Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001518-TA|BGIBMGA001518-PA|undefined
(398 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 31 1.9
AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical ... 30 2.5
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 30 3.3
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 30 3.3
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 30 3.3
U21309-1|AAN73881.1| 397|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z67884-2|CAA91808.1| 429|Caenorhabditis elegans Hypothetical pr... 29 5.8
U64854-5|AAB18317.1| 422|Caenorhabditis elegans Hypothetical pr... 29 5.8
U03059-1|AAA88795.1| 422|Caenorhabditis elegans ornithine decar... 29 5.8
AC024214-5|AAF36077.2| 605|Caenorhabditis elegans Hypothetical ... 29 5.8
AC024214-4|AAM97985.2| 603|Caenorhabditis elegans Hypothetical ... 29 5.8
AC024214-3|AAU05554.1| 577|Caenorhabditis elegans Hypothetical ... 29 5.8
AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical ... 29 7.6
>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
protein F52G3.1 protein.
Length = 1172
Score = 30.7 bits (66), Expect = 1.9
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 216 NNLSHHNVASKGNGNDESLLSSVDQLSERIIVPSLIAPSQSYAKVVA----VQNNDGFTS 271
N SHH+ +K + N S ++L E V S + + ++N DGF
Sbjct: 568 NVSSHHSDDAKKHMNGHSKKKETEKLKENGDVKKFNIEDCSNVNIESWADEMENMDGFEE 627
Query: 272 VQSKKKRN 279
V SKKK+N
Sbjct: 628 VNSKKKKN 635
>AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical
protein F19B2.6 protein.
Length = 807
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/79 (22%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 170 FTSQESNSGC-EEQVLIKNLSSNSINTENLIEG-SGIKLRRYELNGSDNN-----LSHHN 222
F S +S S +E V ++++ + +N +E ++ ++ +L S + ++H+N
Sbjct: 530 FPSDDSMSQTSQEPVSVESIRKKTKRAKNKLEARKSLQKKKDDLKASRKSWEEVKINHNN 589
Query: 223 VASKGNGNDESLLSSVDQL 241
+ S N N+E++ ++ DQ+
Sbjct: 590 ILSSNNSNEENIKTAFDQV 608
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 29.9 bits (64), Expect = 3.3
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 168 MEFTSQESNSGCEEQVLIKNLSSNSINTENLIEGSGIKLRRYEL 211
ME+ +QE +S EQ+ I + + E L+ GS I+ RY L
Sbjct: 86 MEYENQEQSSKIMEQMRILRQTEELCDVELLVAGSVIRAHRYIL 129
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 29.9 bits (64), Expect = 3.3
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 168 MEFTSQESNSGCEEQVLIKNLSSNSINTENLIEGSGIKLRRYEL 211
ME+ +QE +S EQ+ I + + E L+ GS I+ RY L
Sbjct: 86 MEYENQEQSSKIMEQMRILRQTEELCDVELLVAGSVIRAHRYIL 129
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 29.9 bits (64), Expect = 3.3
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Query: 129 KSSYVTQDEMQDLRTKCDMISMSSTNINTKRGAFCNKIDMEFTSQESNSGCEEQVLIKNL 188
KS + +E Q ++ +++ + + + K+ K ++ S+ES SG EE+ ++K
Sbjct: 325 KSKKESDEEQQASDSEEEVVEVKKNSKSPKKTP--KKTAVKEESEES-SGDEEEEVVKKK 381
Query: 189 SSNSINTENLIEGSGIKLRRYELNGSDNNLSHHNVASKGNGNDESLLSSVDQLSE 243
S+ IN E S + E + S + K +ES S D E
Sbjct: 382 KSSKINKRKAKESSSDEEEEVEESPKKKTKSPRKSSKKSAAKEESEEESSDNEEE 436
>U21309-1|AAN73881.1| 397|Caenorhabditis elegans Hypothetical
protein C13B9.2 protein.
Length = 397
Score = 29.5 bits (63), Expect = 4.4
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 188 LSSNSINTENLIEGSGIKLRRYE---LNGSDNNLSHHNVASKGNGNDESLLSSVDQLSER 244
++ SI + +L++ S + + Y L G + + KG N E +LS +D L R
Sbjct: 255 ITEKSITSSHLLKNSNLTIENYPIALLFGGETTVHLSENPGKGGRNQEMVLSCLDALKTR 314
Query: 245 I 245
+
Sbjct: 315 V 315
>Z67884-2|CAA91808.1| 429|Caenorhabditis elegans Hypothetical
protein T14G8.4 protein.
Length = 429
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 308 ITNVNKATLESDITDYI--YKKTGENVTLEGINIKQQCEHNAYKFIVSQRKLHMFMDDKL 365
+ N+N A +S T ++ Y E+ T +N+ H+ Y+F++ + H+ +DD+
Sbjct: 251 VVNLNAALRQSLYTVFVENYLDYEEDQTAHNLNVASTALHDHYQFLIQEG--HLAIDDQN 308
Query: 366 WP 367
P
Sbjct: 309 VP 310
>U64854-5|AAB18317.1| 422|Caenorhabditis elegans Hypothetical
protein K11C4.4 protein.
Length = 422
Score = 29.1 bits (62), Expect = 5.8
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 177 SGCEEQVLIKNLSSNSINTENLIEGSGIKLRRYELNGSDNNLSHHNVASK 226
SGC + +N ++ N + EG G K+ ++ G HHN K
Sbjct: 203 SGCNDASAYRNALQHAKNLCEIGEGLGFKMDIIDMGGGFPGAEHHNPFEK 252
>U03059-1|AAA88795.1| 422|Caenorhabditis elegans ornithine
decarboxylase protein.
Length = 422
Score = 29.1 bits (62), Expect = 5.8
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 177 SGCEEQVLIKNLSSNSINTENLIEGSGIKLRRYELNGSDNNLSHHNVASK 226
SGC + +N ++ N + EG G K+ ++ G HHN K
Sbjct: 203 SGCNDASAYRNALQHAKNLCEIGEGLGFKMDIIDMGGGFPGAEHHNPFEK 252
>AC024214-5|AAF36077.2| 605|Caenorhabditis elegans Hypothetical
protein Y77E11A.7a protein.
Length = 605
Score = 29.1 bits (62), Expect = 5.8
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 302 RKTPMFITN---VNKATLESDI---TDYIYKKTGENVTLEGINIKQQCEHNAYKFIVSQR 355
RKTP ++ V + L SD T + +TGE E IN KQ E Y +++
Sbjct: 310 RKTPKLYSDTRSVAQELLRSDSPLQTVQRFVETGETDPREIINKKQAYEMRRYVMANARK 369
Query: 356 KLHMFMDD 363
++H MDD
Sbjct: 370 RMHRRMDD 377
>AC024214-4|AAM97985.2| 603|Caenorhabditis elegans Hypothetical
protein Y77E11A.7b protein.
Length = 603
Score = 29.1 bits (62), Expect = 5.8
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 302 RKTPMFITN---VNKATLESDI---TDYIYKKTGENVTLEGINIKQQCEHNAYKFIVSQR 355
RKTP ++ V + L SD T + +TGE E IN KQ E Y +++
Sbjct: 308 RKTPKLYSDTRSVAQELLRSDSPLQTVQRFVETGETDPREIINKKQAYEMRRYVMANARK 367
Query: 356 KLHMFMDD 363
++H MDD
Sbjct: 368 RMHRRMDD 375
>AC024214-3|AAU05554.1| 577|Caenorhabditis elegans Hypothetical
protein Y77E11A.7c protein.
Length = 577
Score = 29.1 bits (62), Expect = 5.8
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 302 RKTPMFITN---VNKATLESDI---TDYIYKKTGENVTLEGINIKQQCEHNAYKFIVSQR 355
RKTP ++ V + L SD T + +TGE E IN KQ E Y +++
Sbjct: 282 RKTPKLYSDTRSVAQELLRSDSPLQTVQRFVETGETDPREIINKKQAYEMRRYVMANARK 341
Query: 356 KLHMFMDD 363
++H MDD
Sbjct: 342 RMHRRMDD 349
>AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical
protein Y40B1B.7 protein.
Length = 123
Score = 28.7 bits (61), Expect = 7.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 123 AEIKAIKSSYVTQDEMQDLRTKCDMISMSSTNINTKR 159
+EIK +K+ T D+ +L+ K DM+ NI K+
Sbjct: 29 SEIKKVKTLKSTWDKKMELKAKKDMVKRVQDNIREKQ 65
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.129 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,925,835
Number of Sequences: 27539
Number of extensions: 351557
Number of successful extensions: 750
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 745
Number of HSP's gapped (non-prelim): 13
length of query: 398
length of database: 12,573,161
effective HSP length: 83
effective length of query: 315
effective length of database: 10,287,424
effective search space: 3240538560
effective search space used: 3240538560
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 61 (28.7 bits)
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