GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001516-TA|BGIBMGA001516-PA|undefined
         (63 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   0.79 
DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide...    20   7.4  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 0.79
 Identities = 11/15 (73%), Positives = 11/15 (73%)

Query: 11  AERVRGFKSDPEKVR 25
           AERV    SDPEKVR
Sbjct: 839 AERVARTHSDPEKVR 853


>DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide F
           prepropeptide protein.
          Length = 234

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/25 (32%), Positives = 16/25 (64%)

Query: 5   SDDTALAERVRGFKSDPEKVREATE 29
           S+  A  +R+R  +SDP   ++++E
Sbjct: 193 SEKRAPTQRLRWGRSDPALAKDSSE 217


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.129    0.347 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,070
Number of Sequences: 2123
Number of extensions: 1036
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 63
length of database: 516,269
effective HSP length: 42
effective length of query: 21
effective length of database: 427,103
effective search space:  8969163
effective search space used:  8969163
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.5 bits)
S2: 39 (19.8 bits)