GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001513-TA|BGIBMGA001513-PA|IPR000209|Peptidase S8 and
S53, subtilisin, kexin, sedolisin, IPR008979|Galactose-binding like,
IPR009020|Proteinase inhibitor, propeptide, IPR009030|Growth factor,
receptor, IPR002884|Proprotein convertase, P
         (1152 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    24   8.2  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    24   8.2  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    24   8.2  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    24   8.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   8.2  

>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
            determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 8.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 1101 KWFYGTNNYNSNIAYN 1116
            K+ Y  NNYN  + YN
Sbjct: 96   KYNYNNNNYNKKLYYN 111


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
            determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 8.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 1101 KWFYGTNNYNSNIAYN 1116
            K+ Y  NNYN  + YN
Sbjct: 96   KYNYNNNNYNKKLYYN 111


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
            determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 8.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 1101 KWFYGTNNYNSNIAYN 1116
            K+ Y  NNYN  + YN
Sbjct: 96   KYNYNNNNYNKKLYYN 111


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
            determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 8.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 1101 KWFYGTNNYNSNIAYN 1116
            K+ Y  NNYN  + YN
Sbjct: 96   KYNYNNNNYNKKLYYN 111


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 8.2
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 307 ATERGDVPWYSEKCSSTLAATYSSGAINENQVVTTDLHH 345
           ATE G    Y+EK S  L   + S  ++ +    +++ H
Sbjct: 475 ATETGTSQMYAEKLSELLGHAFHSQVLSMSDYDISNIEH 513


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.133    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 323,348
Number of Sequences: 429
Number of extensions: 14206
Number of successful extensions: 51
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42
Number of HSP's gapped (non-prelim): 9
length of query: 1152
length of database: 140,377
effective HSP length: 65
effective length of query: 1087
effective length of database: 112,492
effective search space: 122278804
effective search space used: 122278804
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)