Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001515-TA|BGIBMGA001515-PA|IPR009947|NADH:ubiquinone
oxidoreductase subunit B14.5a
(102 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr... 33 0.048
U34778-1|AAA97606.1| 418|Caenorhabditis elegans sma-2 protein. 30 0.25
U10327-1|AAC46583.1| 418|Caenorhabditis elegans MAD homolog 1 p... 30 0.25
M98552-8|AAA28204.3| 418|Caenorhabditis elegans Small protein 2... 30 0.25
Z81074-8|CAB03043.1| 413|Caenorhabditis elegans Hypothetical pr... 29 0.44
U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical pr... 29 0.59
Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical pr... 29 0.78
AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical... 29 0.78
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 1.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 1.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 1.0
Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical p... 28 1.4
U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical pr... 27 1.8
AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical ... 27 1.8
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 27 3.1
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 26 5.5
Z78200-9|CAB01583.2| 368|Caenorhabditis elegans Hypothetical pr... 25 7.2
U61947-14|ABA29341.1| 413|Caenorhabditis elegans Nuclear hormon... 25 7.2
U61947-13|AAB03131.3| 429|Caenorhabditis elegans Nuclear hormon... 25 7.2
AY204189-1|AAO39193.1| 429|Caenorhabditis elegans nuclear recep... 25 7.2
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 25 7.2
AF000263-10|AAM22070.1| 163|Caenorhabditis elegans Hypothetical... 25 7.2
AF000263-9|AAO21391.2| 184|Caenorhabditis elegans Hypothetical ... 25 7.2
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 25 7.2
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 25 7.2
Z81538-3|CAB04385.1| 168|Caenorhabditis elegans Hypothetical pr... 25 9.6
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 25 9.6
U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane p... 25 9.6
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 25 9.6
U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein... 25 9.6
U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein... 25 9.6
U00052-1|AAK95880.2| 308|Caenorhabditis elegans Hypothetical pr... 25 9.6
AL132952-21|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 25 9.6
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 25 9.6
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 25 9.6
>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
C27F2.8 protein.
Length = 1715
Score = 32.7 bits (71), Expect = 0.048
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 42 VPTPEIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVAEGPPM--NQDPTKKAQPG 94
V PE P + K+ ++ N P IV PV + PP+ +P KK PG
Sbjct: 1249 VTDPEPPMSKSQRKKKRAAQQKENNNLEAPIIVQPVVQSPPVQNKMEPAKKTTPG 1303
>U34778-1|AAA97606.1| 418|Caenorhabditis elegans sma-2 protein.
Length = 418
Score = 30.3 bits (65), Expect = 0.25
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 59 YYYKRSAINSVFPPIVAP-VAEGPPMNQDPT 88
Y+YKR V PP++ P +E PP PT
Sbjct: 123 YHYKRVHATGVLPPVLVPRYSEKPPQEVPPT 153
>U10327-1|AAC46583.1| 418|Caenorhabditis elegans MAD homolog 1
protein.
Length = 418
Score = 30.3 bits (65), Expect = 0.25
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 59 YYYKRSAINSVFPPIVAP-VAEGPPMNQDPT 88
Y+YKR V PP++ P +E PP PT
Sbjct: 123 YHYKRVHATGVLPPVLVPRYSEKPPQEVPPT 153
>M98552-8|AAA28204.3| 418|Caenorhabditis elegans Small protein 2
protein.
Length = 418
Score = 30.3 bits (65), Expect = 0.25
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 59 YYYKRSAINSVFPPIVAP-VAEGPPMNQDPT 88
Y+YKR V PP++ P +E PP PT
Sbjct: 123 YHYKRVHATGVLPPVLVPRYSEKPPQEVPPT 153
>Z81074-8|CAB03043.1| 413|Caenorhabditis elegans Hypothetical
protein F32B6.9 protein.
Length = 413
Score = 29.5 bits (63), Expect = 0.44
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 30 HGRFPPLMSPRSVPTPEIPRGPDNQYSKQ 58
H PP + P P IP+ P ++YSKQ
Sbjct: 343 HEMHPPTKDGETSPIPRIPQLPHSKYSKQ 371
>U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical
protein F49E10.5 protein.
Length = 727
Score = 29.1 bits (62), Expect = 0.59
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Query: 39 PRSVPTPEIPRGPDNQYSKQY-----YYKRSAINSVFPPIVAPVAEGPPMNQDP 87
P P PE P G YSK+ +Y + F P +P PP+ DP
Sbjct: 103 PARFPRPESPSGDSPSYSKKSRSFRDFYPSLSSTPSFDPAQSPHTPHPPVLPDP 156
>Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical protein
Y6B3B.1 protein.
Length = 1829
Score = 28.7 bits (61), Expect = 0.78
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 20 DILLGRKHNLHGRFPPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVAE 79
D+LLG+ + PP + R+ + +G ++Q S+ PPI P+ E
Sbjct: 986 DVLLGQGSGVCSTSPP--ATRTSEDQDSTQGSEDQSDPTSRIPTCFEVSMDPPISEPIIE 1043
Query: 80 GPPMNQDP 87
NQDP
Sbjct: 1044 AAIKNQDP 1051
>AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 28.7 bits (61), Expect = 0.78
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 20 DILLGRKHNLHGRFPPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVAE 79
D+LLG+ + PP + R+ + +G ++Q S+ PPI P+ E
Sbjct: 986 DVLLGQGSGVCSTSPP--ATRTSEDQDSTQGSEDQSDPTSRIPTCFEVSMDPPISEPIIE 1043
Query: 80 GPPMNQDP 87
NQDP
Sbjct: 1044 AAIKNQDP 1051
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 1.0
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 40 RSVPTPEIPRGPDNQYSKQYYYKRSAINSVFPPIVA--PVAEG-PPMNQDPTKKAQPGGI 96
+ + P+IP P + + + +S PPI P G PP+ P PGG+
Sbjct: 676 KHINDPKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGL 735
Query: 97 KPDT 100
P T
Sbjct: 736 PPIT 739
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 1.0
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 40 RSVPTPEIPRGPDNQYSKQYYYKRSAINSVFPPIVA--PVAEG-PPMNQDPTKKAQPGGI 96
+ + P+IP P + + + +S PPI P G PP+ P PGG+
Sbjct: 676 KHINDPKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGL 735
Query: 97 KPDT 100
P T
Sbjct: 736 PPIT 739
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 1.0
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 40 RSVPTPEIPRGPDNQYSKQYYYKRSAINSVFPPIVA--PVAEG-PPMNQDPTKKAQPGGI 96
+ + P+IP P + + + +S PPI P G PP+ P PGG+
Sbjct: 259 KHINDPKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGL 318
Query: 97 KPDT 100
P T
Sbjct: 319 PPIT 322
>Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 27.9 bits (59), Expect = 1.4
Identities = 19/71 (26%), Positives = 29/71 (40%)
Query: 22 LLGRKHNLHGRFPPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVAEGP 81
L+G ++ RF P + R+ T +P P + YY R++ + AP G
Sbjct: 93 LVGNSYDPPVRFDPPYAYRATATGYMPTVPGLSTNSSPYYPRTSGYAAGQQFYAPSLSGV 152
Query: 82 PMNQDPTKKAQ 92
P Q AQ
Sbjct: 153 PNTQQLILAAQ 163
>Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical
protein M04G12.4b protein.
Length = 550
Score = 27.9 bits (59), Expect = 1.4
Identities = 19/71 (26%), Positives = 29/71 (40%)
Query: 22 LLGRKHNLHGRFPPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVAEGP 81
L+G ++ RF P + R+ T +P P + YY R++ + AP G
Sbjct: 64 LVGNSYDPPVRFDPPYAYRATATGYMPTVPGLSTNSSPYYPRTSGYAAGQQFYAPSLSGV 123
Query: 82 PMNQDPTKKAQ 92
P Q AQ
Sbjct: 124 PNTQQLILAAQ 134
>Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 27.9 bits (59), Expect = 1.4
Identities = 19/71 (26%), Positives = 29/71 (40%)
Query: 22 LLGRKHNLHGRFPPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVAEGP 81
L+G ++ RF P + R+ T +P P + YY R++ + AP G
Sbjct: 93 LVGNSYDPPVRFDPPYAYRATATGYMPTVPGLSTNSSPYYPRTSGYAAGQQFYAPSLSGV 152
Query: 82 PMNQDPTKKAQ 92
P Q AQ
Sbjct: 153 PNTQQLILAAQ 163
>U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical
protein T12E12.3 protein.
Length = 818
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 34 PPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVAEGPPMNQDPTKKA-- 91
P +PRS P PR P + + ++++ PP V P ++ + + +A
Sbjct: 271 PDQPAPRSKILPWRPRTPAGHRDRSPSSPMAHLDNIQPPSPIQVVSNPTLSSELSSRASR 330
Query: 92 -QPGGIKP 98
QPG +P
Sbjct: 331 DQPGPSRP 338
>AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical
protein Y37A1B.2b protein.
Length = 592
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 8/53 (15%)
Query: 38 SPRSVPTPEIPRGPDNQYS-------KQYYYKRSAIN-SVFPPIVAPVAEGPP 82
SP + P + D Q+S K + K AI+ SV PP + P + GPP
Sbjct: 54 SPHKMKPPILMEEEDEQHSTGKHSSRKSSFKKSGAISKSVLPPPLPPTSSGPP 106
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 64 SAINSVFPPIVAPVAEGPPMNQDPTKKAQP 93
S++N V P + P++ GP +N DP P
Sbjct: 686 SSMNPV-PSLAVPMSPGPYLNSDPPSPVSP 714
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 64 SAINSVFPPIVAPVAEGPPMNQDPTKKAQPGGIKPD 99
+A+++ PP P A PP P K +P +P+
Sbjct: 702 TAVDAAAPPRPPPAARPPPPRPAPANKEKPKEPEPE 737
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 64 SAINSVFPPIVAPVAEGPPMNQDPTKKAQP 93
S++N V P + P++ GP +N DP P
Sbjct: 686 SSMNPV-PSLAVPMSPGPYLNSDPPSPVSP 714
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 64 SAINSVFPPIVAPVAEGPPMNQDPTKKAQP 93
S++N V P + P++ GP +N DP P
Sbjct: 686 SSMNPV-PSLAVPMSPGPYLNSDPPSPVSP 714
>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 54 QYSKQYYYKRSAINSVFPPIVAPVAEG 80
Q S++ K++ IN VFP I +P EG
Sbjct: 1613 QISQKLQTKKAYINFVFPAIDSPCGEG 1639
>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 54 QYSKQYYYKRSAINSVFPPIVAPVAEG 80
Q S++ K++ IN VFP I +P EG
Sbjct: 1613 QISQKLQTKKAYINFVFPAIDSPCGEG 1639
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Query: 31 GRFPPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVAEGPP 82
G PP P + P P RG + Y + +PP P+ GPP
Sbjct: 148 GMMPPRGMPGAYPPP---RGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPP 196
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Query: 31 GRFPPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVAEGPP 82
G PP P + P P RG + Y + +PP P+ GPP
Sbjct: 148 GMMPPRGMPGAYPPP---RGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPP 196
>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 54 QYSKQYYYKRSAINSVFPPIVAPVAEG 80
Q S++ K++ IN VFP I +P EG
Sbjct: 1613 QISQKLQTKKAYINFVFPAIDSPCGEG 1639
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 25.8 bits (54), Expect = 5.5
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Query: 39 PRSVPTPEIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVAEGPPMNQ----DPTKKAQP 93
P P+ P+G D K A NS P APV P + +PT +A P
Sbjct: 118 PAGDPSKTKPQGGDPAKPKPQTGDPYATNSTVKPATAPVTPEPTVKNTTAAEPTTEAPP 176
>Z78200-9|CAB01583.2| 368|Caenorhabditis elegans Hypothetical
protein T04H1.6 protein.
Length = 368
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 31 GRFPPLMSPRSVPTPEIPRGPDNQYSKQYYYKR 63
G P P +P + P PDN Y+ Y KR
Sbjct: 97 GIVEPGTIPPPMPQTQAPEKPDNSYAINYCDKR 129
>U61947-14|ABA29341.1| 413|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 105, isoform b protein.
Length = 413
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 19 RDILLGRKHNLHGRFPPLMSPRSVPTP 45
RD++ R N P+ SP S+PTP
Sbjct: 115 RDVIGRRVRNNSSDSSPISSPPSIPTP 141
>U61947-13|AAB03131.3| 429|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 105, isoform a protein.
Length = 429
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 19 RDILLGRKHNLHGRFPPLMSPRSVPTP 45
RD++ R N P+ SP S+PTP
Sbjct: 115 RDVIGRRVRNNSSDSSPISSPPSIPTP 141
>AY204189-1|AAO39193.1| 429|Caenorhabditis elegans nuclear receptor
NHR-105 protein.
Length = 429
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 19 RDILLGRKHNLHGRFPPLMSPRSVPTP 45
RD++ R N P+ SP S+PTP
Sbjct: 115 RDVIGRRVRNNSSDSSPISSPPSIPTP 141
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 33 FPPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAINS 68
FP + +P + P IPR +N+ S+ + R A S
Sbjct: 26 FPIMTTPATQPEISIPRSGENKSSRSPSWAREARRS 61
>AF000263-10|AAM22070.1| 163|Caenorhabditis elegans Hypothetical
protein T08B2.5d protein.
Length = 163
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 33 FPPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAINS 68
FP + +P + P IPR +N+ S+ + R A S
Sbjct: 84 FPIMTTPATQPEISIPRSGENKSSRSPSWAREARRS 119
>AF000263-9|AAO21391.2| 184|Caenorhabditis elegans Hypothetical
protein T08B2.5e protein.
Length = 184
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 33 FPPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAINS 68
FP + +P + P IPR +N+ S+ + R A S
Sbjct: 105 FPIMTTPATQPEISIPRSGENKSSRSPSWAREARRS 140
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 33 FPPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAINS 68
FP + +P + P IPR +N+ S+ + R A S
Sbjct: 84 FPIMTTPATQPEISIPRSGENKSSRSPSWAREARRS 119
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 33 FPPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAINS 68
FP + +P + P IPR +N+ S+ + R A S
Sbjct: 85 FPIMTTPATQPEISIPRSGENKSSRSPSWAREARRS 120
>Z81538-3|CAB04385.1| 168|Caenorhabditis elegans Hypothetical
protein F45H10.3 protein.
Length = 168
Score = 25.0 bits (52), Expect = 9.6
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 32 RFPPLMSPR--SVPTPEIPRGPDNQYSKQYYYKRSAINSVFPPIV 74
RFP S R S P +P G ++ + YY R +V P V
Sbjct: 55 RFPNTQSARPCSAELPALPGGVHHKLADNYYLTRDGRRNVDAPKV 99
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical
protein M02E1.1a protein.
Length = 1077
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 28 NLHGRFPPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAIN 67
+ +GR P ++ PR+ IP G D+ + +K++ ++
Sbjct: 896 SFNGRPPSVVRPRTAFDMNIPYGTDSNFIGAKQFKKNTLS 935
>U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane
protein protein.
Length = 428
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 14 GLKIFRDILLGRKHNLHGRFP 34
G I RD+L GR+ + G FP
Sbjct: 222 GFHILRDLLNGREWEVSGNFP 242
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 25.0 bits (52), Expect = 9.6
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 70 FPPIVAPVAEGPPMNQDPTKKAQPGGIKP 98
F P AP + GPP DP+ AQP G P
Sbjct: 290 FDPSGAPPSGGPPGPFDPS-GAQPSGGPP 317
>U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein 1,
isoform b protein.
Length = 383
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 14 GLKIFRDILLGRKHNLHGRFP 34
G I RD+L GR+ + G FP
Sbjct: 222 GFHILRDLLNGREWEVSGNFP 242
>U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein 1,
isoform a protein.
Length = 428
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 14 GLKIFRDILLGRKHNLHGRFP 34
G I RD+L GR+ + G FP
Sbjct: 222 GFHILRDLLNGREWEVSGNFP 242
>U00052-1|AAK95880.2| 308|Caenorhabditis elegans Hypothetical
protein K02F3.5 protein.
Length = 308
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 44 TPEIPRGPDNQYSKQYY--YKRSAINSVFPPIVAPVAE 79
TP+ G Y + Y Y R++I+ + PP+ P+ +
Sbjct: 79 TPQADYGNPYSYPRPYSRTYHRNSISPIRPPVPMPIPQ 116
>AL132952-21|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 25.0 bits (52), Expect = 9.6
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Query: 29 LHGRFPPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVAEGPPMNQDPT 88
+ G+ PP SP + + + +Q Y++ A S+ + AP A P Q
Sbjct: 325 MRGQLPPRNSPAANAINRV-----REQQQQMYHQAGARGSLQQRVPAPAAPTPGSYQHIV 379
Query: 89 KKAQPGGIKP 98
GG P
Sbjct: 380 NAVPVGGANP 389
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 34 PPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVAEGPPMNQ 85
PP P SVP P GP + + + + +F ++P PP+ +
Sbjct: 282 PPSPRPTSVPPPIPSPGPSEDVNMDELIESFSDSVIFNNSMSPPPPLPPLRE 333
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 34 PPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVAEGPPMNQ 85
PP P SVP P GP + + + + +F ++P PP+ +
Sbjct: 282 PPSPRPTSVPPPIPSPGPSEDVNMDELIESFSDSVIFNNSMSPPPPLPPLRE 333
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.139 0.437
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,121,102
Number of Sequences: 27539
Number of extensions: 140524
Number of successful extensions: 463
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 413
Number of HSP's gapped (non-prelim): 68
length of query: 102
length of database: 12,573,161
effective HSP length: 71
effective length of query: 31
effective length of database: 10,617,892
effective search space: 329154652
effective search space used: 329154652
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 52 (25.0 bits)
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