GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001521-TA|BGIBMGA001521-PA|undefined
         (66 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL513122-2|CAI14412.1|  163|Homo sapiens chromosome 9 open readi...    27   9.5  
AF220263-1|AAF89164.1|  163|Homo sapiens MOST2 protein.                27   9.5  

>AL513122-2|CAI14412.1|  163|Homo sapiens chromosome 9 open reading
           frame 31 protein.
          Length = 163

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)

Query: 12  DERLWLTIIRVQSGRPYRNQHVVAAASTRYGTQVPS 47
           ++R  L++IR  SG P  +    AAAST   T+VPS
Sbjct: 109 EQRRTLSLIRKTSGTPTESTVATAAAST---TEVPS 141


>AF220263-1|AAF89164.1|  163|Homo sapiens MOST2 protein.
          Length = 163

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)

Query: 12  DERLWLTIIRVQSGRPYRNQHVVAAASTRYGTQVPS 47
           ++R  L++IR  SG P  +    AAAST   T+VPS
Sbjct: 109 EQRRTLSLIRKTSGTPTESTVATAAAST---TEVPS 141


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.320    0.133    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,948,957
Number of Sequences: 224733
Number of extensions: 342999
Number of successful extensions: 381
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 381
Number of HSP's gapped (non-prelim): 2
length of query: 66
length of database: 73,234,838
effective HSP length: 45
effective length of query: 21
effective length of database: 63,121,853
effective search space: 1325558913
effective search space used: 1325558913
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)