GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001514-TA|BGIBMGA001514-PA|undefined
         (77 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99716-3|CAI41690.1|  184|Homo sapiens protein ( Human DNA seque...    27   9.2  
EF064710-1|ABK41893.1|  184|Homo sapiens tumor necrosis factor r...    27   9.2  
BC112030-1|AAI12031.1|  184|Homo sapiens BAFF receptor protein.        27   9.2  
BC105123-1|AAI05124.1|  184|Homo sapiens BAFF receptor protein.        27   9.2  
AJ556110-1|CAD88640.1|  121|Homo sapiens prostate apoptosis resp...    27   9.2  
AF373846-1|AAK91826.1|  184|Homo sapiens BAFF receptor protein.        27   9.2  
AB222990-1|BAE16554.1|  184|Homo sapiens BAFF-R protein.               27   9.2  
AB108448-1|BAC99030.1|  121|Homo sapiens prostate apoptosis resp...    27   9.2  

>Z99716-3|CAI41690.1|  184|Homo sapiens protein ( Human DNA sequence
           from clone CTA-250D10 on chromosome 22. ).
          Length = 184

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/26 (46%), Positives = 13/26 (50%)

Query: 3   VDWGRAQARKRGAADPTLGDGGADLP 28
           V W R Q R RGA+     DG  D P
Sbjct: 99  VSWRRRQRRLRGASSAEAPDGDKDAP 124


>EF064710-1|ABK41893.1|  184|Homo sapiens tumor necrosis factor
           receptor superfamily, member 13C protein.
          Length = 184

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/26 (46%), Positives = 13/26 (50%)

Query: 3   VDWGRAQARKRGAADPTLGDGGADLP 28
           V W R Q R RGA+     DG  D P
Sbjct: 99  VSWRRRQRRLRGASSAEAPDGDKDAP 124


>BC112030-1|AAI12031.1|  184|Homo sapiens BAFF receptor protein.
          Length = 184

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/26 (46%), Positives = 13/26 (50%)

Query: 3   VDWGRAQARKRGAADPTLGDGGADLP 28
           V W R Q R RGA+     DG  D P
Sbjct: 99  VSWRRRQRRLRGASSAEAPDGDKDAP 124


>BC105123-1|AAI05124.1|  184|Homo sapiens BAFF receptor protein.
          Length = 184

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/26 (46%), Positives = 13/26 (50%)

Query: 3   VDWGRAQARKRGAADPTLGDGGADLP 28
           V W R Q R RGA+     DG  D P
Sbjct: 99  VSWRRRQRRLRGASSAEAPDGDKDAP 124


>AJ556110-1|CAD88640.1|  121|Homo sapiens prostate apoptosis
          response-4 protein.
          Length = 121

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 5  WGRAQARKRGAADPTLGDGG-ADLPLRADFTAPP 37
          W R++  +  A   TLG GG   LPL A F   P
Sbjct: 49 WARSRTPRGAARGQTLGSGGDLTLPLPAPFCLSP 82


>AF373846-1|AAK91826.1|  184|Homo sapiens BAFF receptor protein.
          Length = 184

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/26 (46%), Positives = 13/26 (50%)

Query: 3   VDWGRAQARKRGAADPTLGDGGADLP 28
           V W R Q R RGA+     DG  D P
Sbjct: 99  VSWRRRQRRLRGASSAEAPDGDKDAP 124


>AB222990-1|BAE16554.1|  184|Homo sapiens BAFF-R protein.
          Length = 184

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/26 (46%), Positives = 13/26 (50%)

Query: 3   VDWGRAQARKRGAADPTLGDGGADLP 28
           V W R Q R RGA+     DG  D P
Sbjct: 99  VSWRRRQRRLRGASSAEAPDGDKDAP 124


>AB108448-1|BAC99030.1|  121|Homo sapiens prostate apoptosis
          response-4 protein.
          Length = 121

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 5  WGRAQARKRGAADPTLGDGG-ADLPLRADFTAPP 37
          W R++  +  A   TLG GG   LPL A F   P
Sbjct: 49 WARSRTPRGAARGQTLGSGGDLTLPLPAPFCLSP 82


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.322    0.137    0.448 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,948,010
Number of Sequences: 224733
Number of extensions: 256018
Number of successful extensions: 454
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 448
Number of HSP's gapped (non-prelim): 8
length of query: 77
length of database: 73,234,838
effective HSP length: 56
effective length of query: 21
effective length of database: 60,649,790
effective search space: 1273645590
effective search space used: 1273645590
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)