GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001514-TA|BGIBMGA001514-PA|undefined
         (77 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-76|ABI31125.1|   80|Drosophila melanogaster CG34112-PA ...    27   4.2  
AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-P...    25   9.6  

>AE014297-76|ABI31125.1|   80|Drosophila melanogaster CG34112-PA
          protein.
          Length = 80

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 7  RAQARKRGAADPTLGDGGADLPLRADFTAPPHLT 40
          R++ +KR A D    DGG+      DF   P+LT
Sbjct: 45 RSKNKKRDAVDGKFFDGGSGSGSLQDFEKSPYLT 78


>AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-PA
           protein.
          Length = 2938

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 4   DWGRAQARKRGAADPTLGDGGAD 26
           DW R +A ++G+ D    D G D
Sbjct: 821 DWSRWEAERQGSQDSATKDSGID 843


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.322    0.137    0.448 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,208,786
Number of Sequences: 52641
Number of extensions: 78290
Number of successful extensions: 141
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139
Number of HSP's gapped (non-prelim): 2
length of query: 77
length of database: 24,830,863
effective HSP length: 57
effective length of query: 20
effective length of database: 21,830,326
effective search space: 436606520
effective search space used: 436606520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 53 (25.4 bits)