GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001523-TA|BGIBMGA001523-PA|undefined
         (69 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058769-1|AAL13998.1|  949|Drosophila melanogaster SD04694p pro...   120   3e-28
AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-P...   120   3e-28
AE014298-1581|AAF48017.1|  424|Drosophila melanogaster CG11105-P...    27   2.4  
AE014298-1580|AAN09292.1|  488|Drosophila melanogaster CG11105-P...    27   2.4  
AY089551-1|AAL90289.1|  975|Drosophila melanogaster LD28793p pro...    26   7.4  
AE014297-4212|AAF56769.1|  975|Drosophila melanogaster CG4849-PA...    26   7.4  

>AY058769-1|AAL13998.1|  949|Drosophila melanogaster SD04694p
           protein.
          Length = 949

 Score =  120 bits (288), Expect = 3e-28
 Identities = 52/69 (75%), Positives = 59/69 (85%)

Query: 1   MLFSHWEVIDIDPFWRPCTEEEYLHWGEKYDGVNRAKAYMDSVRARKGLATDKQLVQHAE 60
           ++FSHWEVIDIDPFW P TEEE +H+GEK D  NRAK YMDSVR RKGL  D+Q+V+HAE
Sbjct: 881 LMFSHWEVIDIDPFWLPTTEEELMHFGEKADSANRAKVYMDSVRRRKGLFVDEQVVEHAE 940

Query: 61  KQRTLSKNK 69
           KQRTLSKNK
Sbjct: 941 KQRTLSKNK 949


>AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-PB
            protein.
          Length = 1033

 Score =  120 bits (288), Expect = 3e-28
 Identities = 52/69 (75%), Positives = 59/69 (85%)

Query: 1    MLFSHWEVIDIDPFWRPCTEEEYLHWGEKYDGVNRAKAYMDSVRARKGLATDKQLVQHAE 60
            ++FSHWEVIDIDPFW P TEEE +H+GEK D  NRAK YMDSVR RKGL  D+Q+V+HAE
Sbjct: 965  LMFSHWEVIDIDPFWLPTTEEELMHFGEKADSANRAKVYMDSVRRRKGLFVDEQVVEHAE 1024

Query: 61   KQRTLSKNK 69
            KQRTLSKNK
Sbjct: 1025 KQRTLSKNK 1033


>AE014298-1581|AAF48017.1|  424|Drosophila melanogaster CG11105-PA,
           isoform A protein.
          Length = 424

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 14/45 (31%), Positives = 24/45 (53%)

Query: 19  TEEEYLHWGEKYDGVNRAKAYMDSVRARKGLATDKQLVQHAEKQR 63
           T EE+L      D ++R+ +Y    R R  L+  +Q +QH + Q+
Sbjct: 89  TLEEFLEACRNDDAISRSMSYTVPRRRRHQLSAQQQHLQHQKHQQ 133


>AE014298-1580|AAN09292.1|  488|Drosophila melanogaster CG11105-PB,
           isoform B protein.
          Length = 488

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 14/45 (31%), Positives = 24/45 (53%)

Query: 19  TEEEYLHWGEKYDGVNRAKAYMDSVRARKGLATDKQLVQHAEKQR 63
           T EE+L      D ++R+ +Y    R R  L+  +Q +QH + Q+
Sbjct: 153 TLEEFLEACRNDDAISRSMSYTVPRRRRHQLSAQQQHLQHQKHQQ 197


>AY089551-1|AAL90289.1|  975|Drosophila melanogaster LD28793p
           protein.
          Length = 975

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   LFSHWEVIDIDPFWRPCTEEEYLHWGEKYDGVNRAKAYMDSVRARKGLATD 52
           +F HW+++  DP      +   +   E     + A+ +M   R RKGL+ D
Sbjct: 903 VFHHWQIVPGDPL----DKSIIIRPLEPQQASHLAREFMIKTRRRKGLSED 949


>AE014297-4212|AAF56769.1|  975|Drosophila melanogaster CG4849-PA
           protein.
          Length = 975

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   LFSHWEVIDIDPFWRPCTEEEYLHWGEKYDGVNRAKAYMDSVRARKGLATD 52
           +F HW+++  DP      +   +   E     + A+ +M   R RKGL+ D
Sbjct: 903 VFHHWQIVPGDPL----DKSIIIRPLEPQQASHLAREFMIKTRRRKGLSED 949


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.318    0.132    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,219,318
Number of Sequences: 52641
Number of extensions: 100456
Number of successful extensions: 150
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 146
Number of HSP's gapped (non-prelim): 6
length of query: 69
length of database: 24,830,863
effective HSP length: 49
effective length of query: 20
effective length of database: 22,251,454
effective search space: 445029080
effective search space used: 445029080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)