GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001515-TA|BGIBMGA001515-PA|IPR009947|NADH:ubiquinone
oxidoreductase subunit B14.5a
         (102 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   0.95 
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   2.2  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   2.9  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    22   3.8  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      21   8.9  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    21   8.9  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    21   8.9  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 20   DILLGRKHNLHGRFPPLMSPRSVPTPEIPRG-PDNQYSK 57
            + L+G    + G     M P + P P  P G P +Q+S+
Sbjct: 1249 EYLMGSTQAIAGLAQGSMGPHTPPPPNTPNGMPTHQHSQ 1287


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 19  RDILLGRKHNLHGRFPPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVA 78
           RD+L        G   P  SPR  PTP   R       +Q   +R+      P      A
Sbjct: 181 RDVLNSLLAAKVGGGQPSASPRQPPTPLPRRSSAQPQQQQQQQQRNQHEQEQPRASTSRA 240

Query: 79  EGPPMNQDPTKKAQPGGIKPD 99
             PP ++  T  A  G + P+
Sbjct: 241 VMPPRSEALT--AVRGDVVPE 259


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 34  PPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAINSVFPPI 73
           P  +SP  VP P + +  D Q S++     + +    PP+
Sbjct: 791 PSSLSPGGVPRPTVLQKLDPQLSEEAAAVGANVEQRVPPL 830



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 6/60 (10%)

Query: 48  PRGPDNQYSK-QYYYKRSAINSVFP-PIVAPVAEG----PPMNQDPTKKAQPGGIKPDTV 101
           P G D Q S        S++++  P P  +  A+G    PP    P     PGG+   TV
Sbjct: 745 PMGGDQQNSNGSSSTASSSVSTGMPSPSRSAFADGIGSPPPPPPPPPSSLSPGGVPRPTV 804


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 54  QYSKQYYYKRSAINSVFPP 72
           QY KQ+ Y+  ++  VF P
Sbjct: 116 QYFKQHGYRTHSVGKVFHP 134


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/19 (47%), Positives = 10/19 (52%)

Query: 35  PLMSPRSVPTPEIPRGPDN 53
           P  SPR+  TPE P    N
Sbjct: 161 PPYSPRTTTTPEPPLADPN 179


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 67  NSVFPPIVAPVAEGPPMNQDPTKKAQPGGIKP 98
           N+V PP  A   + PP+   P   +Q    +P
Sbjct: 625 NNVIPPPSAYQQQQPPVVPPPRTNSQSQASEP 656


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 46  EIPRGPDNQYSKQYYYKRSAINSVFPPI 73
           E P GP N   ++YY     + + F PI
Sbjct: 231 EWPDGPSNHSRQEYYNIVFMLLTYFLPI 258


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.139    0.437 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,195
Number of Sequences: 2123
Number of extensions: 5316
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 8
length of query: 102
length of database: 516,269
effective HSP length: 55
effective length of query: 47
effective length of database: 399,504
effective search space: 18776688
effective search space used: 18776688
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)