GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001512-TA|BGIBMGA001512-PA|IPR000719|Protein kinase,
IPR008271|Serine/threonine protein kinase, active site,
IPR011009|Protein kinase-like, IPR002290|Serine/threonine protein
kinase
         (472 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   3.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   4.6  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)

Query: 356 TNTGNWPHSGKATPLTTGHL 375
           T + N PH G  TP+   H+
Sbjct: 178 TKSSNRPHQGPLTPILYDHI 197


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 319 VSGSTGQEIVISPNRDSHQPFNKMG 343
           V G+  +  ++SPNR+ +  F+ MG
Sbjct: 342 VLGNIIESSILSPNRNYYGDFHNMG 366


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.136    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,680
Number of Sequences: 317
Number of extensions: 4515
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 2
length of query: 472
length of database: 114,650
effective HSP length: 59
effective length of query: 413
effective length of database: 95,947
effective search space: 39626111
effective search space used: 39626111
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)