GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001520-TA|BGIBMGA001520-PA|undefined
         (86 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    21   1.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    19   9.8  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    19   9.8  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    19   9.8  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    19   9.8  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    19   9.8  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    19   9.8  

>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
          hormone 2 protein.
          Length = 68

 Score = 21.4 bits (43), Expect = 1.4
 Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 2/32 (6%)

Query: 14 NICMNLVKDIWLFGNHKIVKYSKDTTVDCGKF 45
          N C   V  I L   +KI++      VDC KF
Sbjct: 37 NRCKESVDTIMLI--YKIIQNEAQKLVDCEKF 66


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 18.6 bits (36), Expect = 9.8
 Identities = 6/23 (26%), Positives = 11/23 (47%)

Query: 46  VCLRSQFTEIRDRAYGNSSKASN 68
           +C R Q+ ++  +  GN     N
Sbjct: 86  LCKRQQYCQLMSKLLGNHQLVYN 108


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 18.6 bits (36), Expect = 9.8
 Identities = 8/27 (29%), Positives = 13/27 (48%)

Query: 48  LRSQFTEIRDRAYGNSSKASNYDSGLK 74
           L  +FT++ DR    S   +  +S  K
Sbjct: 241 LAYRFTQVTDRTQSMSESKNKSESAWK 267


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 18.6 bits (36), Expect = 9.8
 Identities = 8/27 (29%), Positives = 13/27 (48%)

Query: 48  LRSQFTEIRDRAYGNSSKASNYDSGLK 74
           L  +FT++ DR    S   +  +S  K
Sbjct: 241 LAYRFTQVTDRTQSMSESKNKSESAWK 267


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 18.6 bits (36), Expect = 9.8
 Identities = 8/27 (29%), Positives = 13/27 (48%)

Query: 48  LRSQFTEIRDRAYGNSSKASNYDSGLK 74
           L  +FT++ DR    S   +  +S  K
Sbjct: 241 LAYRFTQVTDRTQSMSESKNKSESAWK 267


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 18.6 bits (36), Expect = 9.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 54  EIRDRAYGNSSKASNYDS 71
           +IRD  YG  +  +N D+
Sbjct: 350 KIRDFYYGGPNSENNLDN 367


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 18.6 bits (36), Expect = 9.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 54  EIRDRAYGNSSKASNYDS 71
           +IRD  YG  +  +N D+
Sbjct: 352 KIRDFYYGGPNSENNLDN 369


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.134    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,440
Number of Sequences: 317
Number of extensions: 687
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 86
length of database: 114,650
effective HSP length: 47
effective length of query: 39
effective length of database: 99,751
effective search space:  3890289
effective search space used:  3890289
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.5 bits)
S2: 36 (18.6 bits)