GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001517-TA|BGIBMGA001517-PA|undefined
         (96 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   0.56 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   6.9  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 0.56
 Identities = 10/17 (58%), Positives = 13/17 (76%)

Query: 49  SSSTGDNHAAFSSVSTH 65
           SSST  N++A+SS S H
Sbjct: 143 SSSTWCNYSAYSSASRH 159


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 10/31 (32%), Positives = 13/31 (41%)

Query: 20   TSPAWQLCITWTTHDTHATFKLSLDSPQTSS 50
            TSP W    T  T  T  T   +   P T++
Sbjct: 1048 TSPWWTTTTTRRTTTTRPTTTSTTTRPTTTN 1078


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.123    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,992
Number of Sequences: 317
Number of extensions: 546
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 96
length of database: 114,650
effective HSP length: 48
effective length of query: 48
effective length of database: 99,434
effective search space:  4772832
effective search space used:  4772832
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.1 bits)
S2: 37 (19.0 bits)