BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001513-TA|BGIBMGA001513-PA|IPR000209|Peptidase S8 and S53, subtilisin, kexin, sedolisin, IPR008979|Galactose-binding like, IPR009020|Proteinase inhibitor, propeptide, IPR009030|Growth factor, receptor, IPR002884|Proprotein convertase, P (1152 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g19660.1 68418.m02339 subtilase family protein contains Pfam ... 33 0.84 At3g22780.1 68416.m02872 CXC domain protein (TSO1) identical to ... 32 1.9 At3g04070.1 68416.m00430 no apical meristem (NAM) family protein... 30 7.8 At3g03300.1 68416.m00327 DEAD/DEAH box helicase carpel factory-r... 30 7.8 >At5g19660.1 68418.m02339 subtilase family protein contains Pfam profile: PF00082 subtilase family Length = 1038 Score = 33.5 bits (73), Expect = 0.84 Identities = 55/264 (20%), Positives = 96/264 (36%), Gaps = 34/264 (12%) Query: 125 WREGITGRGVVVTILDDGLETDHPDLVANYDPAASYDVNGLDPDPQPRYDVIDSNRHGTR 184 W++G TG V + I D G+ DHP + N + D + D+ HGT Sbjct: 197 WKKGYTGAKVKMAIFDTGIRADHP-----HFRKIKERTNWTNED-----TLNDNLGHGTF 246 Query: 185 CAGEVAATANNSLCXXXXXXXXXXXXXXMLDGDVTDVVEARSLSLNPQHVDIYSASWGPD 244 AG +A N C D V S +D ++ + D Sbjct: 247 VAGVIA--GRNPECLGFASDTEIYAFRVFTDAQV---------SYTSWFLDAFNYAIATD 295 Query: 245 DD--GKTVDGPGLLATRAFIEGVTKGRNGKGSIFVWASGNGGKEHDNCNCDGYTNSIWTL 302 D ++ GP L F+E V + I V A GN G + N + + + Sbjct: 296 MDVLNLSIGGPDYL-DLPFVEKVWE-ITASNIIMVSAIGNDGPLYGTLNNPADQSDV--I 351 Query: 303 SISSATERGDVPWYSEKCSSTLAATYSSGAINEN------QVVTTDLHHSCTAGHTGTSA 356 + + +S + ST + G + + ++ + + C + +GTS Sbjct: 352 GVGGIDNDDHIASFSSRGMSTWELPHGYGRVKPDVVAYGRDIMGSKISTGCKS-LSGTSV 410 Query: 357 SAPLAAGICALALQANRDLTWRDM 380 ++P+ AGI L + + +D+ Sbjct: 411 ASPVVAGIVCLLVSVIPEARRKDL 434 >At3g22780.1 68416.m02872 CXC domain protein (TSO1) identical to CXC domain protein TSO1 [Arabidopsis thaliana] GI:7767425 Length = 695 Score = 32.3 bits (70), Expect = 1.9 Identities = 16/37 (43%), Positives = 19/37 (51%) Query: 713 FYGTETPAQEQDVSPETNSLGENSRVDTKPWTLSEPE 749 F G+ TP Q QD ET+ EN V+ P L PE Sbjct: 342 FSGSTTPIQSQDTVQETSDQAENEPVEEVPKALVFPE 378 >At3g04070.1 68416.m00430 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAM GB:CAA63101 [Petunia x hybrida] Length = 359 Score = 30.3 bits (65), Expect = 7.8 Identities = 14/48 (29%), Positives = 24/48 (50%) Query: 388 ARPERLSLSGEWRINGVGRNVSHSFGYGLLDASGMVRLAKTWRTVPPQ 435 ARP R + SG W+ G + ++ G G + G+ + +R PP+ Sbjct: 80 ARPNRAAASGYWKATGTDKLIAVPNGEGFHENIGIKKALVFYRGKPPK 127 >At3g03300.1 68416.m00327 DEAD/DEAH box helicase carpel factory-related similar to RNA helicase GB:AAF03534 Length = 1317 Score = 30.3 bits (65), Expect = 7.8 Identities = 12/39 (30%), Positives = 24/39 (61%) Query: 121 VIPAWREGITGRGVVVTILDDGLETDHPDLVANYDPAAS 159 ++ +R G+ V +IL++GL+ +LV +DPA++ Sbjct: 438 IVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASN 476 Database: arabidopsis Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.133 0.412 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 26,947,800 Number of Sequences: 28952 Number of extensions: 1147717 Number of successful extensions: 2813 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 2807 Number of HSP's gapped (non-prelim): 6 length of query: 1152 length of database: 12,070,560 effective HSP length: 89 effective length of query: 1063 effective length of database: 9,493,832 effective search space: 10091943416 effective search space used: 10091943416 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits) S2: 65 (30.3 bits)
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