQRTLSK 67
P + EEYLHW Y GV R + D V A L D + +Q+ K + K
Sbjct: 1501 PSSYEEYLHW---YSGVTRRYLVPSISDDVEAGPSLQPDDSIDLQYQAKAPMIRK 1552
>10_07_0098 - 12844631-12845074,12845329-12846570
Length = 561
Score = 26.6 bits (56), Expect = 2.5
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 14 FWRPCTEEEYLHWGEKYDGVNRAKAYMDSVRARKGLATDKQLVQHAE 60
FWR Y H +KY V + +++KG T+K+ VQ AE
Sbjct: 506 FWRMFDASHYEHCRQKYGAVGTFMSVY--YKSKKGRKTEKE-VQEAE 549
>05_01_0179 - 1240271-1241600,1241713-1241765
Length = 460
Score = 26.2 bits (55), Expect = 3.3
Identities = 11/14 (78%), Positives = 11/14 (78%)
Query: 11 IDPFWRPCTEEEYL 24
I PF RPCT EEYL
Sbjct: 435 IVPFARPCTLEEYL 448
>11_06_0213 -
21321676-21322069,21322311-21322507,21322818-21323477,
21323522-21323578,21324741-21324848
Length = 471
Score = 25.8 bits (54), Expect = 4.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 26 WGEKYDGVNRAKAYMD 41
WGEKYDG + Y D
Sbjct: 342 WGEKYDGCGGSAKYTD 357
>11_04_0160 +
14247463-14247584,14247710-14247923,14250099-14250215,
14251578-14251670,14251748-14251922,14252981-14253017,
14253842-14253875,14254212-14254481,14255768-14255872,
14256295-14256392,14256474-14256616,14257197-14257290,
14257378-14257487,14258018-14258172,14258252-14258332,
14258415-14258535,14259358-14259464,14259537-14259668,
14261105-14261258,14264094-14264211,14264344-14264517,
14264831-14264882,14265450-14265577,14265670-14265820,
14265904-14266242
Length = 1107
Score = 25.8 bits (54), Expect = 4.3
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 15 WRPCTEEEYLHWGEKYDGVNRA 36
WR EEYL W + N A
Sbjct: 563 WRELESEEYLEWSRSFKEANSA 584
>02_04_0440 + 22954950-22955213,22955317-22956621,22956791-22957522
Length = 766
Score = 25.8 bits (54), Expect = 4.3
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 6/45 (13%)
Query: 17 PCTEEEYLHWGEKYDGVNR---AKAYMDSVRARKGLATDKQLVQH 58
P + EEYLHW Y G R + D V A L D + H
Sbjct: 471 PSSYEEYLHW---YTGATRRYLVPSISDDVEAGSSLQPDDSINLH 512
>02_04_0056 +
19313422-19313967,19314035-19314168,19314263-19314398,
19314870-19314923,19314995-19315135,19315220-19315546,
19315647-19315916,19316080-19316226,19316890-19317045,
19317223-19317290,19318210-19318309,19318696-19318985,
19319074-19319274,19319840-19319902,19320263-19320356,
19320964-19321035,19321979-19322077,19322254-19322376
Length = 1006
Score = 25.4 bits (53), Expect = 5.7
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 11 IDPFWRPCTEEEYLHWGEKYDGVNRAKAYMDSVRARKGLATDKQLVQHAEKQRTLS 66
+DP+W P EE+ + + + + K+ KG ++ A KQR +S
Sbjct: 933 MDPWWNPAVEEQAI---MRIHRIGQTKSVSIKRFIVKGTVEERMEAVQARKQRMIS 985
>02_05_0850 + 32209798-32210086,32210779-32212316
Length = 608
Score = 24.6 bits (51), Expect = 9.9
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 19 TEEEYLHWGEK-YDGVNRAKAYMDSV 43
+ EEY H+GEK +DG A+ Y+ S+
Sbjct: 489 SHEEYQHFGEKSHDGKAWAEMYLLSL 514
>02_05_0435 -
28958422-28958665,28959328-28959462,28960056-28960211,
28960287-28961092,28961177-28961254,28961809-28961883,
28962127-28962215,28962735-28962843,28963007-28963086,
28963739-28963794,28963876-28963958,28964049-28964118,
28964200-28964309,28964395-28964548,28965183-28965382,
28966175-28966348,28969080-28969277,28970564-28970791
Length = 1014
Score = 24.6 bits (51), Expect = 9.9
Identities = 17/61 (27%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 2 LFSHWEVIDIDPFWRPCTEEEYLHWGEKYDGVNRAKAYMDSVRARKGLATDKQLVQHAEK 61
L WEV P WRP +L + +RA A + R GLA + K
Sbjct: 141 LLVSWEVDAAGPPWRPSESTAFLPFAAAAAAGDRAGASLSG--RRNGLAARSSNLSSVRK 198
Query: 62 Q 62
+
Sbjct: 199 R 199
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.132 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,960,955
Number of Sequences: 37544
Number of extensions: 63188
Number of successful extensions: 217
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 210
Number of HSP's gapped (non-prelim): 13
length of query: 69
length of database: 14,793,348
effective HSP length: 49
effective length of query: 20
effective length of database: 12,953,692
effective search space: 259073840
effective search space used: 259073840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)
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