Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001522-TA|BGIBMGA001522-PA|IPR009022|Elongation factor
G, III and V, IPR009000|Translation factor, IPR000795|Protein
synthesis factor, GTP-binding, IPR004161|Elongation factor Tu, domain
2, IPR005517|Elongation factor G, domain IV
(902 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 28 0.33
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 28 0.33
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 28 0.33
AF265213-1|AAF75277.1| 143|Tribolium castaneum putative cytochr... 24 4.0
AY052625-1|AAL15473.1| 135|Tribolium castaneum tryptophan oxyge... 24 5.3
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 24 5.3
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 24 5.3
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 23 7.0
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 23 7.0
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 7.0
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 27.9 bits (59), Expect = 0.33
Identities = 11/43 (25%), Positives = 25/43 (58%)
Query: 393 RREKARQLREELKQNNANINRQSEEKSPHEEQEKSAEDENEKE 435
RR K ++ +K+ N R+ EE+ H++Q++ + + E++
Sbjct: 57 RRMKLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQ 99
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 27.9 bits (59), Expect = 0.33
Identities = 11/43 (25%), Positives = 25/43 (58%)
Query: 393 RREKARQLREELKQNNANINRQSEEKSPHEEQEKSAEDENEKE 435
RR K ++ +K+ N R+ EE+ H++Q++ + + E++
Sbjct: 208 RRMKLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQ 250
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 27.9 bits (59), Expect = 0.33
Identities = 11/43 (25%), Positives = 25/43 (58%)
Query: 393 RREKARQLREELKQNNANINRQSEEKSPHEEQEKSAEDENEKE 435
RR K ++ +K+ N R+ EE+ H++Q++ + + E++
Sbjct: 267 RRMKLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQ 309
>AF265213-1|AAF75277.1| 143|Tribolium castaneum putative cytochrome
P450 monooxigenaseCYP4Q3 protein.
Length = 143
Score = 24.2 bits (50), Expect = 4.0
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 326 VERLMCSRIRDFDSFNIETQKLKEDFLACD 355
+ER + +R + S + ++KL EDF+ C+
Sbjct: 65 LERAIKESLRLYPSVHFISRKLGEDFVTCN 94
>AY052625-1|AAL15473.1| 135|Tribolium castaneum tryptophan
oxygenase protein.
Length = 135
Score = 23.8 bits (49), Expect = 5.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 681 IEITKLLDRSADLLKAISQHIKTLQTLSMNDKLD 714
+EI K L+R +LK + + L+T++ D +D
Sbjct: 29 LEILKRLNRVVLILKVLVDQVMILETMTPLDFMD 62
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 23.8 bits (49), Expect = 5.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 681 IEITKLLDRSADLLKAISQHIKTLQTLSMNDKLD 714
+EI K L+R +LK + + L+T++ D +D
Sbjct: 89 LEILKRLNRVVLILKVLVDQVMILETMTPLDFMD 122
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 23.8 bits (49), Expect = 5.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 681 IEITKLLDRSADLLKAISQHIKTLQTLSMNDKLD 714
+EI K L+R +LK + + L+T++ D +D
Sbjct: 89 LEILKRLNRVVLILKVLVDQVMILETMTPLDFMD 122
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 23.4 bits (48), Expect = 7.0
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 661 ITIYTNNKQSKIKIRAKPIPIEITKLLDRSADLLKAISQH 700
+T Y N K +K+KI P + SA + +S+H
Sbjct: 178 VTAYQNEKITKLKINYNPFAKGFRENGKSSAKRKQLVSEH 217
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 23.4 bits (48), Expect = 7.0
Identities = 9/13 (69%), Positives = 11/13 (84%)
Query: 775 LLNHTADYCTKYL 787
L NHTA+Y +KYL
Sbjct: 166 LYNHTANYDSKYL 178
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 23.4 bits (48), Expect = 7.0
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 388 EEMALRREKARQLREELKQNNANINRQSEEKSPHEEQEKSAEDENEKEKVTFIA 441
+E R R+ R E+ N+ K PHE ++++ + + E ++ ++
Sbjct: 237 KEFHFNRYLTRRRRIEIAHALCLTNKNLVSKPPHEVEKRAQDGQYEYRSLSHVS 290
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.317 0.133 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,235
Number of Sequences: 317
Number of extensions: 8529
Number of successful extensions: 27
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 10
length of query: 902
length of database: 114,650
effective HSP length: 63
effective length of query: 839
effective length of database: 94,679
effective search space: 79435681
effective search space used: 79435681
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)
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